RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 STMN4Q9H169 189 aaPredicted RBP11.66□□□□□ -0.54
TRA2B-212ENST00000480461 KLHL31Q9H511 634 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 NT5DC2Q9H857 520 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 ANGPTL3Q9Y5C1 460 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 PCDHGA7Q9Y5G6 932 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 HEMK1Q9Y5R4 338 aaPredicted RBP11.66□□□□□ -0.54
TRA2B-212ENST00000480461 AP1M2Q9Y6Q5 423 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 SPTBP11277 2137 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 DOPEY2Q9Y3R5 2298 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 HEATR5BQ9P2D3 2071 aa11.66□□□□□ -0.54
TRA2B-212ENST00000480461 HYKKA2RU49 373 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 TM9SF1O15321 606 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 MAP3K7O43318 606 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 DNAJB6O75190 326 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 KIAA0754O94854 1291 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 OR4F21O95013 312 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 ZWINTO95229 277 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 B3GALT4O96024 378 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 RBMS1P29558 406 aaKnown RBP11.65□□□□□ -0.54
TRA2B-212ENST00000480461 NEK2P51955 445 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 RAB15P59190 212 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 NAA25Q14CX7 972 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 TGIF1Q15583 401 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 LIPMQ5VYY2 423 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 LIPJQ5W064 366 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 GRHL2Q6ISB3 625 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 CEACAM20Q6UY09 585 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 FRMD7Q6ZUT3 714 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 TMEM151BQ8IW70 566 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.65□□□□□ -0.54
TRA2B-212ENST00000480461 LAS2Q8IYD9 372 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 OR7G3Q8NG95 312 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 OR8K5Q8NH50 307 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 CCDC126Q96EE4 140 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 THAP11Q96EK4 314 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 C10orf90Q96M02 699 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 ASPSCR1Q9BZE9 553 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 SHCBP1LQ9BZQ2 653 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 FAM117AQ9C073 453 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 C20orf27Q9GZN8 174 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 RHBGQ9H310 441 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 ACTR8Q9H981 624 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 DHCR7Q9UBM7 475 aaKnown RBP11.65□□□□□ -0.54
TRA2B-212ENST00000480461 ZFP69BQ9UJL9 534 aa11.65□□□□□ -0.54
TRA2B-212ENST00000480461 RUVBL1Q9Y265 456 aaKnown RBP11.65□□□□□ -0.54
TRA2B-212ENST00000480461 TMEM184BQ9Y519 407 aaPredicted RBP11.65□□□□□ -0.54
TRA2B-212ENST00000480461 C4orf51C9J302 202 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 H0YIV9 168 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 H3BQF6 201 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 BIRC5O15392 142 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 ZSCAN9O15535 394 aaPredicted RBP11.64□□□□□ -0.55
TRA2B-212ENST00000480461 FOXS1O43638 330 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 ITM2AO43736 263 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 SCRG1O75711 98 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 STK17BO94768 372 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 CLDN9O95484 217 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 DLGAP3O95886 979 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 CHRNGP07510 517 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 SMIM10L1P0DMW3 83 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 RORAP35398 523 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 AHRP35869 848 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 CCNG1P51959 295 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 FOXA1P55317 472 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 CYP4F2P78329 520 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 GPS2Q13227 327 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 ZRSR2Q15696 482 aaKnown RBP11.64□□□□□ -0.55
TRA2B-212ENST00000480461 CPSF6Q16630 551 aaKnown RBP eCLIP11.64□□□□□ -0.55
TRA2B-212ENST00000480461 TCHHL1Q5QJ38 904 aaPredicted RBP11.64□□□□□ -0.55
TRA2B-212ENST00000480461 ZNF385CQ66K41 422 aaPredicted RBP11.64□□□□□ -0.55
TRA2B-212ENST00000480461 TLDC1Q6P9B6 456 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 FAM199XQ6PEV8 388 aaPredicted RBP11.64□□□□□ -0.55
TRA2B-212ENST00000480461 PRSS41Q7RTY9 318 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 UBE3DQ7Z6J8 389 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 MILR1Q7Z6M3 343 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 ASPGQ86U10 573 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 DTX1Q86Y01 620 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 NUDCD3Q8IVD9 361 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 CSNK1A1LQ8N752 337 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 EXD3Q8N9H8 876 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 GALNT6Q8NCL4 622 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 WDR20Q8TBZ3 569 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 MGARPQ8TDB4 240 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 PPP4R1Q8TF05 950 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 ZNF473Q8WTR7 871 aaKnown RBP11.64□□□□□ -0.55
TRA2B-212ENST00000480461 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.64□□□□□ -0.55
TRA2B-212ENST00000480461 SLC13A3Q8WWT9 602 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 ATP6V1E2Q96A05 226 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 MTFMTQ96DP5 389 aaKnown RBP11.64□□□□□ -0.55
TRA2B-212ENST00000480461 SMIM10Q96HG1 83 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 KCNA7Q96RP8 456 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 ZNF382Q96SR6 550 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 ZPBPQ9BS86 351 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 EFCAB11Q9BUY7 163 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 ULBP3Q9BZM4 244 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 SLC22A11Q9NSA0 550 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 FARSBQ9NSD9 589 aaKnown RBP11.64□□□□□ -0.55
TRA2B-212ENST00000480461 ACSL6Q9UKU0 697 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 PCDHB3Q9Y5E6 796 aa11.64□□□□□ -0.55
TRA2B-212ENST00000480461 RELNP78509 3460 aa11.63□□□□□ -0.55
TRA2B-212ENST00000480461 LRIT2A6NDA9 550 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms