RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 FIS1Q9Y3D6 152 aa11.97□□□□□ -0.49
TRAPPC12-218ENST00000479897 CCL27Q9Y4X3 112 aa11.97□□□□□ -0.49
TRAPPC12-218ENST00000479897 USH1CQ9Y6N9 552 aa11.97□□□□□ -0.49
TRAPPC12-218ENST00000479897 SPTBP11277 2137 aa11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 URADA6NGE7 173 aa11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 TMEM150CB9EJG8 249 aa11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 SLC28A1O00337 649 aa11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 SKAP2O75563 359 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 JUNP05412 331 aaKnown RBP11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 VIMP08670 466 aaKnown RBP11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 TROVE2P10155 538 aaKnown RBP eCLIP11.96□□□□□ -0.493e-6■■□□□ 11.8
TRAPPC12-218ENST00000479897 FGF5P12034 268 aa11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 TSFMP43897 325 aaKnown RBP11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 NEK2P51955 445 aa11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 ITGA1P56199 1179 aa11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 VSX2P58304 361 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 STXBP1P61764 594 aaKnown RBP11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 RPS13P62277 151 aaKnown RBP11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 CYP4F2P78329 520 aa11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 MC2RQ01718 297 aa11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 DDX39BQ13838 428 aaKnown RBP11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 IL11RAQ14626 422 aa11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 KCNAB1Q14722 419 aa11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 GPR19Q15760 415 aa11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 PDCD2Q16342 344 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 TMEM35AQ53FP2 167 aa11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 YOD1Q5VVQ6 348 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 GARNL3Q5VVW2 1013 aa11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 KHDRBS2Q5VWX1 349 aaKnown RBP11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 FAM219BQ5XKK7 198 aa11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 CGB2Q6NT52 195 aa11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 TLDC1Q6P9B6 456 aa11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 MAVSQ7Z434 540 aa11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 GALNT15Q8N3T1 639 aa11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 CSNK1A1LQ8N752 337 aa11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 GAL3ST3Q96A11 431 aa11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 NLNQ9BYT8 704 aa11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 TRIM55Q9BYV6 548 aa11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 NSRP1Q9H0G5 558 aaKnown RBP11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 FBXO8Q9NRD0 319 aa11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 NMRK1Q9NWW6 199 aa11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 SIRT5Q9NXA8 310 aa11.96□□□□□ -0.49
TRAPPC12-218ENST00000479897 SPEGQ15772 3267 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 FER1L5A0AVI2 2057 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 GMNCA6NCL1 334 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 LRIT2A6NDA9 550 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 EFCAB7A8K855 629 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 SDHDO14521 159 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 RGS14O43566 566 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 VPS4BO75351 444 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 SCELO95171 688 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 ETHE1O95571 254 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 PRR35P0CG20 571 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 KITP10721 976 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 PTX3P26022 381 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 HNRNPH1P31943 449 aaKnown RBP11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 RAB15P59190 212 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 GRM7Q14831 915 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 SMU1Q2TAY7 513 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 WASHC2DQ5SRD0 308 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 DEPDC1Q5TB30 811 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 TMEM214Q6NUQ4 689 aaKnown RBP11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 NIPAL1Q6NVV3 410 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 Q6ZSR9 355 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 CHSY3Q70JA7 882 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 TMPRSS7Q7RTY8 843 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 ALYREFQ86V81 257 aaKnown RBP11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 DDIASQ8IXT1 998 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 GPR135Q8IZ08 494 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 TTC29Q8NA56 475 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 SRFBP1Q8NEF9 429 aaKnown RBP11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 OR2L5Q8NG80 312 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 OR2T11Q8NH01 316 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 OR1L3Q8NH93 324 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 WDR36Q8NI36 951 aaKnown RBP11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 N4BP2L2Q92802 583 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 MS4A6EQ96DS6 147 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 C11orf24Q96F05 449 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 HBEGFQ99075 208 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 CENPKQ9BS16 269 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 NUF2Q9BZD4 464 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 B3GNT4Q9C0J1 378 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 REXO4Q9GZR2 422 aaKnown RBP11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 AICDAQ9GZX7 198 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 RIC8BQ9NVN3 520 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 OCIAD1Q9NX40 245 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 VPS29Q9UBQ0 182 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 SERTAD3Q9UJW9 196 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 RARRES3Q9UL19 164 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 SRPK3Q9UPE1 567 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 RUVBL1Q9Y265 456 aaKnown RBP11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 LOXL2Q9Y4K0 774 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 SLC22A7Q9Y694 548 aa11.95□□□□□ -0.5
TRAPPC12-218ENST00000479897 CFAP54Q96N23 3096 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 PLD2O14939 933 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 LSM1O15116 133 aaKnown RBP11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 HYAL3O43820 417 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 OR2B3O76000 313 aa11.94□□□□□ -0.5
TRAPPC12-218ENST00000479897 SMIM10L1P0DMW3 83 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms