RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 A0A0G2JLW4 131 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 A0A0U1RQK1 487 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 ZNF320A2RRD8 509 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 DUXAA6NLW8 204 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 CAPN9O14815 690 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 ATP6AP2O75787 350 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 AMBPP02760 352 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 NR1D1P20393 614 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 MSH3P20585 1137 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 MARK3P27448 753 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 EPHA2P29317 976 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 MNDAP41218 407 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 WNT5AP41221 380 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 RPL21P46778 160 aaKnown RBP3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 RGS7P49802 495 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 PTENP60484 403 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 TNK1Q13470 666 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 VEZF1Q14119 521 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 SLMAPQ14BN4 828 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 CCDC6Q16204 474 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 SPDYCQ5MJ68 293 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 CYP4A22Q5TCH4 519 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 CORO6Q6QEF8 472 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 C19orf48Q6RUI8 117 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 C15orf39Q6ZRI6 1047 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 PPP1R42Q7Z4L9 355 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 IQCA1Q86XH1 822 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 RYBPQ8N488 228 aaPredicted RBP3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 ANKRD13CQ8N6S4 541 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 RASGEF1AQ8N9B8 481 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 DMBX1Q8NFW5 382 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 HEXDCQ8WVB3 486 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 NSMAFQ92636 917 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 TAF15Q92804 592 aaKnown RBP eCLIP3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 ZNF583Q96ND8 569 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 GTPBP2Q9BX10 602 aaKnown RBP3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 FUT8Q9BYC5 575 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 PELI2Q9HAT8 420 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 HYPKQ9NX55 129 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 COQ3Q9NZJ6 369 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 TXNDC16Q9P2K2 825 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 DBF4Q9UBU7 674 aaPredicted RBP3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 ACAD8Q9UKU7 415 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 NIP7Q9Y221 180 aaKnown RBP eCLIP3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 WDR83OSQ9Y284 106 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 KCNK7Q9Y2U2 307 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 TP53BP1Q12888 1972 aaPredicted RBP3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 PTPRFP10586 1907 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 AK9Q5TCS8 1911 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 CDHR2Q9BYE9 1310 aa3.68□□□□□ -1.82
CDC42BPA-212ENST00000478573 RTL9Q8NET4 1388 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 A4D1N5 150 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 CASTOR2A6NHX0 329 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 O00370 1275 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 LUC7L3O95232 432 aaKnown RBP3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 PIGNO95427 931 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 SPP1P10451 314 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 IRF2P14316 349 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 MYL6BP14649 208 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 ALDH1B1P30837 517 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 CDKN1AP38936 164 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 MFAP3P55082 362 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 C1QTNF8P60827 252 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 YWHAHQ04917 246 aaPredicted RBP3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 LGALS3BPQ08380 585 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 DMPKQ09013 629 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 ZNF415Q09FC8 603 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 PTGISQ16647 500 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 ODF4Q2M2E3 257 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 ITPRIPL2Q3MIP1 535 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 ANKRD20A4Q4UJ75 823 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 ANKRD20A8PQ5CZ79 823 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 LRRC73Q5JTD7 316 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 ANKRD20A2Q5SQ80 823 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 ANKRD20A1Q5TYW2 823 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 ANKRD20A3Q5VUR7 823 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 SLC27A1Q6PCB7 646 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 TMEM182Q6ZP80 229 aaPredicted RBP3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 ANO5Q75V66 913 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 NRARPQ7Z6K4 114 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 DZIP1Q86YF9 867 aaKnown RBP3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 TMEM139Q8IV31 216 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 C4orf19Q8IY42 314 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 NHLRC2Q8NBF2 726 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 OR1J1Q8NGS3 322 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 GRK7Q8WTQ7 553 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 PROX1Q92786 737 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 ST6GALNAC6Q969X2 333 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 STAMBPL1Q96FJ0 436 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 FAM20AQ96MK3 541 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 ZNF696Q9H7X3 374 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 MIS18AQ9NYP9 233 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 DAPK2Q9UIK4 370 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 ITGA11Q9UKX5 1188 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 SH3TC1Q8TE82 1336 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 FANCIQ9NVI1 1328 aa3.67□□□□□ -1.82
CDC42BPA-212ENST00000478573 RBBP6Q7Z6E9 1792 aaKnown RBP3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 A0A1B0GU03 582 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 YDJCA8MPS7 323 aa3.66□□□□□ -1.82
CDC42BPA-212ENST00000478573 FMO6PO60774 539 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 217.1 ms