RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 CCDC73Q6ZRK6 1079 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 LINC00696Q6ZRV3 163 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 NRARPQ7Z6K4 114 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 RABEPKQ7Z6M1 372 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 SIX6OS1Q8N1H7 587 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 FAM89BQ8N5H3 189 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 C9orf43Q8TAL5 461 aaPredicted RBP3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 PIK3R3Q92569 461 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 PYCR2Q96C36 320 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 POM121L2Q96KW2 1035 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 BTBD9Q96Q07 612 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 CDCA3Q99618 268 aaPredicted RBP3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 MCRIP2Q9BUT9 160 aaKnown RBP3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 NYXQ9GZU5 481 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 COMMD8Q9NX08 183 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 TAS2R3Q9NYW6 316 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 NINJ2Q9NZG7 142 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 ACTR3BQ9P1U1 418 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 CGNQ9P2M7 1197 aaKnown RBP3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 MYH15Q9Y2K3 1946 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 SPAG9O60271 1321 aaKnown RBP3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 CLSPNQ9HAW4 1339 aa3.4□□□□□ -1.87
SMARCA1-204ENST00000478420 A0A087WUV0 522 aaPredicted RBP3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 A0A1W2PRV1 198 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 LRRD1A4D1F6 860 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 PGRMC2O15173 223 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 BAG3O95817 575 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 GBAP04062 536 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 HEXBP07686 556 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 SPP1P10451 314 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 KRT13P13646 458 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 ALDH1B1P30837 517 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 SFTPDP35247 375 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 MMP12P39900 470 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 OPRL1P41146 370 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 CRKLP46109 303 aaKnown RBP3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 NAGLUP54802 743 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 MFAP3P55082 362 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 ADARP55265 1226 aaKnown RBP3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 HMGN5P82970 282 aaKnown RBP3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 GUCY2DQ02846 1103 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 SULT2A1Q06520 285 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 DRP2Q13474 957 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 PTK6Q13882 451 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 EFTUD2Q15029 972 aaKnown RBP eCLIP3.39□□□□□ -1.871e-8■■■■■ 27.2
SMARCA1-204ENST00000478420 SHROOM1Q2M3G4 852 aaPredicted RBP3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 GLIPR1L2Q4G1C9 344 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 IRGCQ6NXR0 463 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 LEKR1Q6ZMV7 388 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 ZNF497Q6ZNH5 498 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 FCRLAQ7L513 359 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 TIGD4Q8IY51 512 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 PEX5LQ8IYB4 626 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 RCOR2Q8IZ40 523 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 SYCP3Q8IZU3 236 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 CCDC63Q8NA47 563 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 FBXO30Q8TB52 745 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 SLC26A7Q8TE54 656 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 RAD54LQ92698 747 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 CORO2AQ92828 525 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 SYAP1Q96A49 352 aaPredicted RBP3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 ZNF486Q96H40 463 aaPredicted RBP3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 VPS39Q96JC1 886 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 KLHL5Q96PQ7 755 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 PRAM1Q96QH2 718 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 USP28Q96RU2 1077 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 PIGQQ9BRB3 760 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 TRIM51Q9BSJ1 452 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 GFRA4Q9GZZ7 299 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 RIMS4Q9H426 269 aaPredicted RBP3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 RNF121Q9H920 327 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 IL1RAPL2Q9NP60 686 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 FANCFQ9NPI8 374 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 FETUBQ9UGM5 382 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 LAMP5Q9UJQ1 280 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 PRDM4Q9UKN5 801 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 IL16Q14005 1332 aa3.39□□□□□ -1.87
SMARCA1-204ENST00000478420 A0A1W2PR80 420 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 HTR3EA5X5Y0 456 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 C17orf105B2RV13 164 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 CCL24O00175 119 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 NTN3O00634 580 aaPredicted RBP3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 RTN2O75298 545 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 SNX4O95219 450 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 PGLSO95336 258 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 VIMP08670 466 aaKnown RBP3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 DPEP1P16444 411 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 CCNA2P20248 432 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 CYP2A7P20853 494 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 IL10P22301 178 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 ELAVL4P26378 380 aaKnown RBP3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 HLA-FP30511 346 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 CASP3P42574 277 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 TSFMP43897 325 aaKnown RBP3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 HUNKP57058 714 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 HILS1P60008 231 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 KRTAP10-6P60371 365 aaPredicted RBP3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 CSNK2BP67870 215 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 CYCSP99999 105 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms