RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 ZNF860A6NHJ4 632 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 SYCE1LA8MT33 242 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 AGPSO00116 658 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 MAP2K7O14733 419 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 CLGNO14967 610 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 ZNF500O60304 480 aaPredicted RBP14.77□□□□□ -0.05
HMGA1-206ENST00000478214 H2AFYO75367 372 aaKnown RBP14.77□□□□□ -0.05
HMGA1-206ENST00000478214 KLHL18O94889 574 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 B3GALT4O96024 378 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 PDGFAP04085 211 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 EPORP19235 508 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 CXCR2P25025 360 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 CNTFP26441 200 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 RGS1Q08116 209 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 RBBP7Q16576 425 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 PDK4Q16654 411 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 DCAF10Q5QP82 559 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 TCTN3Q6NUS6 607 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 KLC3Q6P597 504 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 KIRREL2Q6UWL6 708 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 LRRC70Q7Z2Q7 622 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 AFAP1L2Q8N4X5 818 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 EIF1ADQ8N9N8 165 aaKnown RBP14.77□□□□□ -0.05
HMGA1-206ENST00000478214 TRPV3Q8NET8 790 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 NACC2Q96BF6 587 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 FER1L6-AS2Q96M78 137 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 SLC25A23Q9BV35 468 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 TGIF2Q9GZN2 237 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 SEMA3GQ9NS98 782 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 HCN3Q9P1Z3 774 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 FBXL4Q9UKA2 621 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 NAALAD2Q9Y3Q0 740 aa14.77□□□□□ -0.05
HMGA1-206ENST00000478214 CCDC189A1A4V9 331 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 IDSB3KWA1 339 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 ALOX12BO75342 701 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 RDH16O75452 317 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 JRKO75564 520 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 CEACAM4O75871 244 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 BMP10O95393 424 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 IGHEP01854 428 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 SNRPAP09012 282 aaKnown RBP14.76□□□□□ -0.05
HMGA1-206ENST00000478214 ZNF888P0CJ79 500 aaPredicted RBP14.76□□□□□ -0.05
HMGA1-206ENST00000478214 GFAPP14136 432 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 CD22P20273 847 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 HNF4AP41235 474 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 EMP2P54851 167 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 HYAL2Q12891 473 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 RAPSNQ13702 412 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 DOC2AQ14183 400 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 PFKFB4Q16877 469 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 DEFB134Q4QY38 66 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 XKR6Q5GH73 641 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 ADGRD1Q6QNK2 874 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 TMIGD1Q6UXZ0 262 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 ASB18Q6ZVZ8 466 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 ZNF605Q86T29 641 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.76□□□□□ -0.05
HMGA1-206ENST00000478214 CLEC1AQ8NC01 280 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 FDCSPQ8NFU4 85 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 OR51Q1Q8NH59 317 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 CREB3L4Q8TEY5 395 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 UBTD2Q8WUN7 234 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 SLC6A16Q9GZN6 736 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 AICDAQ9GZX7 198 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 KLHL31Q9H511 634 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 ANKZF1Q9H8Y5 726 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 C14orf105Q9NVL8 296 aa14.76□□□□□ -0.05
HMGA1-206ENST00000478214 PCDHGA9Q9Y5G4 932 aaKnown RBP14.76□□□□□ -0.05
HMGA1-206ENST00000478214 LRRC14BA6NHZ5 514 aa14.75□□□□□ -0.05
HMGA1-206ENST00000478214 K7EPI3 171 aa14.75□□□□□ -0.05
HMGA1-206ENST00000478214 HEXBP07686 556 aa14.75□□□□□ -0.05
HMGA1-206ENST00000478214 SERPINA6P08185 405 aa14.75□□□□□ -0.05
HMGA1-206ENST00000478214 ALOX12P18054 663 aa14.75□□□□□ -0.05
HMGA1-206ENST00000478214 TNFRSF8P28908 595 aa14.75□□□□□ -0.05
HMGA1-206ENST00000478214 XCR1P46094 333 aa14.75□□□□□ -0.05
HMGA1-206ENST00000478214 EFNA3P52797 238 aa14.75□□□□□ -0.05
HMGA1-206ENST00000478214 RAB8AP61006 207 aa14.75□□□□□ -0.05
HMGA1-206ENST00000478214 HERC3Q15034 1050 aa14.75□□□□□ -0.05
HMGA1-206ENST00000478214 TECRLQ5HYJ1 363 aa14.75□□□□□ -0.05
HMGA1-206ENST00000478214 LGSNQ5TDP6 509 aa14.75□□□□□ -0.05
HMGA1-206ENST00000478214 FAAH2Q6GMR7 532 aa14.75□□□□□ -0.05
HMGA1-206ENST00000478214 KRT78Q8N1N4 520 aa14.75□□□□□ -0.05
HMGA1-206ENST00000478214 OR11G2Q8NGC1 345 aa14.75□□□□□ -0.05
HMGA1-206ENST00000478214 OR5T3Q8NGG3 340 aa14.75□□□□□ -0.05
HMGA1-206ENST00000478214 UTP15Q8TED0 518 aaKnown RBP14.75□□□□□ -0.05
HMGA1-206ENST00000478214 C8orf44Q96CB5 159 aa14.75□□□□□ -0.05
HMGA1-206ENST00000478214 WDR34Q96EX3 536 aa14.75□□□□□ -0.05
HMGA1-206ENST00000478214 NUDT9Q9BW91 350 aa14.75□□□□□ -0.05
HMGA1-206ENST00000478214 EHD1Q9H4M9 534 aa14.75□□□□□ -0.05
HMGA1-206ENST00000478214 NT5DC2Q9H857 520 aa14.75□□□□□ -0.05
HMGA1-206ENST00000478214 MLXIPLQ9NP71 852 aa14.75□□□□□ -0.05
HMGA1-206ENST00000478214 ATP13A2Q9NQ11 1180 aa14.75□□□□□ -0.05
HMGA1-206ENST00000478214 CPSF2Q9P2I0 782 aaKnown RBP14.75□□□□□ -0.05
HMGA1-206ENST00000478214 COPG2Q9UBF2 871 aa14.75□□□□□ -0.05
HMGA1-206ENST00000478214 OPTCQ9UBM4 332 aa14.75□□□□□ -0.05
HMGA1-206ENST00000478214 MKL2Q9ULH7 1088 aa14.75□□□□□ -0.05
HMGA1-206ENST00000478214 HEMK1Q9Y5R4 338 aaPredicted RBP14.75□□□□□ -0.05
HMGA1-206ENST00000478214 C4orf51C9J302 202 aa14.74□□□□□ -0.05
HMGA1-206ENST00000478214 KLK8O60259 260 aa14.74□□□□□ -0.05
HMGA1-206ENST00000478214 GALR3O60755 368 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms