RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 GNG10P50151 68 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 VAV2P52735 878 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 PDE1AP54750 535 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 ELLP55199 621 aaPredicted RBP3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 PEX3P56589 373 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 RHAGQ02094 409 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 CSTF1Q05048 431 aaKnown RBP3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 KLF10Q13118 480 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 STX5Q13190 355 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 NAB1Q13506 487 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 TP53BP2Q13625 1128 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 FHL2Q14192 279 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 GPR176Q14439 515 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 PDK3Q15120 406 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 ETFDHQ16134 617 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 CAMK4Q16566 473 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 GOLGA7BQ2TAP0 167 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 ARHGAP15Q53QZ3 475 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 ACTBL2Q562R1 376 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 KHDC1LQ5JSQ8 128 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 TCHHL1Q5QJ38 904 aaPredicted RBP3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 CCNYL2Q5T2Q4 361 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 PDZK1Q5T2W1 519 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 ABHD17BQ5VST6 288 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 WSCD1Q658N2 575 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 KIAA0408Q6ZU52 694 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 CYP4V2Q6ZWL3 525 aaPredicted RBP3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 SLC26A9Q7LBE3 791 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 ADCK2Q7Z695 626 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 VTCN1Q7Z7D3 282 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 RTN4RL2Q86UN3 420 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 ERICH1Q86X53 443 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 CNGA4Q8IV77 575 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 NUDCD3Q8IVD9 361 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 ZDHHC21Q8IVQ6 265 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 SIAH3Q8IW03 269 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 FAM185AQ8N0U4 392 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 CLYBLQ8N0X4 340 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 BATF2Q8N1L9 274 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 THEM5Q8N1Q8 247 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 LCORLQ8N3X6 602 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 TRAM1L1Q8N609 369 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 ANKRD13CQ8N6S4 541 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 L3MBTL4Q8NA19 623 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 Q8NA96 180 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 GATSQ8NAP1 163 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 ABHD11Q8NFV4 315 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 OR4K14Q8NGD5 310 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 OR10T2Q8NGX3 314 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 PROX1Q92786 737 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 HAS2Q92819 552 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 MYDGFQ969H8 173 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 TMEM143Q96AN5 459 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 MCUR1Q96AQ8 359 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 CCDC127Q96BQ5 260 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 FBXL20Q96IG2 436 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 MRGPRX1Q96LB2 322 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 ZNF48Q96MX3 618 aaPredicted RBP3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 ZNF578Q96N58 590 aaPredicted RBP3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 SPATA13Q96N96 652 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 CASD1Q96PB1 797 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 VPS35Q96QK1 796 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 ZNF607Q96SK3 696 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 CYP2S1Q96SQ9 504 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 SMOQ99835 787 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 FAM110AQ9BQ89 295 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 VKORC1Q9BQB6 163 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 BPIFA3Q9BQP9 254 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 WDR83Q9BRX9 315 aaKnown RBP3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 PIMREGQ9BSJ6 248 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 INPP5KQ9BT40 448 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 NUP58Q9BVL2 599 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 ZNF416Q9BWM5 594 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 PAPOLGQ9BWT3 736 aaKnown RBP3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 RAB17Q9H0T7 212 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 P2RY12Q9H244 342 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 SMOC2Q9H3U7 446 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 FBXO44Q9H4M3 255 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 PDZD7Q9H5P4 517 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 CSNK1G1Q9HCP0 422 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 SLC40A1Q9NP59 571 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 SEMA4BQ9NPR2 832 aaPredicted RBP3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 TUBG2Q9NRH3 451 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 SAMSN1Q9NSI8 373 aaKnown RBP3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 SETD4Q9NVD3 440 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 OSER1Q9NX31 292 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 RHBDL2Q9NX52 303 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 SYBUQ9NX95 663 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 MTMR4Q9NYA4 1195 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 GTSE1Q9NYZ3 720 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 CTTNBP2NLQ9P2B4 639 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 STOX2Q9P2F5 926 aaPredicted RBP3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 FBXW2Q9UKT8 454 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 AMFRQ9UKV5 643 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 PSMD13Q9UNM6 376 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 ABCG2Q9UNQ0 655 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 KCNE2Q9Y6J6 123 aa3.39□□□□□ -1.87
FNDC3B-209ENST00000478016 CSNK1G3Q9Y6M4 447 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms