RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 MEI1Q5TIA1 1274 aa18.95■□□□□ 0.62
PDLIM1-202ENST00000477757 CNGA4Q8IV77 575 aa18.95■□□□□ 0.62
PDLIM1-202ENST00000477757 LRRC56Q8IYG6 542 aaPredicted RBP18.95■□□□□ 0.62
PDLIM1-202ENST00000477757 OR5M3Q8NGP4 307 aa18.95■□□□□ 0.62
PDLIM1-202ENST00000477757 FAM136AQ96C01 138 aa18.95■□□□□ 0.62
PDLIM1-202ENST00000477757 MBD6Q96DN6 1003 aa18.95■□□□□ 0.62
PDLIM1-202ENST00000477757 CLEC4MQ9H2X3 399 aaPredicted RBP18.95■□□□□ 0.62
PDLIM1-202ENST00000477757 ETNK1Q9HBU6 452 aa18.95■□□□□ 0.62
PDLIM1-202ENST00000477757 CHRAC1Q9NRG0 131 aa18.95■□□□□ 0.62
PDLIM1-202ENST00000477757 TREX1Q9NSU2 369 aa18.95■□□□□ 0.62
PDLIM1-202ENST00000477757 ABCF3Q9NUQ8 709 aa18.95■□□□□ 0.62
PDLIM1-202ENST00000477757 EDARQ9UNE0 448 aa18.95■□□□□ 0.62
PDLIM1-202ENST00000477757 H3BMM5 538 aa18.94■□□□□ 0.62
PDLIM1-202ENST00000477757 FCHO1O14526 889 aa18.94■□□□□ 0.62
PDLIM1-202ENST00000477757 CBFA2T2O43439 604 aa18.94■□□□□ 0.62
PDLIM1-202ENST00000477757 PTMAP06454 111 aaKnown RBP18.94■□□□□ 0.62
PDLIM1-202ENST00000477757 KLHL38Q2WGJ6 581 aa18.94■□□□□ 0.62
PDLIM1-202ENST00000477757 ACSBG2Q5FVE4 666 aa18.94■□□□□ 0.62
PDLIM1-202ENST00000477757 THEMIS2Q5TEJ8 643 aa18.94■□□□□ 0.62
PDLIM1-202ENST00000477757 ZZZ3Q8IYH5 903 aa18.94■□□□□ 0.62
PDLIM1-202ENST00000477757 CAMKVQ8NCB2 501 aa18.94■□□□□ 0.62
PDLIM1-202ENST00000477757 FBXO15Q8NCQ5 510 aaPredicted RBP18.94■□□□□ 0.62
PDLIM1-202ENST00000477757 LPGAT1Q92604 370 aa18.94■□□□□ 0.62
PDLIM1-202ENST00000477757 THAP11Q96EK4 314 aa18.94■□□□□ 0.62
PDLIM1-202ENST00000477757 PEX11GQ96HA9 241 aa18.94■□□□□ 0.62
PDLIM1-202ENST00000477757 GPATCH1Q9BRR8 931 aaKnown RBP18.94■□□□□ 0.62
PDLIM1-202ENST00000477757 SLC6A16Q9GZN6 736 aa18.94■□□□□ 0.62
PDLIM1-202ENST00000477757 NAALAD2Q9Y3Q0 740 aa18.94■□□□□ 0.62
PDLIM1-202ENST00000477757 PCDHA13Q9Y5I0 950 aa18.94■□□□□ 0.62
PDLIM1-202ENST00000477757 E7EVH7 732 aa18.93■□□□□ 0.62
PDLIM1-202ENST00000477757 ESR1P03372 595 aa18.93■□□□□ 0.62
PDLIM1-202ENST00000477757 HRH2P25021 359 aa18.93■□□□□ 0.62
PDLIM1-202ENST00000477757 FMO4P31512 558 aa18.93■□□□□ 0.62
PDLIM1-202ENST00000477757 FDFT1P37268 417 aa18.93■□□□□ 0.62
PDLIM1-202ENST00000477757 KCNJ11Q14654 390 aa18.93■□□□□ 0.62
PDLIM1-202ENST00000477757 KCT2Q8NC54 265 aa18.93■□□□□ 0.62
PDLIM1-202ENST00000477757 OR52N2Q8NGI0 321 aa18.93■□□□□ 0.62
PDLIM1-202ENST00000477757 TM4SF19Q96DZ7 209 aa18.93■□□□□ 0.62
PDLIM1-202ENST00000477757 CCDC138Q96M89 665 aa18.93■□□□□ 0.62
PDLIM1-202ENST00000477757 RASSF1Q9NS23 344 aa18.93■□□□□ 0.62
PDLIM1-202ENST00000477757 TMEM184CQ9NVA4 438 aa18.93■□□□□ 0.62
PDLIM1-202ENST00000477757 SLC22A7Q9Y694 548 aa18.93■□□□□ 0.62
PDLIM1-202ENST00000477757 ZNF860A6NHJ4 632 aa18.92■□□□□ 0.62
PDLIM1-202ENST00000477757 SAGE2PA6NJ88 616 aa18.92■□□□□ 0.62
PDLIM1-202ENST00000477757 PDE9AO76083 593 aa18.92■□□□□ 0.62
PDLIM1-202ENST00000477757 FHP07954 510 aa18.92■□□□□ 0.62
PDLIM1-202ENST00000477757 ADARP55265 1226 aaKnown RBP18.92■□□□□ 0.62
PDLIM1-202ENST00000477757 TYSND1Q2T9J0 566 aa18.92■□□□□ 0.62
PDLIM1-202ENST00000477757 PCID2Q5JVF3 399 aa18.92■□□□□ 0.62
PDLIM1-202ENST00000477757 RNF187Q5TA31 235 aaPredicted RBP18.92■□□□□ 0.62
PDLIM1-202ENST00000477757 ARSKQ6UWY0 536 aa18.92■□□□□ 0.62
PDLIM1-202ENST00000477757 CAMKMTQ7Z624 323 aa18.92■□□□□ 0.62
PDLIM1-202ENST00000477757 REXO1L1PQ8IX06 675 aa18.92■□□□□ 0.62
PDLIM1-202ENST00000477757 CYP4Z2PQ8N1L4 340 aa18.92■□□□□ 0.62
PDLIM1-202ENST00000477757 OTUD6BQ8N6M0 293 aa18.92■□□□□ 0.62
PDLIM1-202ENST00000477757 OR5T3Q8NGG3 340 aa18.92■□□□□ 0.62
PDLIM1-202ENST00000477757 CALR3Q96L12 384 aaKnown RBP18.92■□□□□ 0.62
PDLIM1-202ENST00000477757 GALPQ9UBC7 116 aa18.92■□□□□ 0.62
PDLIM1-202ENST00000477757 FN1P02751 2386 aaKnown RBP18.92■□□□□ 0.62
PDLIM1-202ENST00000477757 DNAJC13O75165 2243 aa18.92■□□□□ 0.62
PDLIM1-202ENST00000477757 ZNF407Q9C0G0 2248 aa18.91■□□□□ 0.62
PDLIM1-202ENST00000477757 JAK1P23458 1154 aa18.91■□□□□ 0.62
PDLIM1-202ENST00000477757 ACVR2AP27037 513 aa18.91■□□□□ 0.62
PDLIM1-202ENST00000477757 ARNTP27540 789 aa18.91■□□□□ 0.62
PDLIM1-202ENST00000477757 COILP38432 576 aaPredicted RBP18.91■□□□□ 0.62
PDLIM1-202ENST00000477757 NR0B1P51843 470 aaKnown RBP18.91■□□□□ 0.62
PDLIM1-202ENST00000477757 DGKQP52824 942 aa18.91■□□□□ 0.62
PDLIM1-202ENST00000477757 GPR85P60893 370 aa18.91■□□□□ 0.62
PDLIM1-202ENST00000477757 TAOK1Q7L7X3 1001 aa18.91■□□□□ 0.62
PDLIM1-202ENST00000477757 ASPGQ86U10 573 aa18.91■□□□□ 0.62
PDLIM1-202ENST00000477757 TBC1D20Q96BZ9 403 aa18.91■□□□□ 0.62
PDLIM1-202ENST00000477757 FAM129AQ9BZQ8 928 aa18.91■□□□□ 0.62
PDLIM1-202ENST00000477757 PNPLA3Q9NST1 481 aa18.91■□□□□ 0.62
PDLIM1-202ENST00000477757 SCN3AQ9NY46 2000 aa18.91■□□□□ 0.62
PDLIM1-202ENST00000477757 AKR1B15C9JRZ8 316 aaPredicted RBP18.9■□□□□ 0.62
PDLIM1-202ENST00000477757 SYF2O95926 243 aaKnown RBP18.9■□□□□ 0.62
PDLIM1-202ENST00000477757 CHRM3P20309 590 aa18.9■□□□□ 0.62
PDLIM1-202ENST00000477757 IMPA1P29218 277 aa18.9■□□□□ 0.62
PDLIM1-202ENST00000477757 ZFP36L2P47974 494 aaKnown RBP18.9■□□□□ 0.62
PDLIM1-202ENST00000477757 CRADDP78560 199 aa18.9■□□□□ 0.62
PDLIM1-202ENST00000477757 SLC25A35Q3KQZ1 300 aa18.9■□□□□ 0.62
PDLIM1-202ENST00000477757 MRNIPQ6NTE8 343 aa18.9■□□□□ 0.62
PDLIM1-202ENST00000477757 PAOXQ6QHF9 649 aa18.9■□□□□ 0.62
PDLIM1-202ENST00000477757 PAMR1Q6UXH9 720 aa18.9■□□□□ 0.62
PDLIM1-202ENST00000477757 MDGA2Q7Z553 956 aa18.9■□□□□ 0.62
PDLIM1-202ENST00000477757 SLC26A11Q86WA9 606 aa18.9■□□□□ 0.62
PDLIM1-202ENST00000477757 AFAP1L2Q8N4X5 818 aa18.9■□□□□ 0.62
PDLIM1-202ENST00000477757 NFAM1Q8NET5 270 aaPredicted RBP18.9■□□□□ 0.62
PDLIM1-202ENST00000477757 OR10Q1Q8NGQ4 319 aa18.9■□□□□ 0.62
PDLIM1-202ENST00000477757 SMR3AQ99954 134 aa18.9■□□□□ 0.62
PDLIM1-202ENST00000477757 TTYH2Q9BSA4 534 aa18.9■□□□□ 0.62
PDLIM1-202ENST00000477757 DEFB126Q9BYW3 111 aa18.9■□□□□ 0.62
PDLIM1-202ENST00000477757 DEFB127Q9H1M4 99 aa18.9■□□□□ 0.62
PDLIM1-202ENST00000477757 FAM215AQ9Y5M1 114 aa18.9■□□□□ 0.62
PDLIM1-202ENST00000477757 A0A0G2JNJ9 132 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 TCRBV7S2A1N4TA0A589 114 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 FEZF1A0PJY2 475 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 FIGNL2A6NMB9 653 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 NPIPA2E9PIF3 369 aa18.89■□□□□ 0.61
PDLIM1-202ENST00000477757 NPIPA3F8WFD2 350 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms