RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 PACSIN1Q9BY11 444 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 ADGRE3Q9BY15 652 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 PITPNM3Q9BZ71 974 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 SPRTNQ9H040 489 aaPredicted RBP4.4□□□□□ -1.71
CKS1B-207ENST00000477676 ENKD1Q9H0I2 346 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 KIR3DX1Q9H7L2 352 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 GLOD4Q9HC38 313 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 MRPL47Q9HD33 250 aaKnown RBP4.4□□□□□ -1.71
CKS1B-207ENST00000477676 IMP3Q9NV31 184 aaKnown RBP4.4□□□□□ -1.71
CKS1B-207ENST00000477676 SOHLH2Q9NX45 425 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 P4HTMQ9NXG6 502 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 C5AR2Q9P296 337 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 IP6K2Q9UHH9 426 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 ENTPD4Q9Y227 616 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 CDYLQ9Y232 598 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 OSGIN2Q9Y236 505 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 COPG1Q9Y678 874 aaKnown RBP4.4□□□□□ -1.71
CKS1B-207ENST00000477676 JMJD1CQ15652 2540 aa4.4□□□□□ -1.71
CKS1B-207ENST00000477676 FBN3Q75N90 2809 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 MGAT4DA6NG13 374 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 MYO1FO00160 1098 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 HNRNPRO43390 633 aaKnown RBP4.39□□□□□ -1.71
CKS1B-207ENST00000477676 DNAJC8O75937 253 aaPredicted RBP4.39□□□□□ -1.71
CKS1B-207ENST00000477676 NCR1O76036 304 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 PROSCO94903 275 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 POLBP06746 335 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 KLK3P07288 261 aaPredicted RBP4.39□□□□□ -1.71
CKS1B-207ENST00000477676 TPM2P07951 284 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 CCDC172P0C7W6 258 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 PRSS56P0CW18 603 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 PECAM1P16284 738 aaPredicted RBP4.39□□□□□ -1.71
CKS1B-207ENST00000477676 CDH3P22223 829 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 CA4P22748 312 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 PDHA2P29803 388 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 PEBP1P30086 187 aaKnown RBP4.39□□□□□ -1.71
CKS1B-207ENST00000477676 PBX1P40424 430 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 HALP42357 657 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 CDKN1CP49918 316 aaPredicted RBP4.39□□□□□ -1.71
CKS1B-207ENST00000477676 TDGF1P3P51864 188 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 RIPPLY3P57055 190 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 TMPRSS15P98073 1019 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 XIAPP98170 497 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 PDE1BQ01064 536 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 NHLH2Q02577 135 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 AP1B1Q10567 949 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 ZNF460Q14592 562 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 PDK2Q15119 407 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 TEX44Q53QW1 395 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 FNBP1LQ5T0N5 605 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 MLIPQ5VWP3 458 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 ZNF324BQ6AW86 544 aaPredicted RBP4.39□□□□□ -1.71
CKS1B-207ENST00000477676 IGFL2Q6UWQ7 119 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 CLEC17AQ6ZS10 378 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 COX15Q7KZN9 410 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 OOSP2Q86WS3 158 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 CXorf67Q86X51 503 aaPredicted RBP4.39□□□□□ -1.71
CKS1B-207ENST00000477676 HPS6Q86YV9 775 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 SLC34A3Q8N130 599 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 SLC25A41Q8N5S1 370 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 LMNTD1Q8N9Z9 388 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 KCTD6Q8NC69 237 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 OR2L2Q8NH16 312 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 GDAP1Q8TB36 358 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 DTX3LQ8TDB6 740 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 CPT1BQ92523 772 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 LINC00615Q96LM1 132 aaPredicted RBP4.39□□□□□ -1.71
CKS1B-207ENST00000477676 TEKT5Q96M29 485 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 CLUHP3Q96NS8 147 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 TAAR6Q96RI8 345 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 SLX1AQ9BQ83 275 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 SOX7Q9BT81 388 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 OR52A5Q9H2C5 316 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 PRDM13Q9H4Q3 707 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 XKR8Q9H6D3 395 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 SPHK1Q9NYA1 384 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 DHCR7Q9UBM7 475 aaKnown RBP4.39□□□□□ -1.71
CKS1B-207ENST00000477676 PTRH2Q9Y3E5 179 aaKnown RBP4.39□□□□□ -1.71
CKS1B-207ENST00000477676 HEY1Q9Y5J3 304 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 ARL5AQ9Y689 179 aa4.39□□□□□ -1.71
CKS1B-207ENST00000477676 GLYATL1P3A0A0U1RQE8 302 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 GSAPA4D1B5 854 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 AGAP14A8MT82 685 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 AHRRA9YTQ3 701 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 HMGB1P1B2RPK0 211 aaPredicted RBP4.38□□□□□ -1.71
CKS1B-207ENST00000477676 PRSS44E7EML9 344 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 C19orf84I3L1E1 186 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 CCL22O00626 93 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 SOCS6O14544 535 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 PRAMEF4O60810 478 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 KCNJ13O60928 360 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 AGTP01019 485 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 STSP08842 583 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 VCLP18206 1134 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 HLA-DPA1P20036 260 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 CYP2A7P20853 494 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 PTMSP20962 102 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 SPAM1P38567 509 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 HADHAP40939 763 aa4.38□□□□□ -1.71
CKS1B-207ENST00000477676 SSR1P43307 286 aaKnown RBP4.38□□□□□ -1.71
CKS1B-207ENST00000477676 KCNK10P57789 538 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms