RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 KIF5CO60282 957 aa5.23□□□□□ -1.57
VPS50-212ENST00000476413 SLC2A2P11168 524 aaPredicted RBP5.23□□□□□ -1.57
VPS50-212ENST00000476413 MAP2K2P36507 400 aa5.23□□□□□ -1.57
VPS50-212ENST00000476413 ATP6V1E1P36543 226 aa5.23□□□□□ -1.57
VPS50-212ENST00000476413 OR3A3P47888 321 aa5.23□□□□□ -1.57
VPS50-212ENST00000476413 CSNK2BP67870 215 aa5.23□□□□□ -1.57
VPS50-212ENST00000476413 ABRQ12979 859 aa5.23□□□□□ -1.57
VPS50-212ENST00000476413 CBX3Q13185 183 aa5.23□□□□□ -1.57
VPS50-212ENST00000476413 STXBP2Q15833 593 aa5.23□□□□□ -1.57
VPS50-212ENST00000476413 IFI44LQ53G44 452 aa5.23□□□□□ -1.57
VPS50-212ENST00000476413 PSRC1Q6PGN9 363 aaPredicted RBP5.23□□□□□ -1.57
VPS50-212ENST00000476413 RTL3Q8N8U3 475 aaKnown RBP5.23□□□□□ -1.57
VPS50-212ENST00000476413 SMYD1Q8NB12 490 aa5.23□□□□□ -1.57
VPS50-212ENST00000476413 GATAD1Q8WUU5 269 aa5.23□□□□□ -1.57
VPS50-212ENST00000476413 TMEM190Q8WZ59 177 aa5.23□□□□□ -1.57
VPS50-212ENST00000476413 RFT1Q96AA3 541 aa5.23□□□□□ -1.57
VPS50-212ENST00000476413 ZNF501Q96CX3 271 aaPredicted RBP5.23□□□□□ -1.57
VPS50-212ENST00000476413 LGALS12Q96DT0 336 aa5.23□□□□□ -1.57
VPS50-212ENST00000476413 THAP9Q9H5L6 903 aa5.23□□□□□ -1.57
VPS50-212ENST00000476413 MAGEF1Q9HAY2 307 aa5.23□□□□□ -1.57
VPS50-212ENST00000476413 PPANQ9NQ55 473 aaKnown RBP5.23□□□□□ -1.57
VPS50-212ENST00000476413 C2orf42Q9NWW7 574 aa5.23□□□□□ -1.57
VPS50-212ENST00000476413 ELF5Q9UKW6 265 aaPredicted RBP5.23□□□□□ -1.57
VPS50-212ENST00000476413 ITM2BQ9Y287 266 aa5.23□□□□□ -1.57
VPS50-212ENST00000476413 IGHV4-4A0A075B6R2 117 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 GTPBP10A4D1E9 387 aaKnown RBP5.22□□□□□ -1.57
VPS50-212ENST00000476413 PCDH7O60245 1069 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 SAP30O75446 220 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 ZNF432O94892 652 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 P4HA1P13674 534 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 CEACAM1P13688 526 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 GNB3P16520 340 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 STMN1P16949 149 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 OR3A2P47893 321 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 LEPRP48357 1165 aaKnown RBP5.22□□□□□ -1.57
VPS50-212ENST00000476413 ARF5P84085 180 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 SP3Q02447 781 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 SLC34A1Q06495 639 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 PTPN14Q15678 1187 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 ARMCX4Q5H9R4 360 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 C9orf50Q5SZB4 431 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 ARHGAP17Q68EM7 881 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 FCRLAQ7L513 359 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 RABEPKQ7Z6M1 372 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 NR2C2APQ86WQ0 139 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 LACC1Q8IV20 430 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 PEX5LQ8IYB4 626 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 OR5AP2Q8NGF4 316 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 CD99L2Q8TCZ2 262 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 FAM218AQ96MZ4 157 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 PRAM1Q96QH2 718 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 FAM49AQ9H0Q0 323 aaPredicted RBP5.22□□□□□ -1.57
VPS50-212ENST00000476413 TSPYL1Q9H0U9 437 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 ZDHHC6Q9H6R6 413 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 PRMT8Q9NR22 394 aaPredicted RBP5.22□□□□□ -1.57
VPS50-212ENST00000476413 RNF186Q9NXI6 227 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 EPHA6Q9UF33 1036 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 SLC12A6Q9UHW9 1150 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 MAD2L2Q9UI95 211 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 ICAM5Q9UMF0 924 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 ZNF510Q9Y2H8 683 aa5.22□□□□□ -1.57
VPS50-212ENST00000476413 A0A0U1RQG5 324 aaPredicted RBP5.21□□□□□ -1.58
VPS50-212ENST00000476413 SERINC4A6NH21 518 aa5.21□□□□□ -1.58
VPS50-212ENST00000476413 CACNB4O00305 520 aaPredicted RBP5.21□□□□□ -1.58
VPS50-212ENST00000476413 HTATSF1O43719 755 aaKnown RBP5.21□□□□□ -1.58
VPS50-212ENST00000476413 ZBTB14O43829 449 aa5.21□□□□□ -1.58
VPS50-212ENST00000476413 LETM1O95202 739 aaPredicted RBP5.21□□□□□ -1.58
VPS50-212ENST00000476413 MT-ND2P03891 347 aa5.21□□□□□ -1.58
VPS50-212ENST00000476413 CLCN4P51793 760 aa5.21□□□□□ -1.58
VPS50-212ENST00000476413 SMSP52788 366 aa5.21□□□□□ -1.58
VPS50-212ENST00000476413 DCDC1P59894 354 aa5.21□□□□□ -1.58
VPS50-212ENST00000476413 GNB1P62873 340 aa5.21□□□□□ -1.58
VPS50-212ENST00000476413 TEAD2Q15562 447 aa5.21□□□□□ -1.58
VPS50-212ENST00000476413 CCDC6Q16204 474 aa5.21□□□□□ -1.58
VPS50-212ENST00000476413 ACKR1Q16570 336 aa5.21□□□□□ -1.58
VPS50-212ENST00000476413 FFAR4Q5NUL3 377 aa5.21□□□□□ -1.58
VPS50-212ENST00000476413 ZNF410Q86VK4 478 aa5.21□□□□□ -1.58
VPS50-212ENST00000476413 TMEM178AQ8NBL3 297 aa5.21□□□□□ -1.58
VPS50-212ENST00000476413 OR10G8Q8NGN5 311 aa5.21□□□□□ -1.58
VPS50-212ENST00000476413 SUSD6Q92537 303 aa5.21□□□□□ -1.58
VPS50-212ENST00000476413 AZIN2Q96A70 460 aa5.21□□□□□ -1.58
VPS50-212ENST00000476413 NECTIN4Q96NY8 510 aa5.21□□□□□ -1.58
VPS50-212ENST00000476413 GAL3ST4Q96RP7 486 aa5.21□□□□□ -1.58
VPS50-212ENST00000476413 EPYCQ99645 322 aa5.21□□□□□ -1.58
VPS50-212ENST00000476413 DDX50Q9BQ39 737 aaKnown RBP5.21□□□□□ -1.58
VPS50-212ENST00000476413 COMMD8Q9NX08 183 aa5.21□□□□□ -1.58
VPS50-212ENST00000476413 KCNK6Q9Y257 313 aa5.21□□□□□ -1.58
VPS50-212ENST00000476413 FOXA2Q9Y261 457 aaPredicted RBP5.21□□□□□ -1.58
VPS50-212ENST00000476413 DHX29Q7Z478 1369 aaKnown RBP5.2□□□□□ -1.58
VPS50-212ENST00000476413 TMEM129A0AVI4 362 aa5.2□□□□□ -1.58
VPS50-212ENST00000476413 SRRM4A7MD48 611 aaKnown RBP5.2□□□□□ -1.58
VPS50-212ENST00000476413 ZNF732B4DXR9 585 aa5.2□□□□□ -1.58
VPS50-212ENST00000476413 FAM72CH0Y354 149 aa5.2□□□□□ -1.58
VPS50-212ENST00000476413 BCAS2O75934 225 aaPredicted RBP5.2□□□□□ -1.58
VPS50-212ENST00000476413 AMBPP02760 352 aa5.2□□□□□ -1.58
VPS50-212ENST00000476413 ANOS1P23352 680 aa5.2□□□□□ -1.58
VPS50-212ENST00000476413 NT5C2P49902 561 aa5.2□□□□□ -1.58
VPS50-212ENST00000476413 STARD6P59095 220 aa5.2□□□□□ -1.58
VPS50-212ENST00000476413 PDE7AQ13946 482 aa5.2□□□□□ -1.58
VPS50-212ENST00000476413 TMEM132DQ14C87 1099 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms