RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 CTU2Q2VPK5 515 aaKnown RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 CTSL3PQ5NE16 218 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 GPRC6AQ5T6X5 926 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 OR2T5Q6IEZ7 315 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 SDE2Q6IQ49 451 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 NEK5Q6P3R8 708 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 COLGALT2Q8IYK4 626 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 SPARTQ8N0X7 666 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 NAGSQ8N159 534 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 FRMD1Q8N878 549 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 AQP11Q8NBQ7 271 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 GPR26Q8NDV2 337 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 OR10G2Q8NGC3 310 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 OR2T29Q8NH02 315 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 SMAP2Q8WU79 429 aaPredicted RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 SUSD3Q96L08 255 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 COQ7Q99807 217 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 POLR2J2Q9GZM3 115 aaKnown RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 TFB2MQ9H5Q4 396 aaKnown RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 ZNF696Q9H7X3 374 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 IL23AQ9NPF7 189 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 SEMA3GQ9NS98 782 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 MS4A12Q9NXJ0 267 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 H2AFY2Q9P0M6 372 aaPredicted RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 DNAJB9Q9UBS3 223 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 A0A075B6Q4 140 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 AQP12BA6NM10 295 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 H7BY64 318 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 FXYD1O00168 92 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 MEN1O00255 615 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 CASKO14936 926 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 ADAMDEC1O15204 470 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 TGM5O43548 720 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 SSX4O60224 188 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 MMP20O60882 483 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 STC2O76061 302 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 PSKH1P11801 424 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 BPIP17213 487 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 FDXRP22570 491 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 RELAQ04206 551 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 EMX1Q04741 257 aaPredicted RBP4.81□□□□□ -1.64
CCDC39-204ENST00000476379 CACNG1Q06432 222 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 MESP2Q0VG99 397 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 NFATC2Q13469 925 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 SNAPC1Q16533 368 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 PLEKHG6Q3KR16 790 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 CARD16Q5EG05 197 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 ADGRF1Q5T601 910 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 ALG1LQ6GMV1 187 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 ZC3H14Q6PJT7 736 aaKnown RBP4.81□□□□□ -1.64
CCDC39-204ENST00000476379 ZNF852Q6ZMS4 543 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 TICAM1Q8IUC6 712 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 MMAAQ8IVH4 418 aaKnown RBP4.81□□□□□ -1.64
CCDC39-204ENST00000476379 APLFQ8IW19 511 aaPredicted RBP4.81□□□□□ -1.64
CCDC39-204ENST00000476379 AQP12AQ8IXF9 295 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 ABCA7Q8IZY2 2146 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 CELF2-AS1Q8N7Q2 184 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 HJURPQ8NCD3 748 aaPredicted RBP4.81□□□□□ -1.64
CCDC39-204ENST00000476379 OR5D16Q8NGK9 328 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 ACDQ96AP0 544 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 IGSF21Q96ID5 467 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 ZNF597Q96LX8 424 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 PRAP1Q96NZ9 151 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 KXD1Q9BQD3 176 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 FZD3Q9NPG1 666 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 SDR39U1Q9NRG7 319 aaPredicted RBP4.81□□□□□ -1.64
CCDC39-204ENST00000476379 AGPAT4Q9NRZ5 378 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 DNAJC11Q9NVH1 559 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 INTS10Q9NVR2 710 aaKnown RBP4.81□□□□□ -1.64
CCDC39-204ENST00000476379 RLIMQ9NVW2 624 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 ELOVL2Q9NXB9 296 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 SEC14L3Q9UDX4 400 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 ZNF225Q9UK10 706 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 KCNK6Q9Y257 313 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 VPS9D1Q9Y2B5 631 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 GPSM3Q9Y4H4 160 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 TNPO3Q9Y5L0 923 aaKnown RBP4.81□□□□□ -1.64
CCDC39-204ENST00000476379 GPR45Q9Y5Y3 372 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 SPIN1Q9Y657 262 aaPredicted RBP4.81□□□□□ -1.64
CCDC39-204ENST00000476379 PIEZO1Q92508 2521 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 C2orf92A0A1B0GVN3 265 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 HHLA1C9JL84 531 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 OR1F1O43749 312 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 PCDH7O60245 1069 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 RASAL1O95294 804 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 PAPSS2O95340 614 aaPredicted RBP4.81□□□□□ -1.64
CCDC39-204ENST00000476379 OXSR1O95747 527 aaPredicted RBP4.81□□□□□ -1.64
CCDC39-204ENST00000476379 SLC16A8O95907 504 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 UMPSP11172 480 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 ATF6P18850 670 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 PSMB5P28074 263 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 SPAM1P38567 509 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 MAN2A2P49641 1150 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 CRISP3P54108 245 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 PTSQ03393 145 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 IL18Q14116 193 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 C2orf27AQ580R0 203 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 ZNF542PQ5EBM4 170 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 CEP78Q5JTW2 689 aa4.81□□□□□ -1.64
CCDC39-204ENST00000476379 PRAMEF14Q5SWL7 426 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms