RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 HPS6Q86YV9 775 aa20.02■□□□□ 0.8
LIME1-204ENST00000476183 TBC1D19Q8N5T2 526 aa20.02■□□□□ 0.8
LIME1-204ENST00000476183 AMER2Q8N7J2 671 aa20.02■□□□□ 0.8
LIME1-204ENST00000476183 Q8NA96 180 aa20.02■□□□□ 0.8
LIME1-204ENST00000476183 PDPRQ8NCN5 879 aa20.02■□□□□ 0.8
LIME1-204ENST00000476183 CDC42EP4Q9H3Q1 356 aaKnown RBP20.02■□□□□ 0.8
LIME1-204ENST00000476183 ACSS3Q9H6R3 686 aa20.02■□□□□ 0.8
LIME1-204ENST00000476183 ALG9Q9H6U8 611 aa20.02■□□□□ 0.8
LIME1-204ENST00000476183 ZNF160Q9HCG1 818 aa20.02■□□□□ 0.8
LIME1-204ENST00000476183 WWOXQ9NZC7 414 aa20.02■□□□□ 0.8
LIME1-204ENST00000476183 LUZP4Q9P127 313 aa20.02■□□□□ 0.8
LIME1-204ENST00000476183 MKL2Q9ULH7 1088 aa20.02■□□□□ 0.8
LIME1-204ENST00000476183 PLAAQ9Y263 795 aa20.02■□□□□ 0.8
LIME1-204ENST00000476183 A0A1W2PQ72 361 aa20.01■□□□□ 0.79
LIME1-204ENST00000476183 OR2W5A6NFC9 320 aa20.01■□□□□ 0.79
LIME1-204ENST00000476183 PRAMEF4O60810 478 aa20.01■□□□□ 0.79
LIME1-204ENST00000476183 DNAJB6O75190 326 aa20.01■□□□□ 0.79
LIME1-204ENST00000476183 XCR1P46094 333 aa20.01■□□□□ 0.79
LIME1-204ENST00000476183 HSPA7P48741 367 aa20.01■□□□□ 0.79
LIME1-204ENST00000476183 HYAL2Q12891 473 aa20.01■□□□□ 0.79
LIME1-204ENST00000476183 CDC16Q13042 620 aa20.01■□□□□ 0.79
LIME1-204ENST00000476183 RBBP5Q15291 538 aaKnown RBP20.01■□□□□ 0.79
LIME1-204ENST00000476183 CDKL4Q5MAI5 379 aa20.01■□□□□ 0.79
LIME1-204ENST00000476183 PRAMEF9Q5VWM5 478 aa20.01■□□□□ 0.79
LIME1-204ENST00000476183 SLC6A19Q695T7 634 aa20.01■□□□□ 0.79
LIME1-204ENST00000476183 SULT1C3Q6IMI6 304 aa20.01■□□□□ 0.79
LIME1-204ENST00000476183 TMEM205Q6UW68 189 aa20.01■□□□□ 0.79
LIME1-204ENST00000476183 TCAIMQ8N3R3 496 aa20.01■□□□□ 0.79
LIME1-204ENST00000476183 OR5T3Q8NGG3 340 aa20.01■□□□□ 0.79
LIME1-204ENST00000476183 EXT2Q93063 718 aa20.01■□□□□ 0.79
LIME1-204ENST00000476183 MIB2Q96AX9 1013 aa20.01■□□□□ 0.79
LIME1-204ENST00000476183 VPS50Q96JG6 964 aa20.01■□□□□ 0.79
LIME1-204ENST00000476183 CYTH2Q99418 400 aa20.01■□□□□ 0.79
LIME1-204ENST00000476183 FMO2Q99518 471 aa20.01■□□□□ 0.79
LIME1-204ENST00000476183 FUT8Q9BYC5 575 aa20.01■□□□□ 0.79
LIME1-204ENST00000476183 VN1R1Q9GZP7 353 aa20.01■□□□□ 0.79
LIME1-204ENST00000476183 AICDAQ9GZX7 198 aa20.01■□□□□ 0.79
LIME1-204ENST00000476183 CLMPQ9H6B4 373 aa20.01■□□□□ 0.79
LIME1-204ENST00000476183 CD274Q9NZQ7 290 aa20.01■□□□□ 0.79
LIME1-204ENST00000476183 PTBP2Q9UKA9 531 aaKnown RBP20.01■□□□□ 0.79
LIME1-204ENST00000476183 RNF112Q9ULX5 631 aa20.01■□□□□ 0.79
LIME1-204ENST00000476183 ASB1Q9Y576 335 aa20.01■□□□□ 0.79
LIME1-204ENST00000476183 LOC102723996A0A087X1L8 192 aa20■□□□□ 0.79
LIME1-204ENST00000476183 GALR3O60755 368 aaPredicted RBP20■□□□□ 0.79
LIME1-204ENST00000476183 ACSL3O95573 720 aa20■□□□□ 0.79
LIME1-204ENST00000476183 ALPPP05187 535 aa20■□□□□ 0.79
LIME1-204ENST00000476183 ZNF888P0CJ79 500 aaPredicted RBP20■□□□□ 0.79
LIME1-204ENST00000476183 C1GALT1C1LP0DN25 315 aa20■□□□□ 0.79
LIME1-204ENST00000476183 ALOX12P18054 663 aa20■□□□□ 0.79
LIME1-204ENST00000476183 GNAZP19086 355 aa20■□□□□ 0.79
LIME1-204ENST00000476183 TFEBP19484 476 aa20■□□□□ 0.79
LIME1-204ENST00000476183 PHBP35232 272 aa20■□□□□ 0.79
LIME1-204ENST00000476183 IRF9Q00978 393 aa20■□□□□ 0.79
LIME1-204ENST00000476183 RGS1Q08116 209 aa20■□□□□ 0.79
LIME1-204ENST00000476183 HERC3Q15034 1050 aa20■□□□□ 0.79
LIME1-204ENST00000476183 UAP1Q16222 522 aaPredicted RBP20■□□□□ 0.79
LIME1-204ENST00000476183 IGFL3Q6UXB1 125 aa20■□□□□ 0.79
LIME1-204ENST00000476183 NDUFAF7Q7L592 441 aa20■□□□□ 0.79
LIME1-204ENST00000476183 CENPLQ8N0S6 344 aaPredicted RBP20■□□□□ 0.79
LIME1-204ENST00000476183 UTP15Q8TED0 518 aaKnown RBP20■□□□□ 0.79
LIME1-204ENST00000476183 CREB3L4Q8TEY5 395 aa20■□□□□ 0.79
LIME1-204ENST00000476183 NXNL1Q96CM4 212 aa20■□□□□ 0.79
LIME1-204ENST00000476183 THOC3Q96J01 351 aaKnown RBP20■□□□□ 0.79
LIME1-204ENST00000476183 ATOH8Q96SQ7 321 aa20■□□□□ 0.79
LIME1-204ENST00000476183 SLC6A16Q9GZN6 736 aa20■□□□□ 0.79
LIME1-204ENST00000476183 LHPPQ9H008 270 aa20■□□□□ 0.79
LIME1-204ENST00000476183 KLHL31Q9H511 634 aa20■□□□□ 0.79
LIME1-204ENST00000476183 DNAJC11Q9NVH1 559 aa20■□□□□ 0.79
LIME1-204ENST00000476183 SCN2AQ99250 2005 aa20■□□□□ 0.79
LIME1-204ENST00000476183 SHANK1Q9Y566 2161 aa20■□□□□ 0.79
LIME1-204ENST00000476183 IGHV1-45A0A0A0MS14 117 aa19.99■□□□□ 0.79
LIME1-204ENST00000476183 NSG1A0A0A6YYJ2 146 aa19.99■□□□□ 0.79
LIME1-204ENST00000476183 TTLL8A6PVC2 850 aa19.99■□□□□ 0.79
LIME1-204ENST00000476183 C4orf51C9J302 202 aa19.99■□□□□ 0.79
LIME1-204ENST00000476183 STK16O75716 305 aa19.99■□□□□ 0.79
LIME1-204ENST00000476183 IPO13O94829 963 aaKnown RBP19.99■□□□□ 0.79
LIME1-204ENST00000476183 C2P06681 752 aa19.99■□□□□ 0.79
LIME1-204ENST00000476183 LTA4HP09960 611 aaKnown RBP19.99■□□□□ 0.79
LIME1-204ENST00000476183 CXCR2P25025 360 aa19.99■□□□□ 0.79
LIME1-204ENST00000476183 SLBPQ14493 270 aaKnown RBP eCLIP19.99■□□□□ 0.79
LIME1-204ENST00000476183 PCOLCEQ15113 449 aa19.99■□□□□ 0.79
LIME1-204ENST00000476183 DEFB134Q4QY38 66 aa19.99■□□□□ 0.79
LIME1-204ENST00000476183 CEP128Q6ZU80 1094 aa19.99■□□□□ 0.79
LIME1-204ENST00000476183 TBC1D1Q86TI0 1168 aaPredicted RBP19.99■□□□□ 0.79
LIME1-204ENST00000476183 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.99■□□□□ 0.79
LIME1-204ENST00000476183 STAG3L4Q8TBR4 150 aa19.99■□□□□ 0.79
LIME1-204ENST00000476183 KCTD4Q8WVF5 259 aa19.99■□□□□ 0.79
LIME1-204ENST00000476183 PNPLA2Q96AD5 504 aa19.99■□□□□ 0.79
LIME1-204ENST00000476183 TRIM44Q96DX7 344 aaPredicted RBP19.99■□□□□ 0.79
LIME1-204ENST00000476183 RBCK1Q9BYM8 510 aa19.99■□□□□ 0.79
LIME1-204ENST00000476183 CNOT10Q9H9A5 744 aaKnown RBP19.99■□□□□ 0.79
LIME1-204ENST00000476183 NMRAL1Q9HBL8 299 aa19.99■□□□□ 0.79
LIME1-204ENST00000476183 SNX15Q9NRS6 342 aa19.99■□□□□ 0.79
LIME1-204ENST00000476183 GPRC5BQ9NZH0 403 aa19.99■□□□□ 0.79
LIME1-204ENST00000476183 ACOT9Q9Y305 439 aa19.99■□□□□ 0.79
LIME1-204ENST00000476183 ASH1LQ9NR48 2969 aaKnown RBP19.98■□□□□ 0.79
LIME1-204ENST00000476183 UBXN8O00124 270 aa19.98■□□□□ 0.79
LIME1-204ENST00000476183 KLHL41O60662 606 aa19.98■□□□□ 0.79
LIME1-204ENST00000476183 KERAO60938 352 aa19.98■□□□□ 0.79
LIME1-204ENST00000476183 CELA2AP08217 269 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms