RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 CUZD1Q86UP6 607 aa21.12■□□□□ 0.97
MCF2L2-209ENST00000475664 SLC38A9Q8NBW4 561 aa21.12■□□□□ 0.97
MCF2L2-209ENST00000475664 KCT2Q8NC54 265 aa21.12■□□□□ 0.97
MCF2L2-209ENST00000475664 HUS1BQ8NHY5 278 aa21.12■□□□□ 0.97
MCF2L2-209ENST00000475664 GATA6Q92908 595 aa21.12■□□□□ 0.97
MCF2L2-209ENST00000475664 FRG2BQ96QU4 278 aa21.12■□□□□ 0.97
MCF2L2-209ENST00000475664 KCNA7Q96RP8 456 aa21.12■□□□□ 0.97
MCF2L2-209ENST00000475664 NDC1Q9BTX1 674 aa21.12■□□□□ 0.97
MCF2L2-209ENST00000475664 SHCBP1LQ9BZQ2 653 aa21.12■□□□□ 0.97
MCF2L2-209ENST00000475664 SLC6A16Q9GZN6 736 aa21.12■□□□□ 0.97
MCF2L2-209ENST00000475664 CUTCQ9NTM9 273 aa21.12■□□□□ 0.97
MCF2L2-209ENST00000475664 ADGRE2Q9UHX3 823 aa21.12■□□□□ 0.97
MCF2L2-209ENST00000475664 HBQ1P09105 142 aa21.11■□□□□ 0.97
MCF2L2-209ENST00000475664 CD82P27701 267 aa21.11■□□□□ 0.97
MCF2L2-209ENST00000475664 ARSFP54793 590 aa21.11■□□□□ 0.97
MCF2L2-209ENST00000475664 FOXA1P55317 472 aa21.11■□□□□ 0.97
MCF2L2-209ENST00000475664 SNRPNP63162 240 aaKnown RBP21.11■□□□□ 0.97
MCF2L2-209ENST00000475664 FAM214AQ32MH5 1076 aa21.11■□□□□ 0.97
MCF2L2-209ENST00000475664 TBC1D25Q3MII6 688 aa21.11■□□□□ 0.97
MCF2L2-209ENST00000475664 TCHHL1Q5QJ38 904 aaPredicted RBP21.11■□□□□ 0.97
MCF2L2-209ENST00000475664 C10orf62Q5T681 223 aaPredicted RBP21.11■□□□□ 0.97
MCF2L2-209ENST00000475664 RAB3IL1Q8TBN0 382 aa21.11■□□□□ 0.97
MCF2L2-209ENST00000475664 METTL6Q8TCB7 284 aa21.11■□□□□ 0.97
MCF2L2-209ENST00000475664 CCT6BQ92526 530 aa21.11■□□□□ 0.97
MCF2L2-209ENST00000475664 ZNF578Q96N58 590 aaPredicted RBP21.11■□□□□ 0.97
MCF2L2-209ENST00000475664 TMEM121BQ9BXQ6 578 aaPredicted RBP21.11■□□□□ 0.97
MCF2L2-209ENST00000475664 MS4A8Q9BY19 250 aa21.11■□□□□ 0.97
MCF2L2-209ENST00000475664 AICDAQ9GZX7 198 aa21.11■□□□□ 0.97
MCF2L2-209ENST00000475664 EML4Q9HC35 981 aaKnown RBP21.11■□□□□ 0.97
MCF2L2-209ENST00000475664 DMRT3Q9NQL9 472 aa21.11■□□□□ 0.97
MCF2L2-209ENST00000475664 SNX6Q9UNH7 406 aa21.11■□□□□ 0.97
MCF2L2-209ENST00000475664 MRPS2Q9Y399 296 aaKnown RBP21.11■□□□□ 0.97
MCF2L2-209ENST00000475664 IQCJ-SCHIP1C9J366 451 aaPredicted RBP21.1■□□□□ 0.97
MCF2L2-209ENST00000475664 ITM2AO43736 263 aa21.1■□□□□ 0.97
MCF2L2-209ENST00000475664 HMOX2P30519 316 aa21.1■□□□□ 0.97
MCF2L2-209ENST00000475664 RORAP35398 523 aa21.1■□□□□ 0.97
MCF2L2-209ENST00000475664 NEK2P51955 445 aa21.1■□□□□ 0.97
MCF2L2-209ENST00000475664 ABCE1P61221 599 aaKnown RBP21.1■□□□□ 0.97
MCF2L2-209ENST00000475664 BST1Q10588 318 aa21.1■□□□□ 0.97
MCF2L2-209ENST00000475664 STX3Q13277 289 aa21.1■□□□□ 0.97
MCF2L2-209ENST00000475664 DDX39BQ13838 428 aaKnown RBP21.1■□□□□ 0.97
MCF2L2-209ENST00000475664 COL9A2Q14055 689 aaPredicted RBP21.1■□□□□ 0.97
MCF2L2-209ENST00000475664 MUM1Q2TAK8 710 aa21.1■□□□□ 0.97
MCF2L2-209ENST00000475664 TTC19Q6DKK2 380 aaPredicted RBP21.1■□□□□ 0.97
MCF2L2-209ENST00000475664 TRIM42Q8IWZ5 723 aa21.1■□□□□ 0.97
MCF2L2-209ENST00000475664 RNF175Q8N4F7 328 aa21.1■□□□□ 0.97
MCF2L2-209ENST00000475664 LRFN5Q96NI6 719 aa21.1■□□□□ 0.97
MCF2L2-209ENST00000475664 MTERF1Q99551 399 aaKnown RBP21.1■□□□□ 0.97
MCF2L2-209ENST00000475664 SLC7A5P2Q9GIP4 190 aa21.1■□□□□ 0.97
MCF2L2-209ENST00000475664 ELOVL6Q9H5J4 265 aa21.1■□□□□ 0.97
MCF2L2-209ENST00000475664 INTS9Q9NV88 658 aaKnown RBP21.1■□□□□ 0.97
MCF2L2-209ENST00000475664 DHCR7Q9UBM7 475 aaKnown RBP21.1■□□□□ 0.97
MCF2L2-209ENST00000475664 PPT2Q9UMR5 302 aa21.1■□□□□ 0.97
MCF2L2-209ENST00000475664 TIMM22Q9Y584 194 aa21.1■□□□□ 0.97
MCF2L2-209ENST00000475664 LRIT2A6NDA9 550 aa21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 MAGEB17A8MXT2 336 aa21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 FOXE1O00358 373 aaPredicted RBP21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 MANBAO00462 879 aa21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 DSCR3O14972 297 aa21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 LYPLA1O75608 230 aaPredicted RBP21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 HSPA4LO95757 839 aa21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 KRT6AP02538 564 aa21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 KRT6BP04259 564 aa21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 HNRNPH1P31943 449 aaKnown RBP21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 KRT6CP48668 564 aa21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 RPS13P62277 151 aaKnown RBP21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 PHEXP78562 749 aa21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 IFT88Q13099 833 aa21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 MAP7Q14244 749 aa21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 NDUFA9Q16795 377 aa21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 ADPRMQ3LIE5 342 aa21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 TOR1AIP1Q5JTV8 583 aa21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 ZNF385CQ66K41 422 aaPredicted RBP21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 TTLL10Q6ZVT0 673 aa21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 TIPARPQ7Z3E1 657 aaKnown RBP21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 ZFAND4Q86XD8 727 aa21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 GALNT6Q8NCL4 622 aa21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 ZCCHC10Q8TBK6 192 aa21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 PROKR1Q8TCW9 393 aa21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 CLIP3Q96DZ5 547 aa21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 GBP5Q96PP8 586 aa21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 C20orf27Q9GZN8 174 aa21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 KLHL31Q9H511 634 aa21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 ZNF395Q9H8N7 513 aaPredicted RBP21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 FARSBQ9NSD9 589 aaKnown RBP21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 TXLNGQ9NUQ3 528 aa21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 DKK4Q9UBT3 224 aa21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 SLC22A7Q9Y694 548 aa21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 SEC16AO15027 2179 aa21.09■□□□□ 0.97
MCF2L2-209ENST00000475664 CEP295Q9C0D2 2601 aa21.08■□□□□ 0.97
MCF2L2-209ENST00000475664 WDFY3Q8IZQ1 3526 aa21.08■□□□□ 0.97
MCF2L2-209ENST00000475664 TEX51A0A1B0GUA7 166 aa21.08■□□□□ 0.97
MCF2L2-209ENST00000475664 A0A1B0GX78 115 aa21.08■□□□□ 0.97
MCF2L2-209ENST00000475664 STMND1H3BQB6 276 aa21.08■□□□□ 0.97
MCF2L2-209ENST00000475664 AZIN1O14977 448 aa21.08■□□□□ 0.97
MCF2L2-209ENST00000475664 FOXS1O43638 330 aa21.08■□□□□ 0.97
MCF2L2-209ENST00000475664 FGF4P08620 206 aa21.08■□□□□ 0.97
MCF2L2-209ENST00000475664 SMIM10L1P0DMW3 83 aa21.08■□□□□ 0.97
MCF2L2-209ENST00000475664 SLC1A6P48664 564 aa21.08■□□□□ 0.97
MCF2L2-209ENST00000475664 HTR6P50406 440 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms