RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 DNAJB13P59910 316 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 ERVPABLB-1P60509 514 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 ACY1Q03154 408 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 GPS2Q13227 327 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 CHIT1Q13231 466 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 SLBPQ14493 270 aaKnown RBP eCLIP6.66□□□□□ -1.34
LIMD1-204ENST00000474665 TGIF1Q15583 401 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 TBCCQ15814 346 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 HKDC1Q2TB90 917 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 XKR6Q5GH73 641 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 WASHC2DQ5SRD0 308 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 TMTC4Q5T4D3 741 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 AGBL2Q5U5Z8 902 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 LETMD1Q6P1Q0 360 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 METTL2BQ6P1Q9 378 aaKnown RBP6.66□□□□□ -1.34
LIMD1-204ENST00000474665 ZNF517Q6ZMY9 492 aaPredicted RBP6.66□□□□□ -1.34
LIMD1-204ENST00000474665 ADCK2Q7Z695 626 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 CROCCP2Q86T23 111 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 TMPRSS11BQ86T26 416 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 ZFAND4Q86XD8 727 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 DTX1Q86Y01 620 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.66□□□□□ -1.34
LIMD1-204ENST00000474665 LSMEM2Q8N112 164 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 RNF175Q8N4F7 328 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 ZNF655Q8N720 491 aaPredicted RBP6.66□□□□□ -1.34
LIMD1-204ENST00000474665 SNX31Q8N9S9 440 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 L3MBTL4Q8NA19 623 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 MFSD9Q8NBP5 474 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 RDH11Q8TC12 318 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 POM121Q96HA1 1249 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 PKNOX2Q96KN3 472 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 CDK15Q96Q40 435 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 SMC6Q96SB8 1091 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 SELENOSQ9BQE4 189 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 B3GNT4Q9C0J1 378 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 EHD1Q9H4M9 534 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 NOL11Q9H8H0 719 aaKnown RBP6.66□□□□□ -1.34
LIMD1-204ENST00000474665 ZNF395Q9H8N7 513 aaPredicted RBP6.66□□□□□ -1.34
LIMD1-204ENST00000474665 IPPKQ9H8X2 491 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 MLXIPLQ9NP71 852 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 SEMA4BQ9NPR2 832 aaPredicted RBP6.66□□□□□ -1.34
LIMD1-204ENST00000474665 SLC22A11Q9NSA0 550 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 WDR70Q9NW82 654 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 GPRC5BQ9NZH0 403 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 OPTCQ9UBM4 332 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 ACSL6Q9UKU0 697 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 RARRES3Q9UL19 164 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 TMCO1Q9UM00 188 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 RUVBL1Q9Y265 456 aaKnown RBP6.66□□□□□ -1.34
LIMD1-204ENST00000474665 DYRK1BQ9Y463 629 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 TMEM184BQ9Y519 407 aaPredicted RBP6.66□□□□□ -1.34
LIMD1-204ENST00000474665 TNPO3Q9Y5L0 923 aaKnown RBP6.66□□□□□ -1.34
LIMD1-204ENST00000474665 ZFHX3Q15911 3703 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 DNHD1Q96M86 4753 aa6.66□□□□□ -1.34
LIMD1-204ENST00000474665 PCSK5Q92824 1860 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 TMEM120BA0PK00 339 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.65□□□□□ -1.34
LIMD1-204ENST00000474665 ZSCAN9O15535 394 aaPredicted RBP6.65□□□□□ -1.34
LIMD1-204ENST00000474665 FOXS1O43638 330 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 OR1F1O43749 312 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 SRPX2O60687 465 aaPredicted RBP6.65□□□□□ -1.34
LIMD1-204ENST00000474665 CNOT3O75175 753 aaKnown RBP6.65□□□□□ -1.34
LIMD1-204ENST00000474665 DNAJB6O75190 326 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 OR2B3O76000 313 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 STK17BO94768 372 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 KIAA0754O94854 1291 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 B3GALT4O96024 378 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 CAPN1P07384 714 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 TAC1P20366 129 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 RBMS1P29558 406 aaKnown RBP6.65□□□□□ -1.34
LIMD1-204ENST00000474665 DCTP40126 519 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 PIK3CGP48736 1102 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 SLC18A1P54219 525 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 FOXA1P55317 472 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 ITGA1P56199 1179 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 RAB15P59190 212 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 RPS15AP62244 130 aaKnown RBP6.65□□□□□ -1.34
LIMD1-204ENST00000474665 IRF8Q02556 426 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 CLCQ05315 142 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 SRSF6Q13247 344 aaKnown RBP6.65□□□□□ -1.34
LIMD1-204ENST00000474665 ZC3H12BQ5HYM0 836 aaKnown RBP6.65□□□□□ -1.34
LIMD1-204ENST00000474665 TCHHL1Q5QJ38 904 aaPredicted RBP6.65□□□□□ -1.34
LIMD1-204ENST00000474665 DCAF12Q5T6F0 453 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 TMEM214Q6NUQ4 689 aaKnown RBP6.65□□□□□ -1.34
LIMD1-204ENST00000474665 TMIGD1Q6UXZ0 262 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 CEACAM20Q6UY09 585 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 ZCCHC23Q6ZST2 131 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 FRMD7Q6ZUT3 714 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 PRSS41Q7RTY9 318 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 SYVN1Q86TM6 617 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 BPHLQ86WA6 291 aaPredicted RBP6.65□□□□□ -1.34
LIMD1-204ENST00000474665 PPP1R3BQ86XI6 285 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 PDSS2Q86YH6 399 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 SLC22A9Q8IVM8 553 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 LAS2Q8IYD9 372 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 CSNK1A1LQ8N752 337 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 CCNYL1Q8N7R7 359 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 KCT2Q8NC54 265 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 GALNT6Q8NCL4 622 aa6.65□□□□□ -1.34
LIMD1-204ENST00000474665 OR7G3Q8NG95 312 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms