RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 NME6O75414 186 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-212ENST00000473961 SLC4A1P02730 911 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 ALPLP05186 524 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 SFTPBP07988 381 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 SNHG28P0DPA3 235 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 DARSP14868 501 aaKnown RBP3.85□□□□□ -1.79
BRCA1-212ENST00000473961 NR1D1P20393 614 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 MARCKSP29966 332 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-212ENST00000473961 SFNP31947 248 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 STIP1P31948 543 aaKnown RBP3.85□□□□□ -1.79
BRCA1-212ENST00000473961 NKX2-1P43699 371 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-212ENST00000473961 ATXN3P54252 364 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-212ENST00000473961 KCNK10P57789 538 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 SSTP61278 116 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 DMTNQ08495 405 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 PDE7AQ13946 482 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 TRIM29Q14134 588 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 HERC3Q15034 1050 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 ZNF542PQ5EBM4 170 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 UGT3A1Q6NUS8 523 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 MFSD7Q6UXD7 560 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 GDPD4Q6W3E5 623 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 IL17RELQ6ZVW7 336 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 FCRLAQ7L513 359 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 ASPGQ86U10 573 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 LAX1Q8IWV1 398 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 FAM89BQ8N5H3 189 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 KLHDC1Q8N7A1 406 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 ZNF383Q8NA42 475 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 GANCQ8TET4 914 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 NUDCD2Q8WVJ2 157 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 TM9SF4Q92544 642 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 PIK3R3Q92569 461 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 ANP32BQ92688 251 aaKnown RBP3.85□□□□□ -1.79
BRCA1-212ENST00000473961 RFT1Q96AA3 541 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 ZNF354BQ96LW1 612 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 C16orf45Q96MC5 204 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-212ENST00000473961 GUCD1Q96NT3 240 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 PSD2Q9BQI7 771 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 SLC39A8Q9C0K1 460 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 TRPV6Q9H1D0 765 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 MARCH7Q9H992 704 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 VIPAS39Q9H9C1 493 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 PELI2Q9HAT8 420 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 RAVER2Q9HCJ3 691 aaKnown RBP3.85□□□□□ -1.79
BRCA1-212ENST00000473961 GPN1Q9HCN4 374 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-212ENST00000473961 RAB9BQ9NP90 201 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 MRPL17Q9NRX2 175 aaKnown RBP3.85□□□□□ -1.79
BRCA1-212ENST00000473961 PHPT1Q9NRX4 125 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-212ENST00000473961 DONSONQ9NYP3 566 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 TAAR2Q9P1P5 351 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 RIPK3Q9Y572 518 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 TEX264Q9Y6I9 313 aa3.85□□□□□ -1.79
BRCA1-212ENST00000473961 WDR97A6NE52 1622 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 KIAA1217Q5T5P2 1943 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 CFAP73A6NFT4 308 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 NDC80O14777 642 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 CPLX1O14810 134 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 IKBKBO14920 756 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 FRAT2O75474 233 aaPredicted RBP3.84□□□□□ -1.79
BRCA1-212ENST00000473961 TRIM16O95361 564 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 MT-ATP6P00846 226 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 ATP1B1P05026 303 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 SERPINF2P08697 491 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 UGT1A6P19224 532 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 ITGA3P26006 1051 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 RBMS1P29558 406 aaKnown RBP3.84□□□□□ -1.79
BRCA1-212ENST00000473961 SLC1A3P43003 542 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 NSFP46459 744 aaKnown RBP3.84□□□□□ -1.79
BRCA1-212ENST00000473961 NUMBP49757 651 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 PDLIM4P50479 330 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 GAS1P54826 345 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 FKBP1BP68106 108 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 CDR2Q01850 454 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 TECRLQ5HYJ1 363 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 PSRC1Q6PGN9 363 aaPredicted RBP3.84□□□□□ -1.79
BRCA1-212ENST00000473961 SIGLEC15Q6ZMC9 328 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 C15orf52Q6ZUT6 534 aaKnown RBP3.84□□□□□ -1.79
BRCA1-212ENST00000473961 SLC24A5Q71RS6 500 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 SLC16A9Q7RTY1 509 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 ARMC9Q7Z3E5 817 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 TAF8Q7Z7C8 310 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 CCDC185Q8N715 623 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 SMYD1Q8NB12 490 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 SLC37A3Q8NCC5 494 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 CCNYQ8ND76 341 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 SLC24A4Q8NFF2 622 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 SUSD6Q92537 303 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 SEPT8Q92599 483 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 TMEM186Q96B77 213 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 TRIM44Q96DX7 344 aaPredicted RBP3.84□□□□□ -1.79
BRCA1-212ENST00000473961 RBM41Q96IZ5 413 aaKnown RBP3.84□□□□□ -1.79
BRCA1-212ENST00000473961 UBAC1Q9BSL1 405 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 ATG10Q9H0Y0 220 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 ABCG4Q9H172 646 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 HSD3B7Q9H2F3 369 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 HIPK2Q9H2X6 1198 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 CHMP4BQ9H444 224 aaKnown RBP3.84□□□□□ -1.79
BRCA1-212ENST00000473961 ZDHHC6Q9H6R6 413 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 HOMER3Q9NSC5 361 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms