RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 SIAH1Q8IUQ4 282 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 C11orf65Q8NCR3 313 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 METTL6Q8TCB7 284 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 ZNF431Q8TF32 576 aaPredicted RBP4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 CLEC4DQ8WXI8 215 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 TMEM41AQ96HV5 264 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 CSPG4P5Q96PW8 444 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 TRNT1Q96Q11 434 aaKnown RBP4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 PCDHB18PQ96TA0 734 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 P2RY13Q9BPV8 354 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 EIF2AK1Q9BQI3 630 aaKnown RBP4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 UGT2B28Q9BY64 529 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 GSDMCQ9BYG8 508 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 CCDC90BQ9GZT6 254 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 C3orf14Q9HBI5 128 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 NIT2Q9NQR4 276 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 FAM49BQ9NUQ9 324 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 EXD2Q9NVH0 621 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 SPHK1Q9NYA1 384 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 MORF4L1Q9UBU8 362 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 MIOXQ9UGB7 285 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 BTNL2Q9UIR0 455 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 MID2Q9UJV3 735 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 NOCTQ9UK39 431 aaKnown RBP4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 EMCNQ9ULC0 261 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 CDYLQ9Y232 598 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 RNF215Q9Y6U7 377 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 FAM149AA5PLN7 773 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 KPNA7A9QM74 516 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 SULT1C2O00338 296 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 RTCAO00442 366 aaKnown RBP4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 KPNA3O00505 521 aaPredicted RBP4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 ADAMTS3O15072 1205 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 PSPNO60542 156 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 EIF3GO75821 320 aaKnown RBP eCLIP4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 OAZ2O95190 189 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 HPXP02790 462 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 ANXA6P08133 673 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 CKBP12277 381 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 GNSP15586 552 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 OGNP20774 298 aaKnown RBP4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 CAPN3P20807 821 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 ITGB8P26012 769 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 RYKP34925 604 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 GPX4P36969 197 aaPredicted RBP4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 CD79BP40259 229 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 CASP2P42575 452 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 PSPHP78330 225 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 MYL7Q01449 175 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 HSF2Q03933 536 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 CSTF1Q05048 431 aaKnown RBP4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 FPGSQ05932 587 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 RNF212Q495C1 297 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 TIGD5Q53EQ6 642 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 KLHL26Q53HC5 615 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 LBHQ53QV2 105 aaPredicted RBP4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 CDKL4Q5MAI5 379 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 PDZK1Q5T2W1 519 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 ANKRD22Q5VYY1 191 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 KANK2Q63ZY3 851 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 ARHGAP17Q68EM7 881 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 EFCAB12Q6NXP0 572 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 ANKRD54Q6NXT1 300 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 ERICH5Q6P6B1 374 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 SLC23A3Q6PIS1 610 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 KDELC1Q6UW63 502 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 SSX9Q7RTT3 188 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 LHFPL3Q86UP9 236 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 VSIG10LQ86VR7 867 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 C10orf107Q8IVU9 208 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 PCDH20Q8N6Y1 951 aaKnown RBP4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 MAPK15Q8TD08 544 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 EXOSC8Q96B26 276 aaKnown RBP4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 C19orf60Q96EN9 201 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 FGFBP2Q9BYJ0 223 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 ARNT2Q9HBZ2 717 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 MYEF2Q9P2K5 600 aaKnown RBP4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 ERVK-18Q9QC07 812 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 RUVBL2Q9Y230 463 aaKnown RBP4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 RAP2CQ9Y3L5 183 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 TRPV2Q9Y5S1 764 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 CNTNAP2Q9UHC6 1331 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 PLIN4Q96Q06 1357 aa4.96□□□□□ -1.62
TMEM39A-206ENST00000473684 A0A0B4J293 547 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 OR6C74A6NCV1 312 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 TMEM191CA6NGB0 347 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 A8MVJ9 347 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 CA12O43570 354 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 AIREO43918 545 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 ERN1O75460 977 aaKnown RBP4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 PLATP00750 562 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 POMCP01189 267 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 IFNB1P01574 187 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 ZDHHC11BP0C7U3 371 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 COX5BP10606 129 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 HSD17B1P14061 328 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 ETS1P14921 441 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 PDGFRAP16234 1089 aa4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 WARSP23381 471 aaKnown RBP4.95□□□□□ -1.62
TMEM39A-206ENST00000473684 ARRB2P32121 409 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms