RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 CNR2P34972 360 aa14.23□□□□□ -0.13
LMNA-213ENST00000473598 TXNL4AP83876 142 aaKnown RBP14.23□□□□□ -0.13
LMNA-213ENST00000473598 PCDH1Q08174 1060 aa14.23□□□□□ -0.13
LMNA-213ENST00000473598 SUZ12Q15022 739 aaKnown RBP14.23□□□□□ -0.13
LMNA-213ENST00000473598 TRIM16LQ309B1 348 aa14.23□□□□□ -0.13
LMNA-213ENST00000473598 DDIASQ8IXT1 998 aa14.23□□□□□ -0.13
LMNA-213ENST00000473598 LMNTD1Q8N9Z9 388 aa14.23□□□□□ -0.13
LMNA-213ENST00000473598 L3MBTL4Q8NA19 623 aa14.23□□□□□ -0.13
LMNA-213ENST00000473598 TMIGD2Q96BF3 282 aa14.23□□□□□ -0.13
LMNA-213ENST00000473598 C3orf30Q96M34 536 aa14.23□□□□□ -0.13
LMNA-213ENST00000473598 SLC39A3Q9BRY0 314 aa14.23□□□□□ -0.13
LMNA-213ENST00000473598 CCDC177Q9NQR7 707 aaPredicted RBP14.23□□□□□ -0.13
LMNA-213ENST00000473598 MRGBPQ9NV56 204 aa14.23□□□□□ -0.13
LMNA-213ENST00000473598 GPRC5BQ9NZH0 403 aa14.23□□□□□ -0.13
LMNA-213ENST00000473598 APOBEC3BQ9UH17 382 aaKnown RBP14.23□□□□□ -0.13
LMNA-213ENST00000473598 POMPQ9Y244 141 aa14.23□□□□□ -0.13
LMNA-213ENST00000473598 BTRCQ9Y297 605 aa14.23□□□□□ -0.13
LMNA-213ENST00000473598 PTGDR2Q9Y5Y4 395 aa14.23□□□□□ -0.13
LMNA-213ENST00000473598 COLEC10Q9Y6Z7 277 aa14.23□□□□□ -0.13
LMNA-213ENST00000473598 AIM2O14862 343 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 UGDHO60701 494 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 PRAMEF4O60810 478 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 CSF2P04141 144 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 NPPBP16860 134 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 NBL1P41271 181 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 CHIT1Q13231 466 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 TCHHL1Q5QJ38 904 aaPredicted RBP14.22□□□□□ -0.13
LMNA-213ENST00000473598 PRAMEF9Q5VWM5 478 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 PMS2CLQ68D20 193 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 ZFP1Q6P2D0 407 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 SUSD1Q6UWL2 747 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 CHERPQ8IWX8 916 aaKnown RBP14.22□□□□□ -0.13
LMNA-213ENST00000473598 FBXW8Q8N3Y1 598 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 RAB42Q8N4Z0 105 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 ESX1Q8N693 406 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 KYQ8NBH2 561 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 SETD7Q8WTS6 366 aaKnown RBP14.22□□□□□ -0.13
LMNA-213ENST00000473598 C12orf43Q96C57 262 aaKnown RBP14.22□□□□□ -0.13
LMNA-213ENST00000473598 MAGEB10Q96LZ2 347 aaPredicted RBP14.22□□□□□ -0.13
LMNA-213ENST00000473598 DOK1Q99704 481 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 TAAR2Q9P1P5 351 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 ZNF624Q9P2J8 865 aaPredicted RBP14.22□□□□□ -0.13
LMNA-213ENST00000473598 KCNE2Q9Y6J6 123 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 ATP6AP2A0A1C7CYW4 349 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 E7EQ34 232 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 H3BNH8 94 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 BCAT2O15382 392 aaPredicted RBP14.22□□□□□ -0.13
LMNA-213ENST00000473598 IDH3BO43837 385 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 ATP6AP2O75787 350 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 LINC00032P0C843 101 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 NME1P15531 152 aaKnown RBP14.22□□□□□ -0.13
LMNA-213ENST00000473598 NDUFS1P28331 727 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 TTKP33981 857 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 RCVRNP35243 200 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 NUDT2P50583 147 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 NXPH1P58417 271 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 TSTA3Q13630 321 aaPredicted RBP14.22□□□□□ -0.13
LMNA-213ENST00000473598 SF3B4Q15427 424 aaKnown RBP eCLIP14.22□□□□□ -0.134e-7■■■■□ 23.7
LMNA-213ENST00000473598 LIPJQ5W064 366 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 LARP4Q71RC2 724 aaKnown RBP eCLIP14.22□□□□□ -0.138e-10■■□□□ 11.8
LMNA-213ENST00000473598 DSELQ8IZU8 1212 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 GALNT4Q8N4A0 578 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 TMCO5AQ8N6Q1 288 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 SUMF1Q8NBK3 374 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 OR52E1Q8NGJ3 308 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 NRTNQ99748 197 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 LRRC61Q9BV99 259 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 RAB11FIP5Q9BXF6 653 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 MROQ9BYG7 248 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 SLC29A3Q9BZD2 475 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 KIR3DX1Q9H7L2 352 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 MYRFQ9Y2G1 1151 aa14.22□□□□□ -0.13
LMNA-213ENST00000473598 TMA7Q9Y2S6 64 aaKnown RBP14.22□□□□□ -0.13
LMNA-213ENST00000473598 KCNE1BA0A087WTH5 132 aa14.21□□□□□ -0.13
LMNA-213ENST00000473598 PRAMEF33A0A0G2JMD5 474 aa14.21□□□□□ -0.13
LMNA-213ENST00000473598 TRIM64BA6NI03 449 aa14.21□□□□□ -0.13
LMNA-213ENST00000473598 SORBS2O94875 1100 aaKnown RBP14.21□□□□□ -0.13
LMNA-213ENST00000473598 CELA2BP08218 269 aaPredicted RBP14.21□□□□□ -0.13
LMNA-213ENST00000473598 MSL3P1P0C860 447 aa14.21□□□□□ -0.13
LMNA-213ENST00000473598 CSNK1EP49674 416 aaKnown RBP14.21□□□□□ -0.13
LMNA-213ENST00000473598 HTR6P50406 440 aa14.21□□□□□ -0.13
LMNA-213ENST00000473598 RAB28P51157 221 aa14.21□□□□□ -0.13
LMNA-213ENST00000473598 AFF3P51826 1226 aaKnown RBP14.21□□□□□ -0.13
LMNA-213ENST00000473598 IRF8Q02556 426 aa14.21□□□□□ -0.13
LMNA-213ENST00000473598 OXA1LQ15070 435 aa14.21□□□□□ -0.13
LMNA-213ENST00000473598 PRRT3Q5FWE3 981 aa14.21□□□□□ -0.13
LMNA-213ENST00000473598 XKR7Q5GH72 579 aa14.21□□□□□ -0.13
LMNA-213ENST00000473598 XKR6Q5GH73 641 aa14.21□□□□□ -0.13
LMNA-213ENST00000473598 PRAMEF14Q5SWL7 426 aa14.21□□□□□ -0.13
LMNA-213ENST00000473598 AGAP7PQ5VUJ5 663 aa14.21□□□□□ -0.13
LMNA-213ENST00000473598 PRAMEF13Q5VWM6 474 aa14.21□□□□□ -0.13
LMNA-213ENST00000473598 IL27RAQ6UWB1 636 aa14.21□□□□□ -0.13
LMNA-213ENST00000473598 LCTLQ6UWM7 567 aa14.21□□□□□ -0.13
LMNA-213ENST00000473598 C16orf89Q6UX73 402 aa14.21□□□□□ -0.13
LMNA-213ENST00000473598 RNF165Q6ZSG1 346 aa14.21□□□□□ -0.13
LMNA-213ENST00000473598 TAF8Q7Z7C8 310 aa14.21□□□□□ -0.13
LMNA-213ENST00000473598 HPS6Q86YV9 775 aa14.21□□□□□ -0.13
LMNA-213ENST00000473598 C2orf73Q8N5S3 287 aaPredicted RBP14.21□□□□□ -0.13
LMNA-213ENST00000473598 NEIL2Q969S2 332 aa14.21□□□□□ -0.13
LMNA-213ENST00000473598 PRPF19Q9UMS4 504 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms