RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 DLL4Q9NR61 685 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 PLSCR2Q9NRY7 297 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 ZNF358Q9NW07 568 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 SCN3AQ9NY46 2000 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 TEKT2Q9UIF3 430 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 AMFRQ9UKV5 643 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 NAALAD2Q9Y3Q0 740 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 CLDN16Q9Y5I7 305 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 TMEM200CA6NKL6 621 aa9□□□□□ -0.97
MCF2L-223ENST00000473345 TGFBR3LH3BV60 316 aa9□□□□□ -0.97
MCF2L-223ENST00000473345 PHF2O75151 1096 aa9□□□□□ -0.97
MCF2L-223ENST00000473345 PDE9AO76083 593 aa9□□□□□ -0.97
MCF2L-223ENST00000473345 PKMP14618 531 aaKnown RBP9□□□□□ -0.97
MCF2L-223ENST00000473345 TFEBP19484 476 aa9□□□□□ -0.97
MCF2L-223ENST00000473345 AVPR1BP47901 424 aa9□□□□□ -0.97
MCF2L-223ENST00000473345 MEOX1P50221 254 aa9□□□□□ -0.97
MCF2L-223ENST00000473345 TERF1P54274 439 aa9□□□□□ -0.97
MCF2L-223ENST00000473345 NAP1L1P55209 391 aaKnown RBP9□□□□□ -0.97
MCF2L-223ENST00000473345 NUP107P57740 925 aa9□□□□□ -0.97
MCF2L-223ENST00000473345 TBPL1P62380 186 aa9□□□□□ -0.97
MCF2L-223ENST00000473345 PTK6Q13882 451 aa9□□□□□ -0.97
MCF2L-223ENST00000473345 SPA17Q15506 151 aa9□□□□□ -0.97
MCF2L-223ENST00000473345 NSDHLQ15738 373 aa9□□□□□ -0.97
MCF2L-223ENST00000473345 PEX26Q7Z412 305 aa9□□□□□ -0.97
MCF2L-223ENST00000473345 PCGF5Q86SE9 256 aa9□□□□□ -0.97
MCF2L-223ENST00000473345 RPS19BP1Q86WX3 136 aaKnown RBP9□□□□□ -0.97
MCF2L-223ENST00000473345 LRRC6Q86X45 466 aa9□□□□□ -0.97
MCF2L-223ENST00000473345 AFAP1L2Q8N4X5 818 aa9□□□□□ -0.97
MCF2L-223ENST00000473345 TMEM178AQ8NBL3 297 aa9□□□□□ -0.97
MCF2L-223ENST00000473345 FBXO15Q8NCQ5 510 aaPredicted RBP9□□□□□ -0.97
MCF2L-223ENST00000473345 ZNF740Q8NDX6 193 aa9□□□□□ -0.97
MCF2L-223ENST00000473345 LILRB4Q8NHJ6 448 aa9□□□□□ -0.97
MCF2L-223ENST00000473345 METTL21AQ8WXB1 218 aa9□□□□□ -0.97
MCF2L-223ENST00000473345 RERGQ96A58 199 aaPredicted RBP9□□□□□ -0.97
MCF2L-223ENST00000473345 SEC16BQ96JE7 1060 aa9□□□□□ -0.97
MCF2L-223ENST00000473345 OLFM1Q99784 485 aa9□□□□□ -0.97
MCF2L-223ENST00000473345 NECTIN3Q9NQS3 549 aa9□□□□□ -0.97
MCF2L-223ENST00000473345 CCM2LQ9NUG4 571 aaPredicted RBP9□□□□□ -0.97
MCF2L-223ENST00000473345 ANAPC5Q9UJX4 755 aa9□□□□□ -0.97
MCF2L-223ENST00000473345 RPH3AQ9Y2J0 694 aaPredicted RBP9□□□□□ -0.97
MCF2L-223ENST00000473345 LIPGQ9Y5X9 500 aa9□□□□□ -0.97
MCF2L-223ENST00000473345 DNHD1Q96M86 4753 aa9□□□□□ -0.97
MCF2L-223ENST00000473345 SPG11Q96JI7 2443 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 KCNE1BA0A087WTH5 132 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 IGKV3D-11A0A0A0MRZ8 115 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 A8MUA0 341 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 MAGEB17A8MXT2 336 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 E7EVH7 732 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 NDC80O14777 642 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 KPNA5O15131 536 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 CHST10O43529 356 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 TSPAN12O95859 305 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 SYF2O95926 243 aaKnown RBP8.99□□□□□ -0.97
MCF2L-223ENST00000473345 TUBB4AP04350 444 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 TPOP07202 933 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 CDH1P12830 882 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 CD99P14209 185 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 CD1EP15812 388 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 CHRM3P20309 590 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 MAOAP21397 527 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 PPP2R1BP30154 601 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 STIP1P31948 543 aaKnown RBP8.99□□□□□ -0.97
MCF2L-223ENST00000473345 TRHRP34981 398 aaPredicted RBP8.99□□□□□ -0.97
MCF2L-223ENST00000473345 PTGS2P35354 604 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 KCNJ1P48048 391 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 ADARP55265 1226 aaKnown RBP8.99□□□□□ -0.97
MCF2L-223ENST00000473345 OR4D2P58180 307 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 ABATP80404 500 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 HYAL2Q12891 473 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 FOXD4Q12950 439 aaPredicted RBP8.99□□□□□ -0.97
MCF2L-223ENST00000473345 CTBP1Q13363 440 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 RPS6KA1Q15418 735 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 EXT1Q16394 746 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 ANKRD22Q5VYY1 191 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 RTL6Q6ICC9 239 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 SLC13A5Q86YT5 568 aaPredicted RBP8.99□□□□□ -0.97
MCF2L-223ENST00000473345 TGIF2LYQ8IUE0 185 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 CILP2Q8IUL8 1156 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 CPNE9Q8IYJ1 553 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 ARMC10Q8N2F6 343 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 RAB42Q8N4Z0 105 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 APCDD1LQ8NCL9 501 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 C16orf52Q8NHV5 167 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 GSDMBQ8TAX9 411 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 CD200R1Q8TD46 325 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 SREK1Q8WXA9 508 aaKnown RBP8.99□□□□□ -0.97
MCF2L-223ENST00000473345 FOPNLQ96NB1 174 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 OR4K3Q96R72 315 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 SMR3AQ99954 134 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 LIN28AQ9H9Z2 209 aaKnown RBP8.99□□□□□ -0.97
MCF2L-223ENST00000473345 RRAGDQ9NQL2 400 aaPredicted RBP8.99□□□□□ -0.97
MCF2L-223ENST00000473345 FBXO6Q9NRD1 293 aaPredicted RBP8.99□□□□□ -0.97
MCF2L-223ENST00000473345 TMEM184CQ9NVA4 438 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 TRMT1Q9NXH9 659 aaKnown RBP8.99□□□□□ -0.97
MCF2L-223ENST00000473345 IKZF3Q9UKT9 509 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 GTF3C1Q12789 2109 aa8.99□□□□□ -0.97
MCF2L-223ENST00000473345 F8W8V4 182 aa8.98□□□□□ -0.97
MCF2L-223ENST00000473345 PRRG2O14669 202 aa8.98□□□□□ -0.97
MCF2L-223ENST00000473345 SLC16A5O15375 505 aa8.98□□□□□ -0.97
MCF2L-223ENST00000473345 CDC40O60508 579 aaKnown RBP eCLIP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms