RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 DYRK1BQ9Y463 629 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 KCNE2Q9Y6J6 123 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 MAU2Q9Y6X3 613 aa12.47□□□□□ -0.41
TPM3-216ENST00000473036 A0A1B0GTL3 188 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 C21orf140B9A014 251 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 K7EPI3 171 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 CCNT2O60583 730 aaKnown RBP12.46□□□□□ -0.41
TPM3-216ENST00000473036 CREG1O75629 220 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 WFS1O76024 890 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 IPO13O94829 963 aaKnown RBP12.46□□□□□ -0.41
TPM3-216ENST00000473036 KLK3P07288 261 aaPredicted RBP12.46□□□□□ -0.41
TPM3-216ENST00000473036 UMODP07911 640 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 RAB40ALP0C0E4 278 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 C1GALT1C1LP0DN25 315 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 GNAZP19086 355 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 ARSFP54793 590 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 EMP3P54852 163 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 DOC2AQ14183 400 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 ERV3-1Q14264 604 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 SLBPQ14493 270 aaKnown RBP eCLIP12.46□□□□□ -0.41
TPM3-216ENST00000473036 PCBP2Q15366 365 aaKnown RBP eCLIP12.46□□□□□ -0.41
TPM3-216ENST00000473036 PDK4Q16654 411 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 SYT16Q17RD7 645 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 YOD1Q5VVQ6 348 aaPredicted RBP12.46□□□□□ -0.41
TPM3-216ENST00000473036 MLIPQ5VWP3 458 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 LRRC70Q7Z2Q7 622 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 ASPGQ86U10 573 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.46□□□□□ -0.41
TPM3-216ENST00000473036 PTGR2Q8N8N7 351 aaPredicted RBP12.46□□□□□ -0.41
TPM3-216ENST00000473036 AMER3Q8N944 861 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 TTC29Q8NA56 475 aaPredicted RBP12.46□□□□□ -0.41
TPM3-216ENST00000473036 ADAMTS17Q8TE56 1095 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 PHF21BQ96EK2 531 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 NSUN5Q96P11 429 aaKnown RBP12.46□□□□□ -0.41
TPM3-216ENST00000473036 SMC6Q96SB8 1091 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 DPH2Q9BQC3 489 aaPredicted RBP12.46□□□□□ -0.41
TPM3-216ENST00000473036 GPR87Q9BY21 358 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 TRIM4Q9C037 500 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 SLC7A5P2Q9GIP4 190 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 CENPHQ9H3R5 247 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 ZBTB26Q9HCK0 441 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 SSU72Q9NP77 194 aaKnown RBP12.46□□□□□ -0.41
TPM3-216ENST00000473036 TXLNGQ9NUQ3 528 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 GPRC5BQ9NZH0 403 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 CTSFQ9UBX1 484 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 NDOR1Q9UHB4 597 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 DCDC2Q9UHG0 476 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 TCFL5Q9UL49 500 aa12.46□□□□□ -0.41
TPM3-216ENST00000473036 A0A0A6YYC8 382 aaPredicted RBP12.45□□□□□ -0.42
TPM3-216ENST00000473036 SYCE1LA8MT33 242 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 A8MT66 165 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 I3L1I5 382 aaPredicted RBP12.45□□□□□ -0.42
TPM3-216ENST00000473036 E2F3O00716 465 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 PPP6CO00743 305 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 GSTA1P08263 222 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 RBP1P09455 135 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 FAM87AP0C7U9 286 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 SMIM10L1P0DMW3 83 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 GP1BBP13224 206 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 GFAPP14136 432 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 ALDH18A1P54886 795 aaKnown RBP12.45□□□□□ -0.42
TPM3-216ENST00000473036 PCDH1Q08174 1060 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 CDC20Q12834 499 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 UBAP2LQ14157 1087 aaKnown RBP12.45□□□□□ -0.42
TPM3-216ENST00000473036 TBR1Q16650 682 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 TSNAXIP1Q2TAA8 658 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 FAM214AQ32MH5 1076 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 KLC3Q6P597 504 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 OVCH1Q7RTY7 1134 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 AFAP1L2Q8N4X5 818 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 AMER2Q8N7J2 671 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 SNX31Q8N9S9 440 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 OR9A4Q8NGU2 314 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 ZCCHC10Q8TBK6 192 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 SLC13A3Q8WWT9 602 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 RERGQ96A58 199 aaPredicted RBP12.45□□□□□ -0.42
TPM3-216ENST00000473036 KIAA1143Q96AT1 154 aaPredicted RBP12.45□□□□□ -0.42
TPM3-216ENST00000473036 THAP11Q96EK4 314 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 SMIM10Q96HG1 83 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 SCYL1Q96KG9 808 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 SPSB2Q99619 263 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 SH3GL2Q99962 352 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 MRPL57Q9BQC6 102 aaKnown RBP12.45□□□□□ -0.42
TPM3-216ENST00000473036 CNOT10Q9H9A5 744 aaKnown RBP12.45□□□□□ -0.42
TPM3-216ENST00000473036 TMBIM4Q9HC24 238 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 ZNF446Q9NWS9 450 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 ZFP69BQ9UJL9 534 aa12.45□□□□□ -0.42
TPM3-216ENST00000473036 VSTM2BA6NLU5 285 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 ZNF891A8MT65 544 aaPredicted RBP12.44□□□□□ -0.42
TPM3-216ENST00000473036 OR7A17O14581 309 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 NDUFS4O43181 175 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 DLX3O60479 287 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 S100BP04271 92 aaPredicted RBP12.44□□□□□ -0.42
TPM3-216ENST00000473036 CREB1P16220 341 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 AGXTP21549 392 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 EEF1DP29692 281 aaKnown RBP12.44□□□□□ -0.42
TPM3-216ENST00000473036 AHRP35869 848 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 CASP2P42575 452 aa12.44□□□□□ -0.42
TPM3-216ENST00000473036 MAT1AQ00266 395 aaKnown RBP12.44□□□□□ -0.42
TPM3-216ENST00000473036 TLE1Q04724 770 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms