RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 TADA1Q96BN2 335 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 RBM41Q96IZ5 413 aaKnown RBP3.37□□□□□ -1.87
XRN1-209ENST00000472625 TEKT5Q96M29 485 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 AGAP4Q96P64 663 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 GBP5Q96PP8 586 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 RNF157Q96PX1 679 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 ALS2CR12Q96Q35 445 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 TRIB3Q96RU7 358 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 COPS8Q99627 209 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 MAP3K3Q99759 626 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 WDR77Q9BQA1 342 aaPredicted RBP3.37□□□□□ -1.87
XRN1-209ENST00000472625 NDC1Q9BTX1 674 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 RAB11FIP5Q9BXF6 653 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 TLR10Q9BXR5 811 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 TRIM7Q9C029 511 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 CHST8Q9H2A9 424 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 TFB2MQ9H5Q4 396 aaKnown RBP3.37□□□□□ -1.87
XRN1-209ENST00000472625 WDR54Q9H977 334 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 GLOD4Q9HC38 313 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 IL26Q9NPH9 171 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 IRAK4Q9NWZ3 460 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 IL1RAPL1Q9NZN1 696 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 VSX1Q9NZR4 365 aaPredicted RBP3.37□□□□□ -1.87
XRN1-209ENST00000472625 FAM30AQ9NZY2 134 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 IFT80Q9P2H3 777 aaPredicted RBP3.37□□□□□ -1.87
XRN1-209ENST00000472625 KLF2Q9Y5W3 355 aaPredicted RBP3.37□□□□□ -1.87
XRN1-209ENST00000472625 COPG1Q9Y678 874 aaKnown RBP3.37□□□□□ -1.87
XRN1-209ENST00000472625 UNC13CQ8NB66 2214 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 NBASA2RRP1 2371 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 AKAP9Q99996 3911 aa3.37□□□□□ -1.87
XRN1-209ENST00000472625 ANKRD36A6QL64 1941 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 PRRC2CQ9Y520 2896 aaKnown RBP3.36□□□□□ -1.87
XRN1-209ENST00000472625 DOCK9Q9BZ29 2069 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 CSMD2Q7Z408 3487 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 A0A0J9YY10 115 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 LOC285095A0A1B0GVY8 99 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 A0A1B0GX78 115 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 A1L4Q6 167 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 DYTNA2CJ06 578 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 GRID2IPA4D2P6 1211 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 OR6C74A6NCV1 312 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 C3orf70A6NLC5 250 aaPredicted RBP3.36□□□□□ -1.87
XRN1-209ENST00000472625 OR2AG2A6NM03 316 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 AGPSO00116 658 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 ZNF749O43361 778 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 AKR1B10O60218 316 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 MFAP3LO75121 409 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 MTX2O75431 263 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 SRP72O76094 671 aaKnown RBP3.36□□□□□ -1.87
XRN1-209ENST00000472625 USP1O94782 785 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 IPO7O95373 1038 aaKnown RBP3.36□□□□□ -1.87
XRN1-209ENST00000472625 CBX6O95503 412 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 GAS8O95995 478 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 MT-CYBP00156 380 aaPredicted RBP3.36□□□□□ -1.87
XRN1-209ENST00000472625 CRYABP02511 175 aaKnown RBP3.36□□□□□ -1.87
XRN1-209ENST00000472625 FTH1P02794 183 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 UQCRHP07919 91 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 MMP2P08253 660 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 CD48P09326 243 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 TCF4P15884 667 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 PTMSP20962 102 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 MMP11P24347 488 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 PTPN3P26045 913 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 CTNNA2P26232 953 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 PBLDP30039 288 aaPredicted RBP3.36□□□□□ -1.87
XRN1-209ENST00000472625 PRDX3P30048 256 aaKnown RBP3.36□□□□□ -1.87
XRN1-209ENST00000472625 OTX2P32243 289 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 PPARGP37231 505 aaPredicted RBP3.36□□□□□ -1.87
XRN1-209ENST00000472625 NSG1P42857 185 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 ARSEP51690 589 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 KPNA2P52292 529 aaKnown RBP3.36□□□□□ -1.87
XRN1-209ENST00000472625 GEMP55040 296 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 RPS18P62269 152 aaKnown RBP3.36□□□□□ -1.87
XRN1-209ENST00000472625 NIPAL4Q0D2K0 466 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 CHAF1BQ13112 559 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 SP140Q13342 867 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 ART3Q13508 389 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 ATP1A4Q13733 1029 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 NFE2L1Q14494 772 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 KCNAB1Q14722 419 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 ZNF169Q14929 603 aaPredicted RBP3.36□□□□□ -1.87
XRN1-209ENST00000472625 KIR2DS3Q14952 304 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 TAF1AQ15573 450 aaPredicted RBP3.36□□□□□ -1.87
XRN1-209ENST00000472625 SLC1A5Q15758 541 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 LONRF1Q17RB8 773 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 SLC5A12Q1EHB4 618 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 KIF26BQ2KJY2 2108 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 EIF2S3LQ2VIR3 472 aaKnown RBP3.36□□□□□ -1.87
XRN1-209ENST00000472625 P3H1Q32P28 736 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 ANO6Q4KMQ2 910 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 TFDP3Q5H9I0 405 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 AARS2Q5JTZ9 985 aaKnown RBP3.36□□□□□ -1.87
XRN1-209ENST00000472625 SIRPB2Q5JXA9 342 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 PLEKHS1Q5SXH7 462 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 CCDC181Q5TID7 509 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 RPUSD3Q6P087 351 aaKnown RBP3.36□□□□□ -1.87
XRN1-209ENST00000472625 TTC23LQ6PF05 361 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 SPESP1Q6UW49 350 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 Q6ZS92 163 aa3.36□□□□□ -1.87
XRN1-209ENST00000472625 RFLNAQ6ZTI6 216 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms