RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 ZNF473Q8WTR7 871 aaKnown RBP16.09■□□□□ 0.17
CCM2-205ENST00000472223 ZNF501Q96CX3 271 aaPredicted RBP16.09■□□□□ 0.17
CCM2-205ENST00000472223 SORT1Q99523 831 aa16.09■□□□□ 0.17
CCM2-205ENST00000472223 ZNF395Q9H8N7 513 aaPredicted RBP16.09■□□□□ 0.17
CCM2-205ENST00000472223 TXLNGQ9NUQ3 528 aa16.09■□□□□ 0.17
CCM2-205ENST00000472223 RIC8BQ9NVN3 520 aa16.09■□□□□ 0.17
CCM2-205ENST00000472223 SRPK3Q9UPE1 567 aa16.09■□□□□ 0.17
CCM2-205ENST00000472223 CNOT1A5YKK6 2376 aaKnown RBP16.08■□□□□ 0.17
CCM2-205ENST00000472223 A0A1B0GTL3 188 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 HYKKA2RU49 373 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 FAM149AA5PLN7 773 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 MAGEB17A8MXT2 336 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 TGFB1P01137 390 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 TROVE2P10155 538 aaKnown RBP eCLIP16.08■□□□□ 0.16
CCM2-205ENST00000472223 FGF5P12034 268 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 EMP3P54852 163 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 FOXA1P55317 472 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 RPS13P62277 151 aaKnown RBP16.08■□□□□ 0.16
CCM2-205ENST00000472223 FOXC1Q12948 553 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 MUM1Q2TAK8 710 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.08■□□□□ 0.16
CCM2-205ENST00000472223 TOR1AIP1Q5JTV8 583 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 SPDYAQ5MJ70 313 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 TRIM40Q6P9F5 258 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 DGLUCYQ7Z3D6 616 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 OR1L3Q8NH93 324 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 TWIST2Q8WVJ9 160 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 USP7Q93009 1102 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 CLIP3Q96DZ5 547 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 TM4SF19Q96DZ7 209 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 ROGDIQ9GZN7 287 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 C20orf27Q9GZN8 174 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 REXO4Q9GZR2 422 aaKnown RBP16.08■□□□□ 0.16
CCM2-205ENST00000472223 SPRTNQ9H040 489 aaPredicted RBP16.08■□□□□ 0.16
CCM2-205ENST00000472223 NSRP1Q9H0G5 558 aaKnown RBP16.08■□□□□ 0.16
CCM2-205ENST00000472223 DMRT3Q9NQL9 472 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 PNPOQ9NVS9 261 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 SIDT1Q9NXL6 827 aaKnown RBP16.08■□□□□ 0.16
CCM2-205ENST00000472223 HAO1Q9UJM8 370 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 PPT2Q9UMR5 302 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 CDC14AQ9UNH5 594 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 SLC12A4Q9UP95 1085 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 SATB2Q9UPW6 733 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 DMXL1Q9Y485 3027 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 PIEZO1Q92508 2521 aa16.08■□□□□ 0.16
CCM2-205ENST00000472223 HDAC3O15379 428 aa16.07■□□□□ 0.16
CCM2-205ENST00000472223 SKAP2O75563 359 aaPredicted RBP16.07■□□□□ 0.16
CCM2-205ENST00000472223 SCRG1O75711 98 aa16.07■□□□□ 0.16
CCM2-205ENST00000472223 CCL4P13236 92 aa16.07■□□□□ 0.16
CCM2-205ENST00000472223 ALAS2P22557 587 aa16.07■□□□□ 0.16
CCM2-205ENST00000472223 ARRB2P32121 409 aa16.07■□□□□ 0.16
CCM2-205ENST00000472223 GABRA4P48169 554 aa16.07■□□□□ 0.16
CCM2-205ENST00000472223 GYS2P54840 703 aa16.07■□□□□ 0.16
CCM2-205ENST00000472223 GNGT1P63211 74 aa16.07■□□□□ 0.16
CCM2-205ENST00000472223 CUL3Q13618 768 aa16.07■□□□□ 0.16
CCM2-205ENST00000472223 ABRAXAS2Q15018 415 aa16.07■□□□□ 0.16
CCM2-205ENST00000472223 HERC3Q15034 1050 aa16.07■□□□□ 0.16
CCM2-205ENST00000472223 PDCD2Q16342 344 aaPredicted RBP16.07■□□□□ 0.16
CCM2-205ENST00000472223 KHDRBS2Q5VWX1 349 aaKnown RBP16.07■□□□□ 0.16
CCM2-205ENST00000472223 CES4AQ5XG92 561 aa16.07■□□□□ 0.16
CCM2-205ENST00000472223 CREB3L4Q8TEY5 395 aa16.07■□□□□ 0.16
CCM2-205ENST00000472223 RGMAQ96B86 450 aa16.07■□□□□ 0.16
CCM2-205ENST00000472223 ZNF285Q96NJ3 590 aa16.07■□□□□ 0.16
CCM2-205ENST00000472223 QRFPRQ96P65 431 aa16.07■□□□□ 0.16
CCM2-205ENST00000472223 DDA1Q9BW61 102 aa16.07■□□□□ 0.16
CCM2-205ENST00000472223 COPS7BQ9H9Q2 264 aaPredicted RBP16.07■□□□□ 0.16
CCM2-205ENST00000472223 POLR1BQ9H9Y6 1135 aa16.07■□□□□ 0.16
CCM2-205ENST00000472223 ANKHQ9HCJ1 492 aa16.07■□□□□ 0.16
CCM2-205ENST00000472223 SLCO1B3Q9NPD5 702 aa16.07■□□□□ 0.16
CCM2-205ENST00000472223 STARD5Q9NSY2 213 aa16.07■□□□□ 0.16
CCM2-205ENST00000472223 VPS29Q9UBQ0 182 aa16.07■□□□□ 0.16
CCM2-205ENST00000472223 MARCOQ9UEW3 520 aaPredicted RBP16.07■□□□□ 0.16
CCM2-205ENST00000472223 NDOR1Q9UHB4 597 aa16.07■□□□□ 0.16
CCM2-205ENST00000472223 RUVBL1Q9Y265 456 aaKnown RBP16.07■□□□□ 0.16
CCM2-205ENST00000472223 DNAJC15Q9Y5T4 150 aa16.07■□□□□ 0.16
CCM2-205ENST00000472223 ARHGAP10A1A4S6 786 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 SERTM1A2A2V5 107 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 LRIT2A6NDA9 550 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 TMEM233B4DJY2 109 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 EDF1O60869 148 aaKnown RBP16.06■□□□□ 0.16
CCM2-205ENST00000472223 VPS4BO75351 444 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 MYO1DO94832 1006 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 TNFSF15O95150 251 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 STATHP02808 62 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 LINC00032P0C843 101 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 ITIH1P19827 911 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 AVPR1BP47901 424 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 HKDC1Q2TB90 917 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 AP5B1Q2VPB7 878 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 TCHHL1Q5QJ38 904 aaPredicted RBP16.06■□□□□ 0.16
CCM2-205ENST00000472223 DEPDC1Q5TB30 811 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 SCIMPQ6UWF3 145 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 RNF165Q6ZSG1 346 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 PAGE2Q7Z2X7 111 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 TRIM46Q7Z4K8 759 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 VN1R4Q7Z5H5 301 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 BMPERQ8N8U9 685 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 OR2L5Q8NG80 312 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 GAL3ST3Q96A11 431 aa16.06■□□□□ 0.16
CCM2-205ENST00000472223 C19orf60Q96EN9 201 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms