RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 TTLQ8NG68 377 aa18.31■□□□□ 0.52
PSPC1-203ENST00000471658 MAELQ96JY0 434 aaKnown RBP18.31■□□□□ 0.52
PSPC1-203ENST00000471658 SPRTNQ9H040 489 aaPredicted RBP18.31■□□□□ 0.52
PSPC1-203ENST00000471658 OCIAD1Q9NX40 245 aa18.31■□□□□ 0.52
PSPC1-203ENST00000471658 ADGRE2Q9UHX3 823 aa18.31■□□□□ 0.52
PSPC1-203ENST00000471658 PTPRZ1P23471 2315 aaPredicted RBP18.31■□□□□ 0.52
PSPC1-203ENST00000471658 C4orf51C9J302 202 aa18.31■□□□□ 0.52
PSPC1-203ENST00000471658 RGS14O43566 566 aa18.31■□□□□ 0.52
PSPC1-203ENST00000471658 HYAL3O43820 417 aaPredicted RBP18.31■□□□□ 0.52
PSPC1-203ENST00000471658 B3GALT4O96024 378 aa18.31■□□□□ 0.52
PSPC1-203ENST00000471658 PTX3P26022 381 aaPredicted RBP18.31■□□□□ 0.52
PSPC1-203ENST00000471658 NR6A1Q15406 480 aa18.31■□□□□ 0.52
PSPC1-203ENST00000471658 GALNTL6Q49A17 601 aa18.31■□□□□ 0.52
PSPC1-203ENST00000471658 TOR1AIP1Q5JTV8 583 aa18.31■□□□□ 0.52
PSPC1-203ENST00000471658 SPDYAQ5MJ70 313 aa18.31■□□□□ 0.52
PSPC1-203ENST00000471658 DEPDC1Q5TB30 811 aa18.31■□□□□ 0.52
PSPC1-203ENST00000471658 NXNQ6DKJ4 435 aa18.31■□□□□ 0.52
PSPC1-203ENST00000471658 CSNK1A1LQ8N752 337 aa18.31■□□□□ 0.52
PSPC1-203ENST00000471658 GBP7Q8N8V2 638 aaPredicted RBP18.31■□□□□ 0.52
PSPC1-203ENST00000471658 RERGQ96A58 199 aaPredicted RBP18.31■□□□□ 0.52
PSPC1-203ENST00000471658 RNF31Q96EP0 1072 aa18.31■□□□□ 0.52
PSPC1-203ENST00000471658 CMTM7Q96FZ5 175 aa18.31■□□□□ 0.52
PSPC1-203ENST00000471658 APIPQ96GX9 242 aa18.31■□□□□ 0.52
PSPC1-203ENST00000471658 SORBS1Q9BX66 1292 aaKnown RBP18.31■□□□□ 0.52
PSPC1-203ENST00000471658 MRPL1Q9BYD6 325 aaKnown RBP18.31■□□□□ 0.52
PSPC1-203ENST00000471658 BRF2Q9HAW0 419 aa18.31■□□□□ 0.52
PSPC1-203ENST00000471658 VPS29Q9UBQ0 182 aa18.31■□□□□ 0.52
PSPC1-203ENST00000471658 A0A0G2JN53 185 aa18.3■□□□□ 0.52
PSPC1-203ENST00000471658 LRIT2A6NDA9 550 aa18.3■□□□□ 0.52
PSPC1-203ENST00000471658 TMEM150CB9EJG8 249 aa18.3■□□□□ 0.52
PSPC1-203ENST00000471658 RTCAO00442 366 aaKnown RBP18.3■□□□□ 0.52
PSPC1-203ENST00000471658 LSM1O15116 133 aaKnown RBP18.3■□□□□ 0.52
PSPC1-203ENST00000471658 MAP3K7O43318 606 aa18.3■□□□□ 0.52
PSPC1-203ENST00000471658 MT-CO3P00414 261 aa18.3■□□□□ 0.52
PSPC1-203ENST00000471658 SERPINB1P30740 379 aa18.3■□□□□ 0.52
PSPC1-203ENST00000471658 NOVA1P51513 510 aaKnown RBP18.3■□□□□ 0.52
PSPC1-203ENST00000471658 PHEXP78562 749 aa18.3■□□□□ 0.52
PSPC1-203ENST00000471658 ZNF33BQ06732 778 aa18.3■□□□□ 0.52
PSPC1-203ENST00000471658 TBL3Q12788 808 aaKnown RBP18.3■□□□□ 0.52
PSPC1-203ENST00000471658 TUBB3Q13509 450 aa18.3■□□□□ 0.52
PSPC1-203ENST00000471658 LSM12Q3MHD2 195 aaKnown RBP18.3■□□□□ 0.52
PSPC1-203ENST00000471658 TMTC4Q5T4D3 741 aa18.3■□□□□ 0.52
PSPC1-203ENST00000471658 KHDRBS2Q5VWX1 349 aaKnown RBP18.3■□□□□ 0.52
PSPC1-203ENST00000471658 TMEM198Q66K66 360 aa18.3■□□□□ 0.52
PSPC1-203ENST00000471658 LARP4Q71RC2 724 aaKnown RBP eCLIP18.3■□□□□ 0.52
PSPC1-203ENST00000471658 UBE3DQ7Z6J8 389 aa18.3■□□□□ 0.52
PSPC1-203ENST00000471658 OR1L3Q8NH93 324 aa18.3■□□□□ 0.52
PSPC1-203ENST00000471658 NT5CQ8TCD5 201 aa18.3■□□□□ 0.52
PSPC1-203ENST00000471658 BCAS4Q8TDM0 211 aa18.3■□□□□ 0.52
PSPC1-203ENST00000471658 N4BP2L2Q92802 583 aaPredicted RBP18.3■□□□□ 0.52
PSPC1-203ENST00000471658 CCT7Q99832 543 aa18.3■□□□□ 0.52
PSPC1-203ENST00000471658 SLC6A16Q9GZN6 736 aa18.3■□□□□ 0.52
PSPC1-203ENST00000471658 RUVBL1Q9Y265 456 aaKnown RBP18.3■□□□□ 0.52
PSPC1-203ENST00000471658 MRPS2Q9Y399 296 aaKnown RBP18.3■□□□□ 0.52
PSPC1-203ENST00000471658 SRPX2O60687 465 aaPredicted RBP18.29■□□□□ 0.52
PSPC1-203ENST00000471658 DKK1O94907 266 aa18.29■□□□□ 0.52
PSPC1-203ENST00000471658 SERPINA6P08185 405 aa18.29■□□□□ 0.52
PSPC1-203ENST00000471658 HSD3B1P14060 373 aa18.29■□□□□ 0.52
PSPC1-203ENST00000471658 HSD3B2P26439 372 aa18.29■□□□□ 0.52
PSPC1-203ENST00000471658 TRA2AQ13595 282 aaKnown RBP eCLIP18.29■□□□□ 0.521e-6■■■□□ 17.1
PSPC1-203ENST00000471658 PWP1Q13610 501 aa18.29■□□□□ 0.52
PSPC1-203ENST00000471658 AP5B1Q2VPB7 878 aa18.29■□□□□ 0.52
PSPC1-203ENST00000471658 RFTN2Q52LD8 501 aaPredicted RBP18.29■□□□□ 0.52
PSPC1-203ENST00000471658 C6orf136Q5SQH8 315 aa18.29■□□□□ 0.52
PSPC1-203ENST00000471658 C10orf62Q5T681 223 aaPredicted RBP18.29■□□□□ 0.52
PSPC1-203ENST00000471658 HES3Q5TGS1 186 aa18.29■□□□□ 0.52
PSPC1-203ENST00000471658 PRAMEF17Q5VTA0 474 aa18.29■□□□□ 0.52
PSPC1-203ENST00000471658 CAMKVQ8NCB2 501 aa18.29■□□□□ 0.52
PSPC1-203ENST00000471658 ZNF501Q96CX3 271 aaPredicted RBP18.29■□□□□ 0.52
PSPC1-203ENST00000471658 MS4A6EQ96DS6 147 aa18.29■□□□□ 0.52
PSPC1-203ENST00000471658 RILPQ96NA2 401 aa18.29■□□□□ 0.52
PSPC1-203ENST00000471658 ZNF285Q96NJ3 590 aa18.29■□□□□ 0.52
PSPC1-203ENST00000471658 TMEM74Q96NL1 305 aa18.29■□□□□ 0.52
PSPC1-203ENST00000471658 SERPINI1Q99574 410 aa18.29■□□□□ 0.52
PSPC1-203ENST00000471658 LRTM1Q9HBL6 345 aa18.29■□□□□ 0.52
PSPC1-203ENST00000471658 FGF21Q9NSA1 209 aa18.29■□□□□ 0.52
PSPC1-203ENST00000471658 RIC8BQ9NVN3 520 aa18.29■□□□□ 0.52
PSPC1-203ENST00000471658 PSD3Q9NYI0 1048 aa18.29■□□□□ 0.52
PSPC1-203ENST00000471658 CDV3Q9UKY7 258 aaKnown RBP18.29■□□□□ 0.52
PSPC1-203ENST00000471658 G3BP2Q9UN86 482 aaKnown RBP18.29■□□□□ 0.52
PSPC1-203ENST00000471658 H3BMH7 237 aa18.28■□□□□ 0.52
PSPC1-203ENST00000471658 SEC22BO75396 215 aa18.28■□□□□ 0.52
PSPC1-203ENST00000471658 MED26O95402 600 aa18.28■□□□□ 0.52
PSPC1-203ENST00000471658 PRR35P0CG20 571 aa18.28■□□□□ 0.52
PSPC1-203ENST00000471658 CCL4P13236 92 aa18.28■□□□□ 0.52
PSPC1-203ENST00000471658 CEACAM1P13688 526 aa18.28■□□□□ 0.52
PSPC1-203ENST00000471658 GSTM2P28161 218 aa18.28■□□□□ 0.52
PSPC1-203ENST00000471658 PLA2G16P53816 162 aa18.28■□□□□ 0.52
PSPC1-203ENST00000471658 RAB8AP61006 207 aa18.28■□□□□ 0.52
PSPC1-203ENST00000471658 KIAA0040Q15053 153 aa18.28■□□□□ 0.52
PSPC1-203ENST00000471658 RSPO4Q2I0M5 234 aaPredicted RBP18.28■□□□□ 0.52
PSPC1-203ENST00000471658 ISXQ2M1V0 245 aa18.28■□□□□ 0.52
PSPC1-203ENST00000471658 PRTGQ2VWP7 1150 aa18.28■□□□□ 0.52
PSPC1-203ENST00000471658 ADPRMQ3LIE5 342 aa18.28■□□□□ 0.52
PSPC1-203ENST00000471658 RIPOR1Q6ZS17 1223 aa18.28■□□□□ 0.52
PSPC1-203ENST00000471658 CHSY3Q70JA7 882 aa18.28■□□□□ 0.52
PSPC1-203ENST00000471658 AMER3Q8N944 861 aa18.28■□□□□ 0.52
PSPC1-203ENST00000471658 ZCCHC10Q8TBK6 192 aa18.28■□□□□ 0.52
PSPC1-203ENST00000471658 ACTRT2Q8TDY3 377 aa18.28■□□□□ 0.52
PSPC1-203ENST00000471658 CHTF18Q8WVB6 975 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms