RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 UBE2E3Q969T4 207 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 NACC2Q96BF6 587 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 PHF21BQ96EK2 531 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 MOCOSQ96EN8 888 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 MMABQ96EY8 250 aaPredicted RBP14.52□□□□□ -0.09
SDC3-203ENST00000471567 IP6K3Q96PC2 410 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 TMEM109Q9BVC6 243 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 SLC6A16Q9GZN6 736 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 ANKHQ9HCJ1 492 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 ZNF282Q9UDV7 671 aaPredicted RBP14.52□□□□□ -0.09
SDC3-203ENST00000471567 MAP4K5Q9Y4K4 846 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 ITPR1Q14643 2758 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 CFAP47Q6ZTR5 3102 aa14.52□□□□□ -0.09
SDC3-203ENST00000471567 ANKDD1BA6NHY2 528 aa14.51□□□□□ -0.09
SDC3-203ENST00000471567 E2F3O00716 465 aa14.51□□□□□ -0.09
SDC3-203ENST00000471567 UGDHO60701 494 aa14.51□□□□□ -0.09
SDC3-203ENST00000471567 GLRA3O75311 464 aa14.51□□□□□ -0.09
SDC3-203ENST00000471567 CLEC3AO75596 197 aa14.51□□□□□ -0.09
SDC3-203ENST00000471567 SIX3O95343 332 aaPredicted RBP14.51□□□□□ -0.09
SDC3-203ENST00000471567 SERPIND1P05546 499 aa14.51□□□□□ -0.09
SDC3-203ENST00000471567 FURINP09958 794 aa14.51□□□□□ -0.09
SDC3-203ENST00000471567 CD22P20273 847 aa14.51□□□□□ -0.09
SDC3-203ENST00000471567 EEF1DP29692 281 aaKnown RBP14.51□□□□□ -0.09
SDC3-203ENST00000471567 HPDP32754 393 aaPredicted RBP14.51□□□□□ -0.09
SDC3-203ENST00000471567 HNF4AP41235 474 aa14.51□□□□□ -0.09
SDC3-203ENST00000471567 CCT5P48643 541 aa14.51□□□□□ -0.09
SDC3-203ENST00000471567 SKP1P63208 163 aa14.51□□□□□ -0.09
SDC3-203ENST00000471567 IL10RAQ13651 578 aa14.51□□□□□ -0.09
SDC3-203ENST00000471567 GTF2H2Q13888 395 aa14.51□□□□□ -0.09
SDC3-203ENST00000471567 LIPJQ5W064 366 aa14.51□□□□□ -0.09
SDC3-203ENST00000471567 GTF2H2CQ6P1K8 395 aa14.51□□□□□ -0.09
SDC3-203ENST00000471567 BORAQ6PGQ7 559 aa14.51□□□□□ -0.09
SDC3-203ENST00000471567 ABHD13Q7L211 337 aa14.51□□□□□ -0.09
SDC3-203ENST00000471567 GOLGA7Q7Z5G4 137 aa14.51□□□□□ -0.09
SDC3-203ENST00000471567 RAB43Q86YS6 212 aa14.51□□□□□ -0.09
SDC3-203ENST00000471567 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.51□□□□□ -0.09
SDC3-203ENST00000471567 AMER3Q8N944 861 aa14.51□□□□□ -0.09
SDC3-203ENST00000471567 OR9A4Q8NGU2 314 aa14.51□□□□□ -0.09
SDC3-203ENST00000471567 SPSB2Q99619 263 aa14.51□□□□□ -0.09
SDC3-203ENST00000471567 TGIF2Q9GZN2 237 aa14.51□□□□□ -0.09
SDC3-203ENST00000471567 RHBGQ9H310 441 aa14.51□□□□□ -0.09
SDC3-203ENST00000471567 CLK4Q9HAZ1 481 aaKnown RBP14.51□□□□□ -0.09
SDC3-203ENST00000471567 MKKSQ9NPJ1 570 aaPredicted RBP14.51□□□□□ -0.09
SDC3-203ENST00000471567 LGALS13Q9UHV8 139 aa14.51□□□□□ -0.09
SDC3-203ENST00000471567 ZNF490Q9ULM2 529 aaPredicted RBP14.51□□□□□ -0.09
SDC3-203ENST00000471567 LRRC14BA6NHZ5 514 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 A8MT66 165 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 IGHEP01854 428 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 ATXN8OSP0DMR3 200 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 ALOX12P18054 663 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 IL1RNP18510 177 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 SERPINB1P30740 379 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 CRHR1P34998 444 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 STXBP1P61764 594 aaKnown RBP14.5□□□□□ -0.09
SDC3-203ENST00000471567 SLC18A2Q05940 514 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 HYAL2Q12891 473 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 DEFB109BQ30KR1 87 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 ATP1A1-AS1Q5TC04 95 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 GRHL2Q6ISB3 625 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 MED27Q6P2C8 311 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 LAS2Q8IYD9 372 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 ZCCHC10Q8TBK6 192 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 STT3BQ8TCJ2 826 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 UTP15Q8TED0 518 aaKnown RBP14.5□□□□□ -0.09
SDC3-203ENST00000471567 APOBEC4Q8WW27 367 aaKnown RBP14.5□□□□□ -0.09
SDC3-203ENST00000471567 MIEF2Q96C03 454 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 C1QTNF3Q9BXJ4 246 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 IPPKQ9H8X2 491 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 C14orf105Q9NVL8 296 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 TRPC4Q9UBN4 977 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 CTSFQ9UBX1 484 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 ADGRE2Q9UHX3 823 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 PCTPQ9UKL6 214 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 GRID1Q9ULK0 1009 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 PLAAQ9Y263 795 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 TSC22D4Q9Y3Q8 395 aa14.5□□□□□ -0.09
SDC3-203ENST00000471567 ATXN7O15265 892 aaPredicted RBP14.49□□□□□ -0.09
SDC3-203ENST00000471567 GALR3O60755 368 aaPredicted RBP14.49□□□□□ -0.09
SDC3-203ENST00000471567 ERLIN1O75477 346 aa14.49□□□□□ -0.09
SDC3-203ENST00000471567 KLHL18O94889 574 aa14.49□□□□□ -0.09
SDC3-203ENST00000471567 UMODP07911 640 aa14.49□□□□□ -0.09
SDC3-203ENST00000471567 RPS17P08708 135 aaKnown RBP14.49□□□□□ -0.09
SDC3-203ENST00000471567 ZGLP1P0C6A0 271 aa14.49□□□□□ -0.09
SDC3-203ENST00000471567 SMIM10L1P0DMW3 83 aa14.49□□□□□ -0.09
SDC3-203ENST00000471567 KRT4P19013 534 aa14.49□□□□□ -0.09
SDC3-203ENST00000471567 ATP5F1P24539 256 aaPredicted RBP14.49□□□□□ -0.09
SDC3-203ENST00000471567 CCR10P46092 362 aa14.49□□□□□ -0.09
SDC3-203ENST00000471567 SNRPNP63162 240 aaKnown RBP14.49□□□□□ -0.09
SDC3-203ENST00000471567 LINC00303Q3SY05 128 aa14.49□□□□□ -0.09
SDC3-203ENST00000471567 CCDC153Q494R4 210 aa14.49□□□□□ -0.09
SDC3-203ENST00000471567 FAM69BQ5VUD6 431 aa14.49□□□□□ -0.09
SDC3-203ENST00000471567 PRSS41Q7RTY9 318 aa14.49□□□□□ -0.09
SDC3-203ENST00000471567 SLC22A9Q8IVM8 553 aa14.49□□□□□ -0.09
SDC3-203ENST00000471567 L3MBTL4Q8NA19 623 aa14.49□□□□□ -0.09
SDC3-203ENST00000471567 EXTL1Q92935 676 aa14.49□□□□□ -0.09
SDC3-203ENST00000471567 SMIM10Q96HG1 83 aa14.49□□□□□ -0.09
SDC3-203ENST00000471567 NTMT1Q9BV86 223 aa14.49□□□□□ -0.09
SDC3-203ENST00000471567 YIPF2Q9BWQ6 316 aa14.49□□□□□ -0.09
SDC3-203ENST00000471567 ACTR8Q9H981 624 aa14.49□□□□□ -0.09
SDC3-203ENST00000471567 SEMA3GQ9NS98 782 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms