RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 FRG2BQ96QU4 278 aa12.03□□□□□ -0.48
SND1-209ENST00000470723 DPH2Q9BQC3 489 aaPredicted RBP12.03□□□□□ -0.48
SND1-209ENST00000470723 NLNQ9BYT8 704 aa12.03□□□□□ -0.48
SND1-209ENST00000470723 AICDAQ9GZX7 198 aa12.03□□□□□ -0.48
SND1-209ENST00000470723 CLK4Q9HAZ1 481 aaKnown RBP12.03□□□□□ -0.48
SND1-209ENST00000470723 EML4Q9HC35 981 aaKnown RBP12.03□□□□□ -0.48
SND1-209ENST00000470723 THSD1Q9NS62 852 aa12.03□□□□□ -0.48
SND1-209ENST00000470723 FOXJ2Q9P0K8 574 aa12.03□□□□□ -0.48
SND1-209ENST00000470723 HAO1Q9UJM8 370 aa12.03□□□□□ -0.48
SND1-209ENST00000470723 SRPK3Q9UPE1 567 aa12.03□□□□□ -0.48
SND1-209ENST00000470723 RUVBL1Q9Y265 456 aaKnown RBP12.03□□□□□ -0.48
SND1-209ENST00000470723 AK5Q9Y6K8 562 aa12.03□□□□□ -0.48
SND1-209ENST00000470723 SDK2Q58EX2 2172 aa12.03□□□□□ -0.48
SND1-209ENST00000470723 CHD8Q9HCK8 2581 aa12.02□□□□□ -0.48
SND1-209ENST00000470723 WDR91A4D1P6 747 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 AGRPO00253 132 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 DSCR3O14972 297 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 P2RX6O15547 441 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 OR4F21O95013 312 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 MED26O95402 600 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 EIF2S1P05198 315 aaKnown RBP12.02□□□□□ -0.49
SND1-209ENST00000470723 HPDP32754 393 aaPredicted RBP12.02□□□□□ -0.49
SND1-209ENST00000470723 CCR10P46092 362 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 CYP4F3Q08477 520 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 GPS2Q13227 327 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 CUL3Q13618 768 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 CHI3L2Q15782 390 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 RBBP7Q16576 425 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 MUM1Q2TAK8 710 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 HKDC1Q2TB90 917 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 UGT3A2Q3SY77 523 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 TMEM35AQ53FP2 167 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 HSP90B2PQ58FF3 399 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 DEPDC1Q5TB30 811 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 PRAMEF17Q5VTA0 474 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 FOXR1Q6PIV2 292 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 TIPARPQ7Z3E1 657 aaKnown RBP12.02□□□□□ -0.49
SND1-209ENST00000470723 TRIM42Q8IWZ5 723 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.02□□□□□ -0.492e-6■■■■■ 163.7
SND1-209ENST00000470723 CLYBLQ8N0X4 340 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 TTC29Q8NA56 475 aaPredicted RBP12.02□□□□□ -0.49
SND1-209ENST00000470723 METTL6Q8TCB7 284 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 PROKR1Q8TCW9 393 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 FGF11Q92914 225 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 MS4A6EQ96DS6 147 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 CMTM7Q96FZ5 175 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 C10orf90Q96M02 699 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 GBP5Q96PP8 586 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 NDC1Q9BTX1 674 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 MS4A8Q9BY19 250 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 ACTR5Q9H9F9 607 aaPredicted RBP12.02□□□□□ -0.49
SND1-209ENST00000470723 BRF2Q9HAW0 419 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 TNFRSF12AQ9NP84 129 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 MID1IP1Q9NPA3 183 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 STARD5Q9NSY2 213 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 CUTCQ9NTM9 273 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 SNX6Q9UNH7 406 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 SSUH2Q9Y2M2 353 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 TPRP12270 2363 aaKnown RBP12.02□□□□□ -0.49
SND1-209ENST00000470723 ACACBO00763 2458 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 DMXL2Q8TDJ6 3036 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 URB1O60287 2271 aaKnown RBP12.02□□□□□ -0.49
SND1-209ENST00000470723 ACACAQ13085 2346 aa12.02□□□□□ -0.49
SND1-209ENST00000470723 FER1L5A0AVI2 2057 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 URADA6NGE7 173 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 NPIPB8E9PQR5 432 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 MEN1O00255 615 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 MANBAO00462 879 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 FOXS1O43638 330 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 CPNE3O75131 537 aaKnown RBP12.01□□□□□ -0.49
SND1-209ENST00000470723 SNNO75324 88 aaPredicted RBP12.01□□□□□ -0.49
SND1-209ENST00000470723 ULK1O75385 1050 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 STK17BO94768 372 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 KIAA0754O94854 1291 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 KRT6AP02538 564 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 KRT6BP04259 564 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 NTRK1P04629 796 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 CAPN1P07384 714 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 SLC35G6P0C7Q6 338 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 UROSP10746 265 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 HSD3B1P14060 373 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 NR1D1P20393 614 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 BGNP21810 368 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 HSD3B2P26439 372 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 KRT6CP48668 564 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 ABCE1P61221 599 aaKnown RBP12.01□□□□□ -0.49
SND1-209ENST00000470723 STXBP1P61764 594 aaKnown RBP12.01□□□□□ -0.49
SND1-209ENST00000470723 RGS1Q08116 209 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 STX3Q13277 289 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 NDUFA9Q16795 377 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 NIPAL1Q6NVV3 410 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 PRMT9Q6P2P2 845 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 C6orf15Q6UXA7 325 aaPredicted RBP12.01□□□□□ -0.49
SND1-209ENST00000470723 ZCCHC23Q6ZST2 131 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 CHSY3Q70JA7 882 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 MED25Q71SY5 747 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 TRIM46Q7Z4K8 759 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 CUZD1Q86UP6 607 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 TMEM126BQ8IUX1 230 aa12.01□□□□□ -0.49
SND1-209ENST00000470723 DSELQ8IZU8 1212 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms