RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 TAAR6Q96RI8 345 aa15.38■□□□□ 0.05
COL9A3-208ENST00000469802 TRIM31Q9BZY9 425 aa15.38■□□□□ 0.05
COL9A3-208ENST00000469802 RNF14Q9UBS8 474 aa15.38■□□□□ 0.05
COL9A3-208ENST00000469802 C19orf25Q9UFG5 118 aaPredicted RBP15.38■□□□□ 0.05
COL9A3-208ENST00000469802 PYCARDQ9ULZ3 195 aa15.38■□□□□ 0.05
COL9A3-208ENST00000469802 IGHV3-20A0A0C4DH32 117 aa15.37■□□□□ 0.05
COL9A3-208ENST00000469802 A1L4Q6 167 aa15.37■□□□□ 0.05
COL9A3-208ENST00000469802 PABPN1LA6NDY0 278 aaKnown RBP15.37■□□□□ 0.05
COL9A3-208ENST00000469802 NPEPPSL1A6NEC2 478 aa15.37■□□□□ 0.05
COL9A3-208ENST00000469802 OR2W5A6NFC9 320 aa15.37■□□□□ 0.05
COL9A3-208ENST00000469802 ZNF860A6NHJ4 632 aa15.37■□□□□ 0.05
COL9A3-208ENST00000469802 EFCAB8A8MWE9 144 aa15.37■□□□□ 0.05
COL9A3-208ENST00000469802 OR1F1O43749 312 aa15.37■□□□□ 0.05
COL9A3-208ENST00000469802 GALR3O60755 368 aaPredicted RBP15.37■□□□□ 0.05
COL9A3-208ENST00000469802 WFS1O76024 890 aa15.37■□□□□ 0.05
COL9A3-208ENST00000469802 WISP3O95389 354 aaPredicted RBP15.37■□□□□ 0.05
COL9A3-208ENST00000469802 CLDN1O95832 211 aa15.37■□□□□ 0.05
COL9A3-208ENST00000469802 GUCA1CO95843 209 aa15.37■□□□□ 0.05
COL9A3-208ENST00000469802 WDPCPO95876 746 aa15.37■□□□□ 0.05
COL9A3-208ENST00000469802 IL10P22301 178 aa15.37■□□□□ 0.05
COL9A3-208ENST00000469802 AHRP35869 848 aa15.37■□□□□ 0.05
COL9A3-208ENST00000469802 SCTRP47872 440 aa15.37■□□□□ 0.05
COL9A3-208ENST00000469802 AGTR2P50052 363 aa15.37■□□□□ 0.05
COL9A3-208ENST00000469802 TDGF1P3P51864 188 aa15.37■□□□□ 0.05
COL9A3-208ENST00000469802 TAS2R39P59534 338 aa15.37■□□□□ 0.05
COL9A3-208ENST00000469802 CDKL1Q00532 357 aa15.37■□□□□ 0.05
COL9A3-208ENST00000469802 ZNF460Q14592 562 aa15.37■□□□□ 0.05
COL9A3-208ENST00000469802 MFSD4BQ5TF39 518 aa15.37■□□□□ 0.05
COL9A3-208ENST00000469802 H3F3CQ6NXT2 135 aa15.37■□□□□ 0.05
COL9A3-208ENST00000469802 MAMDC2Q7Z304 686 aaPredicted RBP15.37■□□□□ 0.05
COL9A3-208ENST00000469802 BCORP1Q8N888 145 aa15.37■□□□□ 0.05
COL9A3-208ENST00000469802 OR5T3Q8NGG3 340 aa15.37■□□□□ 0.05
COL9A3-208ENST00000469802 RHOJQ9H4E5 214 aa15.37■□□□□ 0.05
COL9A3-208ENST00000469802 OLAHQ9NV23 265 aa15.37■□□□□ 0.05
COL9A3-208ENST00000469802 ZFP69BQ9UJL9 534 aa15.37■□□□□ 0.05
COL9A3-208ENST00000469802 CENPEQ02224 2701 aa15.36■□□□□ 0.05
COL9A3-208ENST00000469802 CTAGE15A4D2H0 777 aa15.36■□□□□ 0.05
COL9A3-208ENST00000469802 OR5H15A6NDH6 313 aa15.36■□□□□ 0.05
COL9A3-208ENST00000469802 CDC7O00311 574 aa15.36■□□□□ 0.05
COL9A3-208ENST00000469802 ALOX12P18054 663 aa15.36■□□□□ 0.05
COL9A3-208ENST00000469802 PAFAH1B1P43034 410 aa15.36■□□□□ 0.05
COL9A3-208ENST00000469802 C4orf17Q53FE4 359 aa15.36■□□□□ 0.05
COL9A3-208ENST00000469802 ABHD17BQ5VST6 288 aa15.36■□□□□ 0.05
COL9A3-208ENST00000469802 CTAGE6Q86UF2 777 aa15.36■□□□□ 0.05
COL9A3-208ENST00000469802 THOC6Q86W42 341 aaKnown RBP15.36■□□□□ 0.05
COL9A3-208ENST00000469802 NKAPQ8N5F7 415 aaKnown RBP15.36■□□□□ 0.05
COL9A3-208ENST00000469802 ANKRD53Q8N9V6 530 aa15.36■□□□□ 0.05
COL9A3-208ENST00000469802 PLPP5Q8NEB5 264 aa15.36■□□□□ 0.05
COL9A3-208ENST00000469802 ANKRD49Q8WVL7 239 aa15.36■□□□□ 0.05
COL9A3-208ENST00000469802 NR4A3Q92570 626 aa15.36■□□□□ 0.05
COL9A3-208ENST00000469802 VPS39Q96JC1 886 aa15.36■□□□□ 0.05
COL9A3-208ENST00000469802 TSNARE1Q96NA8 513 aa15.36■□□□□ 0.05
COL9A3-208ENST00000469802 KRT12Q99456 494 aa15.36■□□□□ 0.05
COL9A3-208ENST00000469802 RBCK1Q9BYM8 510 aa15.36■□□□□ 0.05
COL9A3-208ENST00000469802 PELI2Q9HAT8 420 aa15.36■□□□□ 0.05
COL9A3-208ENST00000469802 POPDC3Q9HBV1 291 aa15.36■□□□□ 0.05
COL9A3-208ENST00000469802 ITPR2Q14571 2701 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 CRYBG3Q68DQ2 2970 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 MAGEB17A8MXT2 336 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 NDC80O14777 642 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 F10P00742 488 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 SKP1P63208 163 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 ZNF33BQ06732 778 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 RGS1Q08116 209 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 HYAL2Q12891 473 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 CSHL1Q14406 222 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 ABRAXAS2Q15018 415 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 EXT1Q16394 746 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 BTBD16Q32M84 506 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 DEFB134Q4QY38 66 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 NIPAL1Q6NVV3 410 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 ADAMTSL2Q86TH1 951 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 CEP97Q8IW35 865 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 KLHDC8AQ8IYD2 350 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 ZBED8Q8IZ13 594 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 TBC1D19Q8N5T2 526 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 UTP15Q8TED0 518 aaKnown RBP15.35■□□□□ 0.05
COL9A3-208ENST00000469802 TSLPQ969D9 159 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 PEX11GQ96HA9 241 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 SLC6A16Q9GZN6 736 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 SMYD2Q9NRG4 433 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 NSMCE4AQ9NXX6 385 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 TEKT2Q9UIF3 430 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 SNX24Q9Y343 169 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 OARD1Q9Y530 152 aa15.35■□□□□ 0.05
COL9A3-208ENST00000469802 C4orf51C9J302 202 aa15.34■□□□□ 0.05
COL9A3-208ENST00000469802 DNAJB6O75190 326 aa15.34■□□□□ 0.05
COL9A3-208ENST00000469802 CDC123O75794 336 aaPredicted RBP15.34■□□□□ 0.05
COL9A3-208ENST00000469802 B3GALT4O96024 378 aa15.34■□□□□ 0.05
COL9A3-208ENST00000469802 FHP07954 510 aa15.34■□□□□ 0.05
COL9A3-208ENST00000469802 STSP08842 583 aa15.34■□□□□ 0.05
COL9A3-208ENST00000469802 ZNF888P0CJ79 500 aaPredicted RBP15.34■□□□□ 0.05
COL9A3-208ENST00000469802 SAT1P21673 171 aa15.34■□□□□ 0.05
COL9A3-208ENST00000469802 SLC6A12P48065 614 aa15.34■□□□□ 0.05
COL9A3-208ENST00000469802 HNMTP50135 292 aa15.34■□□□□ 0.05
COL9A3-208ENST00000469802 ILF2Q12905 390 aaKnown RBP15.34■□□□□ 0.05
COL9A3-208ENST00000469802 SFT2D3Q587I9 215 aa15.34■□□□□ 0.05
COL9A3-208ENST00000469802 PAPD4Q6PIY7 484 aaKnown RBP15.34■□□□□ 0.05
COL9A3-208ENST00000469802 NXPE4Q6UWF7 544 aa15.34■□□□□ 0.05
COL9A3-208ENST00000469802 ABHD13Q7L211 337 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms