RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 LRTM1Q9HBL6 345 aa16.72■□□□□ 0.27
RPL39-202ENST00000468844 C1orf109Q9NX04 203 aa16.72■□□□□ 0.27
RPL39-202ENST00000468844 SEMA5BQ9P283 1151 aa16.72■□□□□ 0.27
RPL39-202ENST00000468844 LOC105369274A0A096LPK9 316 aa16.72■□□□□ 0.27
RPL39-202ENST00000468844 LOC102723532A0A0G2JNH3 316 aa16.72■□□□□ 0.27
RPL39-202ENST00000468844 KIAA0754O94854 1291 aa16.72■□□□□ 0.27
RPL39-202ENST00000468844 ZBTB11O95625 1053 aaPredicted RBP16.72■□□□□ 0.27
RPL39-202ENST00000468844 SERPIND1P05546 499 aa16.72■□□□□ 0.27
RPL39-202ENST00000468844 GP1BAP07359 652 aa16.72■□□□□ 0.27
RPL39-202ENST00000468844 NCF2P19878 526 aaPredicted RBP16.72■□□□□ 0.27
RPL39-202ENST00000468844 DIO3P55073 304 aa16.72■□□□□ 0.27
RPL39-202ENST00000468844 ERVK-8P63133 956 aa16.72■□□□□ 0.27
RPL39-202ENST00000468844 TBL3Q12788 808 aaKnown RBP16.72■□□□□ 0.27
RPL39-202ENST00000468844 DEFB110Q30KQ9 67 aa16.72■□□□□ 0.27
RPL39-202ENST00000468844 OR4N4Q8N0Y3 316 aa16.72■□□□□ 0.27
RPL39-202ENST00000468844 FITM2Q8N6M3 262 aa16.72■□□□□ 0.27
RPL39-202ENST00000468844 TRPV3Q8NET8 790 aa16.72■□□□□ 0.27
RPL39-202ENST00000468844 C11orf24Q96F05 449 aaPredicted RBP16.72■□□□□ 0.27
RPL39-202ENST00000468844 CMTM7Q96FZ5 175 aa16.72■□□□□ 0.27
RPL39-202ENST00000468844 TCTN2Q96GX1 697 aa16.72■□□□□ 0.27
RPL39-202ENST00000468844 SYNDIG1Q9H7V2 258 aa16.72■□□□□ 0.27
RPL39-202ENST00000468844 G3BP2Q9UN86 482 aaKnown RBP16.72■□□□□ 0.27
RPL39-202ENST00000468844 SAP18O00422 153 aaKnown RBP16.71■□□□□ 0.27
RPL39-202ENST00000468844 UBDO15205 165 aa16.71■□□□□ 0.27
RPL39-202ENST00000468844 SEC22BO75396 215 aa16.71■□□□□ 0.27
RPL39-202ENST00000468844 DCTN3O75935 186 aa16.71■□□□□ 0.27
RPL39-202ENST00000468844 PTX3P26022 381 aaPredicted RBP16.71■□□□□ 0.27
RPL39-202ENST00000468844 HNRNPH1P31943 449 aaKnown RBP16.71■□□□□ 0.27
RPL39-202ENST00000468844 SEPHS1P49903 392 aa16.71■□□□□ 0.27
RPL39-202ENST00000468844 CUL3Q13618 768 aa16.71■□□□□ 0.27
RPL39-202ENST00000468844 KHDRBS2Q5VWX1 349 aaKnown RBP16.71■□□□□ 0.27
RPL39-202ENST00000468844 PRSS42Q7Z5A4 293 aa16.71■□□□□ 0.27
RPL39-202ENST00000468844 PACS2Q86VP3 889 aa16.71■□□□□ 0.27
RPL39-202ENST00000468844 ZFAND4Q86XD8 727 aa16.71■□□□□ 0.27
RPL39-202ENST00000468844 SLC13A3Q8WWT9 602 aa16.71■□□□□ 0.27
RPL39-202ENST00000468844 TM4SF19Q96DZ7 209 aa16.71■□□□□ 0.27
RPL39-202ENST00000468844 LRRC37BQ96QE4 947 aa16.71■□□□□ 0.27
RPL39-202ENST00000468844 MYLK2Q9H1R3 596 aa16.71■□□□□ 0.27
RPL39-202ENST00000468844 SAR1AQ9NR31 198 aa16.71■□□□□ 0.27
RPL39-202ENST00000468844 SOHLH2Q9NX45 425 aa16.71■□□□□ 0.27
RPL39-202ENST00000468844 TRIM33Q9UPN9 1127 aa16.71■□□□□ 0.27
RPL39-202ENST00000468844 LRIT2A6NDA9 550 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 NTN3O00634 580 aaPredicted RBP16.7■□□□□ 0.26
RPL39-202ENST00000468844 FCHO1O14526 889 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 P2RX6O15547 441 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 FOXD2O60548 495 aaPredicted RBP16.7■□□□□ 0.26
RPL39-202ENST00000468844 GABRA4P48169 554 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 ACADVLP49748 655 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 UBAP2LQ14157 1087 aaKnown RBP16.7■□□□□ 0.26
RPL39-202ENST00000468844 ADPRMQ3LIE5 342 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 DEPDC1Q5TB30 811 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 C6orf89Q6UWU4 347 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 ASCL5Q7RTU5 278 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 ASPGQ86U10 573 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 OR4D9Q8NGE8 314 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 F2RL3Q96RI0 385 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 SERPINI1Q99574 410 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 CHRNA10Q9GZZ6 450 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 ZNF385DQ9H6B1 395 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 ARMCX1Q9P291 453 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 PDP2Q9P2J9 529 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 POLR3HQ9Y535 204 aaPredicted RBP16.7■□□□□ 0.26
RPL39-202ENST00000468844 A8MU76 341 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 C4orf51C9J302 202 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 H0YGG7 62 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 PLPP1O14494 284 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 CTSBP07858 339 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 SLC35G6P0C7Q6 338 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 THRAP10827 490 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 MLLT3P42568 568 aaPredicted RBP16.7■□□□□ 0.26
RPL39-202ENST00000468844 ARF3P61204 181 aaPredicted RBP16.7■□□□□ 0.26
RPL39-202ENST00000468844 EMX2Q04743 252 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 HKDC1Q2TB90 917 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 STPG1Q5TH74 334 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 DNAJC22Q8N4W6 341 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 ERP27Q96DN0 273 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 THAP11Q96EK4 314 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 GFM1Q96RP9 751 aaKnown RBP16.7■□□□□ 0.26
RPL39-202ENST00000468844 ZNF717Q9BY31 904 aaPredicted RBP16.7■□□□□ 0.26
RPL39-202ENST00000468844 SLC6A16Q9GZN6 736 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 REXO4Q9GZR2 422 aaKnown RBP16.7■□□□□ 0.26
RPL39-202ENST00000468844 KLHL31Q9H511 634 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 PDE7BQ9NP56 450 aa16.7■□□□□ 0.26
RPL39-202ENST00000468844 COPG1Q9Y678 874 aaKnown RBP16.7■□□□□ 0.26
RPL39-202ENST00000468844 IGHV5-10-1A0A0J9YXX1 117 aa16.69■□□□□ 0.26
RPL39-202ENST00000468844 D6RAR5 112 aa16.69■□□□□ 0.26
RPL39-202ENST00000468844 TOX3O15405 576 aaPredicted RBP16.69■□□□□ 0.26
RPL39-202ENST00000468844 HSD11B2P80365 405 aa16.69■□□□□ 0.26
RPL39-202ENST00000468844 NHLH1Q02575 133 aa16.69■□□□□ 0.26
RPL39-202ENST00000468844 ACSM2AQ08AH3 577 aa16.69■□□□□ 0.26
RPL39-202ENST00000468844 KCNAB1Q14722 419 aa16.69■□□□□ 0.26
RPL39-202ENST00000468844 SMU1Q2TAY7 513 aa16.69■□□□□ 0.26
RPL39-202ENST00000468844 SPIN4Q56A73 249 aa16.69■□□□□ 0.26
RPL39-202ENST00000468844 ACSM2BQ68CK6 577 aa16.69■□□□□ 0.26
RPL39-202ENST00000468844 DGLUCYQ7Z3D6 616 aa16.69■□□□□ 0.26
RPL39-202ENST00000468844 CLNKQ7Z7G1 428 aa16.69■□□□□ 0.26
RPL39-202ENST00000468844 C1orf52Q8N6N3 182 aaKnown RBP16.69■□□□□ 0.26
RPL39-202ENST00000468844 KCT2Q8NC54 265 aa16.69■□□□□ 0.26
RPL39-202ENST00000468844 RCBTB1Q8NDN9 531 aa16.69■□□□□ 0.26
RPL39-202ENST00000468844 CHTF18Q8WVB6 975 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms