RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 PRAMEF11O60813 436 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 MED24O75448 989 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 KHDRBS3O75525 346 aaKnown RBP2.96□□□□□ -1.94
XRN1-206ENST00000467077 BEST1O76090 585 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 GPIP06744 558 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 HOXB7P09629 217 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 FOSL2P15408 326 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 CA6P23280 308 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 SLC6A6P31641 620 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 GABRA5P31644 462 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 RAD52P43351 418 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 PDX1P52945 283 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 TCP10Q12799 353 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 STK4Q13043 487 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 KCTD2Q14681 263 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 CFAP58Q5T655 872 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 IL27RAQ6UWB1 636 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 COMMD2Q86X83 199 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 CEP57L1Q8IYX8 460 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 NME8Q8N427 588 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 CCDC89Q8N998 374 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 POC5Q8NA72 575 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 IRGQQ8WZA9 623 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 FNBP1Q96RU3 617 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 CENPOQ9BU64 300 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 KIFC3Q9BVG8 833 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 OSGEPL1Q9H4B0 414 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 ANKEF1Q9NU02 776 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 ZNF701Q9NV72 531 aaPredicted RBP2.96□□□□□ -1.94
XRN1-206ENST00000467077 PSD3Q9NYI0 1048 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 NUDT4Q9NZJ9 180 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 TMOD2Q9NZR1 351 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 THEGQ9P2T0 379 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 RPS6KA6Q9UK32 745 aa2.96□□□□□ -1.94
XRN1-206ENST00000467077 ZHX1Q9UKY1 873 aaPredicted RBP2.96□□□□□ -1.94
XRN1-206ENST00000467077 KLF11O14901 512 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 FIBPO43427 364 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 RNASEH1O60930 286 aaKnown RBP2.95□□□□□ -1.94
XRN1-206ENST00000467077 AVILO75366 819 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 FRAT2O75474 233 aaPredicted RBP2.95□□□□□ -1.94
XRN1-206ENST00000467077 PGM3O95394 542 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 IGKV5-2P06315 115 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 AKR1B1P15121 316 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 TRIM21P19474 475 aaKnown RBP2.95□□□□□ -1.94
XRN1-206ENST00000467077 GYG1P46976 350 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 NRIP1P48552 1158 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 TPD52P55327 224 aaPredicted RBP2.95□□□□□ -1.94
XRN1-206ENST00000467077 RFTN1Q14699 578 aaPredicted RBP2.95□□□□□ -1.94
XRN1-206ENST00000467077 SHHQ15465 462 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 LRRC26Q2I0M4 334 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 KRTAP5-7Q6L8G8 165 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 TEX38Q6PEX7 206 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 TMEM64Q6YI46 380 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 C15orf52Q6ZUT6 534 aaKnown RBP2.95□□□□□ -1.94
XRN1-206ENST00000467077 TMPRSS11FQ6ZWK6 438 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 KBTBD6Q86V97 674 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 CEP57Q86XR8 500 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 CFAP206Q8IYR0 622 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 LSMEM2Q8N112 164 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 FBXO39Q8N4B4 442 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 MARVELD2Q8N4S9 558 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 ANKRD13CQ8N6S4 541 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 PI4KAP1Q8N8J0 262 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 DYRK2Q92630 601 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 TEKT1Q969V4 418 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 JAKMIP2Q96AA8 810 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 CDRT15Q96T59 188 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 PUS3Q9BZE2 481 aaKnown RBP2.95□□□□□ -1.94
XRN1-206ENST00000467077 S1PR5Q9H228 398 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 PDE7BQ9NP56 450 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 TAB2Q9NYJ8 693 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 WBP11Q9Y2W2 641 aaKnown RBP2.95□□□□□ -1.94
XRN1-206ENST00000467077 NME7Q9Y5B8 376 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 SNX8Q9Y5X2 465 aa2.95□□□□□ -1.94
XRN1-206ENST00000467077 PFASO15067 1338 aa2.94□□□□□ -1.94
XRN1-206ENST00000467077 CLSPNQ9HAW4 1339 aa2.94□□□□□ -1.94
XRN1-206ENST00000467077 ZNFX1Q9P2E3 1918 aaKnown RBP2.94□□□□□ -1.94
XRN1-206ENST00000467077 TMEM129A0AVI4 362 aa2.94□□□□□ -1.94
XRN1-206ENST00000467077 ANKUB1A6NFN9 424 aa2.94□□□□□ -1.94
XRN1-206ENST00000467077 MSGN1A6NI15 193 aa2.94□□□□□ -1.94
XRN1-206ENST00000467077 CXCL11O14625 94 aa2.94□□□□□ -1.94
XRN1-206ENST00000467077 ADAMDEC1O15204 470 aa2.94□□□□□ -1.94
XRN1-206ENST00000467077 ENTPD3O75355 529 aa2.94□□□□□ -1.94
XRN1-206ENST00000467077 WDPCPO95876 746 aa2.94□□□□□ -1.94
XRN1-206ENST00000467077 GJA1P17302 382 aa2.94□□□□□ -1.94
XRN1-206ENST00000467077 CCND3P30281 292 aaPredicted RBP2.94□□□□□ -1.94
XRN1-206ENST00000467077 DRD3P35462 400 aa2.94□□□□□ -1.94
XRN1-206ENST00000467077 EIF2DP41214 584 aaKnown RBP2.94□□□□□ -1.94
XRN1-206ENST00000467077 HNRNPA3P51991 378 aaKnown RBP2.94□□□□□ -1.94
XRN1-206ENST00000467077 IFI35P80217 286 aaPredicted RBP2.94□□□□□ -1.94
XRN1-206ENST00000467077 PCLAFQ15004 111 aa2.94□□□□□ -1.94
XRN1-206ENST00000467077 CCDC57Q2TAC2 916 aa2.94□□□□□ -1.94
XRN1-206ENST00000467077 KLHL26Q53HC5 615 aa2.94□□□□□ -1.94
XRN1-206ENST00000467077 LINC00346Q8IVM7 164 aa2.94□□□□□ -1.94
XRN1-206ENST00000467077 ARHGAP24Q8N264 748 aa2.94□□□□□ -1.94
XRN1-206ENST00000467077 DCLK2Q8N568 766 aa2.94□□□□□ -1.94
XRN1-206ENST00000467077 OR5AP2Q8NGF4 316 aa2.94□□□□□ -1.94
XRN1-206ENST00000467077 SLC22A18Q96BI1 424 aa2.94□□□□□ -1.94
XRN1-206ENST00000467077 TEX12Q9BXU0 123 aa2.94□□□□□ -1.94
XRN1-206ENST00000467077 PITPNM3Q9BZ71 974 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms