RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 FAM53BQ14153 422 aa13.75□□□□□ -0.21
DNMT3A-208ENST00000466601 CPSF6Q16630 551 aaKnown RBP eCLIP13.75□□□□□ -0.21
DNMT3A-208ENST00000466601 NKAIN1Q4KMZ8 207 aa13.75□□□□□ -0.21
DNMT3A-208ENST00000466601 CFAP157Q5JU67 520 aa13.75□□□□□ -0.21
DNMT3A-208ENST00000466601 AGBL2Q5U5Z8 902 aa13.75□□□□□ -0.21
DNMT3A-208ENST00000466601 PRMT9Q6P2P2 845 aa13.75□□□□□ -0.21
DNMT3A-208ENST00000466601 VN1R5Q7Z5H4 357 aa13.75□□□□□ -0.21
DNMT3A-208ENST00000466601 VASH2Q86V25 355 aa13.75□□□□□ -0.21
DNMT3A-208ENST00000466601 DTWD1Q8N5C7 304 aa13.75□□□□□ -0.21
DNMT3A-208ENST00000466601 METTL27Q8N6F8 245 aaPredicted RBP13.75□□□□□ -0.21
DNMT3A-208ENST00000466601 OR7G3Q8NG95 312 aa13.75□□□□□ -0.21
DNMT3A-208ENST00000466601 OR4F6Q8NGB9 312 aa13.75□□□□□ -0.21
DNMT3A-208ENST00000466601 ZCCHC10Q8TBK6 192 aa13.75□□□□□ -0.21
DNMT3A-208ENST00000466601 CT55Q8WUE5 264 aa13.75□□□□□ -0.21
DNMT3A-208ENST00000466601 CCT6BQ92526 530 aa13.75□□□□□ -0.21
DNMT3A-208ENST00000466601 KIAA1143Q96AT1 154 aaPredicted RBP13.75□□□□□ -0.21
DNMT3A-208ENST00000466601 ARL8AQ96BM9 186 aa13.75□□□□□ -0.21
DNMT3A-208ENST00000466601 MVB12AQ96EY5 273 aa13.75□□□□□ -0.21
DNMT3A-208ENST00000466601 MAGEB10Q96LZ2 347 aaPredicted RBP13.75□□□□□ -0.21
DNMT3A-208ENST00000466601 SLC6A16Q9GZN6 736 aa13.75□□□□□ -0.21
DNMT3A-208ENST00000466601 DRC3Q9H069 523 aa13.75□□□□□ -0.21
DNMT3A-208ENST00000466601 GSTO2Q9H4Y5 243 aa13.75□□□□□ -0.21
DNMT3A-208ENST00000466601 PRM3Q9NNZ6 103 aa13.75□□□□□ -0.21
DNMT3A-208ENST00000466601 CDC14AQ9UNH5 594 aa13.75□□□□□ -0.21
DNMT3A-208ENST00000466601 STK38LQ9Y2H1 464 aa13.75□□□□□ -0.21
DNMT3A-208ENST00000466601 MRPS2Q9Y399 296 aaKnown RBP13.75□□□□□ -0.21
DNMT3A-208ENST00000466601 A0A0A6YYC8 382 aaPredicted RBP13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 A0A1B0GTL3 188 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 URADA6NGE7 173 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 H0YIV9 168 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 I3L1I5 382 aaPredicted RBP13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 FOXS1O43638 330 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 ZWINTO95229 277 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 ONECUT2O95948 504 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 BPGMP07738 259 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 PIM1P11309 404 aaPredicted RBP13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 LIFP15018 202 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 ITGAXP20702 1163 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 SERPINB1P30740 379 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 OR1D4P47884 311 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 STXBP1P61764 594 aaKnown RBP13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 HYAL2Q12891 473 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 LCP2Q13094 533 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 DNASE1L3Q13609 305 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 ZRSR2Q15696 482 aaKnown RBP13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 GGTA1PQ4G0N0 100 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 TOR1AIP1Q5JTV8 583 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 BROXQ5VW32 411 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 ADNP2Q6IQ32 1131 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 LETMD1Q6P1Q0 360 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 ZNF473Q8WTR7 871 aaKnown RBP13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 REPS1Q96D71 796 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 MMABQ96EY8 250 aaPredicted RBP13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 CCNL2Q96S94 520 aaPredicted RBP13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 ZNF382Q96SR6 550 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 C17orf62Q9BQA9 187 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 EFHD1Q9BUP0 239 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 MECRQ9BV79 373 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 GATA5Q9BWX5 397 aaPredicted RBP13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 GPN2Q9H9Y4 310 aaPredicted RBP13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 ANKHQ9HCJ1 492 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 ZNF304Q9HCX3 659 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 SLC22A11Q9NSA0 550 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 IFT80Q9P2H3 777 aaPredicted RBP13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 ADGRE2Q9UHX3 823 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 SSUH2Q9Y2M2 353 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 TSC22D4Q9Y3Q8 395 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 SLC22A7Q9Y694 548 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 MAU2Q9Y6X3 613 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 AHCTF1Q8WYP5 2266 aa13.74□□□□□ -0.21
DNMT3A-208ENST00000466601 CEP295Q9C0D2 2601 aa13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 URB1O60287 2271 aaKnown RBP13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 C21orf140B9A014 251 aa13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 C9J4A7 227 aa13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 TERTO14746 1132 aaKnown RBP13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 SASH3O75995 380 aa13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 OR4F21O95013 312 aa13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 CAPN1P07384 714 aa13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 RAB40ALP0C0E4 278 aa13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 ZNF888P0CJ79 500 aaPredicted RBP13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 IL1RNP18510 177 aa13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 F8A1P23610 371 aa13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 ITPKBP27987 946 aa13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 AVPR1BP47901 424 aa13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 PKNOX1P55347 436 aa13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 RPS15P62841 145 aaKnown RBP13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 TLE3Q04726 772 aa13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 DDX39BQ13838 428 aaKnown RBP13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 MPP2Q14168 576 aa13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 SLC9A5Q14940 896 aa13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 HERC3Q15034 1050 aa13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 ARHGAP40Q5TG30 622 aa13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 MLIPQ5VWP3 458 aa13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 TTC19Q6DKK2 380 aaPredicted RBP13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 FAM198BQ6UWH4 519 aa13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 FRMD7Q6ZUT3 714 aa13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 GPRIN3Q6ZVF9 776 aa13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 ABHD13Q7L211 337 aa13.73□□□□□ -0.21
DNMT3A-208ENST00000466601 PRSS41Q7RTY9 318 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms