RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 RCN1Q15293 331 aa16.21■□□□□ 0.19
EXOSC3-203ENST00000465229 ZIC1Q15915 447 aa16.21■□□□□ 0.19
EXOSC3-203ENST00000465229 GSTA3Q16772 222 aa16.21■□□□□ 0.19
EXOSC3-203ENST00000465229 CCDC157Q569K6 752 aa16.21■□□□□ 0.19
EXOSC3-203ENST00000465229 XKR7Q5GH72 579 aa16.21■□□□□ 0.19
EXOSC3-203ENST00000465229 LIPJQ5W064 366 aa16.21■□□□□ 0.19
EXOSC3-203ENST00000465229 FAM219BQ5XKK7 198 aa16.21■□□□□ 0.19
EXOSC3-203ENST00000465229 FCRL6Q6DN72 434 aa16.21■□□□□ 0.19
EXOSC3-203ENST00000465229 HACD2Q6Y1H2 254 aa16.21■□□□□ 0.19
EXOSC3-203ENST00000465229 OR4D9Q8NGE8 314 aa16.21■□□□□ 0.19
EXOSC3-203ENST00000465229 DPYSL5Q9BPU6 564 aa16.21■□□□□ 0.19
EXOSC3-203ENST00000465229 SPNS1Q9H2V7 528 aa16.21■□□□□ 0.19
EXOSC3-203ENST00000465229 PELI2Q9HAT8 420 aa16.21■□□□□ 0.19
EXOSC3-203ENST00000465229 TMEM45AQ9NWC5 275 aa16.21■□□□□ 0.19
EXOSC3-203ENST00000465229 GEMIN8Q9NWZ8 242 aaKnown RBP16.21■□□□□ 0.19
EXOSC3-203ENST00000465229 SEMA5BQ9P283 1151 aa16.21■□□□□ 0.19
EXOSC3-203ENST00000465229 C15orf41Q9Y2V0 281 aa16.21■□□□□ 0.19
EXOSC3-203ENST00000465229 PCDHGA1Q9Y5H4 931 aa16.21■□□□□ 0.19
EXOSC3-203ENST00000465229 KNTC1P50748 2209 aa16.21■□□□□ 0.19
EXOSC3-203ENST00000465229 SLC30A4O14863 429 aa16.2■□□□□ 0.18
EXOSC3-203ENST00000465229 UGDHO60701 494 aa16.2■□□□□ 0.18
EXOSC3-203ENST00000465229 RFPL3O75679 317 aa16.2■□□□□ 0.18
EXOSC3-203ENST00000465229 KRT36O76013 467 aa16.2■□□□□ 0.18
EXOSC3-203ENST00000465229 OR4F21O95013 312 aa16.2■□□□□ 0.18
EXOSC3-203ENST00000465229 SNRPB2P08579 225 aaKnown RBP16.2■□□□□ 0.18
EXOSC3-203ENST00000465229 CD1EP15812 388 aa16.2■□□□□ 0.18
EXOSC3-203ENST00000465229 E2F1Q01094 437 aa16.2■□□□□ 0.18
EXOSC3-203ENST00000465229 MEF2AQ02078 507 aaPredicted RBP16.2■□□□□ 0.18
EXOSC3-203ENST00000465229 SLC34A1Q06495 639 aa16.2■□□□□ 0.18
EXOSC3-203ENST00000465229 SPIDRQ14159 915 aa16.2■□□□□ 0.18
EXOSC3-203ENST00000465229 SNAP47Q5SQN1 464 aa16.2■□□□□ 0.18
EXOSC3-203ENST00000465229 CACHD1Q5VU97 1274 aa16.2■□□□□ 0.18
EXOSC3-203ENST00000465229 BNC2Q6ZN30 1099 aaPredicted RBP16.2■□□□□ 0.18
EXOSC3-203ENST00000465229 RNF165Q6ZSG1 346 aa16.2■□□□□ 0.18
EXOSC3-203ENST00000465229 ADCK2Q7Z695 626 aa16.2■□□□□ 0.18
EXOSC3-203ENST00000465229 PAQR7Q86WK9 346 aa16.2■□□□□ 0.18
EXOSC3-203ENST00000465229 DDIASQ8IXT1 998 aa16.2■□□□□ 0.18
EXOSC3-203ENST00000465229 ZNF740Q8NDX6 193 aa16.2■□□□□ 0.18
EXOSC3-203ENST00000465229 WDR48Q8TAF3 677 aa16.2■□□□□ 0.18
EXOSC3-203ENST00000465229 KCNA7Q96RP8 456 aa16.2■□□□□ 0.18
EXOSC3-203ENST00000465229 POMPQ9Y244 141 aa16.2■□□□□ 0.18
EXOSC3-203ENST00000465229 KCNE1BA0A087WTH5 132 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 IGHV5-10-1A0A0J9YXX1 117 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 ATP6AP2A0A1C7CYW4 349 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 OR2A25A4D2G3 310 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 BBIP1A8MTZ0 92 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 D6RAR5 112 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 ATP6AP2O75787 350 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 ALDOCP09972 364 aaKnown RBP16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 IDO1P14902 403 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 GPX3P22352 226 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 AP2B1P63010 937 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 SLBPQ14493 270 aaKnown RBP eCLIP16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 CPSF6Q16630 551 aaKnown RBP eCLIP16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 AGKQ53H12 422 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 GRHL2Q6ISB3 625 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 FBXO42Q6P3S6 717 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 SLCO6A1Q86UG4 719 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 CARFQ8N187 725 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 CDYL2Q8N8U2 506 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 TSPEARQ8WU66 669 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 EFCAB11Q9BUY7 163 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 WDR41Q9HAD4 459 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 RIC8BQ9NVN3 520 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 ZNF490Q9ULM2 529 aaPredicted RBP16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 A8MU76 341 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 H0Y3Z8 333 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 TOX3O15405 576 aaPredicted RBP16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 CTSVO60911 334 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 JUPP14923 745 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 HNF4AP41235 474 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 GGTA1PQ4G0N0 100 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 PIGGQ5H8A4 983 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 GK5Q6ZS86 529 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 PRSS42Q7Z5A4 293 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 ARHGAP22Q7Z5H3 698 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 PLD3Q8IV08 490 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 SLITRK4Q8IW52 837 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 MIER2Q8N344 545 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 C19orf47Q8N9M1 422 aaKnown RBP16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 METTL6Q8TCB7 284 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 TUBGCP3Q96CW5 907 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 AIF1LQ9BQI0 150 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 FAM60AQ9NP50 221 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 SDR39U1Q9NRG7 319 aaPredicted RBP16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 ANKMY1Q9P2S6 941 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 BCAP29Q9UHQ4 241 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 ANGPTL2Q9UKU9 493 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 TIMM22Q9Y584 194 aa16.19■□□□□ 0.18
EXOSC3-203ENST00000465229 SPAARA0A1B0GVQ0 90 aa16.18■□□□□ 0.18
EXOSC3-203ENST00000465229 FEZF1A0PJY2 475 aa16.18■□□□□ 0.18
EXOSC3-203ENST00000465229 HAT1O14929 419 aa16.18■□□□□ 0.18
EXOSC3-203ENST00000465229 LCMT2O60294 686 aaKnown RBP16.18■□□□□ 0.18
EXOSC3-203ENST00000465229 DKK1O94907 266 aa16.18■□□□□ 0.18
EXOSC3-203ENST00000465229 ZBTB11O95625 1053 aaPredicted RBP16.18■□□□□ 0.18
EXOSC3-203ENST00000465229 CAPN1P07384 714 aa16.18■□□□□ 0.18
EXOSC3-203ENST00000465229 LINC00032P0C843 101 aa16.18■□□□□ 0.18
EXOSC3-203ENST00000465229 HGFP14210 728 aa16.18■□□□□ 0.18
EXOSC3-203ENST00000465229 CXCR2P25025 360 aa16.18■□□□□ 0.18
EXOSC3-203ENST00000465229 PTDSS1P48651 473 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms