RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 TEFQ10587 303 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 PPA1Q15181 289 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 FCN2Q15485 313 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 ZNF542PQ5EBM4 170 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 ZC2HC1BQ5TFG8 222 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 ZNF770Q6IQ21 691 aaPredicted RBP3.6□□□□□ -1.83
CLK1-208ENST00000464454 KLHL10Q6JEL2 608 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 TMEM270Q6UE05 265 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 LEKR1Q6ZMV7 388 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 RAPH1Q70E73 1250 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 CCDC83Q8IWF9 413 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 KLHDC8AQ8IYD2 350 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 RAB42Q8N4Z0 105 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 PRAC1Q96KF2 57 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 MRPL9Q9BYD2 267 aaKnown RBP3.6□□□□□ -1.83
CLK1-208ENST00000464454 NYXQ9GZU5 481 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 SLC5A7Q9GZV3 580 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 CUEDC2Q9H467 287 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 GPR173Q9NS66 373 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 ZDHHC18Q9NUE0 388 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 EXOC1Q9NV70 894 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 PANK4Q9NVE7 773 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 TRPC4Q9UBN4 977 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 FBXL4Q9UKA2 621 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 STX8Q9UNK0 236 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 WDR37Q9Y2I8 494 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 NSG2Q9Y328 171 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 PCDHGA1Q9Y5H4 931 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 SELENOKQ9Y6D0 94 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 NPHP3Q7Z494 1330 aa3.6□□□□□ -1.83
CLK1-208ENST00000464454 TRBV4-1A0A0J9YWV2 114 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 A0A1W2PRV1 198 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 FAM149AA5PLN7 773 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 ANTXRLA6NF34 631 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 A8MVM7 634 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 H3BMM5 538 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 NTN3O00634 580 aaPredicted RBP3.59□□□□□ -1.83
CLK1-208ENST00000464454 ARHGEF9O43307 516 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 ACSL4O60488 711 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 RTN2O75298 545 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 VCLP18206 1134 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 SERPINB6P35237 376 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 CASP3P42574 277 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 LEPRP48357 1165 aaKnown RBP3.59□□□□□ -1.83
CLK1-208ENST00000464454 DCDC1P59894 354 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 SLC34A1Q06495 639 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 C17orf67Q0P5P2 114 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 HNRNPDQ14103 355 aaKnown RBP3.59□□□□□ -1.83
CLK1-208ENST00000464454 C2orf76Q3KRA6 126 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 ARMCX4Q5H9R4 360 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 SLC10A5Q5PT55 438 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 PM20D1Q6GTS8 502 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 MACC1Q6ZN28 852 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 BTN2A1Q7KYR7 527 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 COX8CQ7Z4L0 72 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 PTAR1Q7Z6K3 402 aaPredicted RBP3.59□□□□□ -1.83
CLK1-208ENST00000464454 HOGA1Q86XE5 327 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 AQP12AQ8IXF9 295 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 CARNMT1Q8N4J0 409 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 SPC24Q8NBT2 197 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 PSMA8Q8TAA3 256 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 GATAD1Q8WUU5 269 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 ZNRF4Q8WWF5 429 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 NXPE2Q96DL1 559 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 RASL10BQ96S79 203 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 PRMT1Q99873 361 aaKnown RBP3.59□□□□□ -1.83
CLK1-208ENST00000464454 OPRPNQ99935 248 aaPredicted RBP3.59□□□□□ -1.83
CLK1-208ENST00000464454 PIGQQ9BRB3 760 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 PI4K2AQ9BTU6 479 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 CACNG6Q9BXT2 260 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 C5orf66Q9H5L9 145 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 AKIRIN1Q9H9L7 192 aaPredicted RBP3.59□□□□□ -1.83
CLK1-208ENST00000464454 RNPEPL1Q9HAU8 725 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 RNF186Q9NXI6 227 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 BARHL2Q9NY43 387 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 TMOD3Q9NYL9 352 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 SPG21Q9NZD8 308 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 HACD3Q9P035 362 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 PILRBQ9UKJ0 227 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 NCKAP1Q9Y2A7 1128 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 SNX5Q9Y5X3 404 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 COLEC10Q9Y6Z7 277 aa3.59□□□□□ -1.83
CLK1-208ENST00000464454 SPATA31D1Q6ZQQ2 1576 aa3.59□□□□□ -1.84
CLK1-208ENST00000464454 MTMR11A4FU01 709 aa3.58□□□□□ -1.84
CLK1-208ENST00000464454 ANKDD1BA6NHY2 528 aa3.58□□□□□ -1.84
CLK1-208ENST00000464454 PGRMC2O15173 223 aa3.58□□□□□ -1.84
CLK1-208ENST00000464454 KIF5CO60282 957 aa3.58□□□□□ -1.84
CLK1-208ENST00000464454 CYTIPO60759 359 aa3.58□□□□□ -1.84
CLK1-208ENST00000464454 GRAP2O75791 330 aa3.58□□□□□ -1.84
CLK1-208ENST00000464454 GOT1P17174 413 aa3.58□□□□□ -1.84
CLK1-208ENST00000464454 TYMPP19971 482 aa3.58□□□□□ -1.84
CLK1-208ENST00000464454 AADACP22760 399 aa3.58□□□□□ -1.84
CLK1-208ENST00000464454 HNF4AP41235 474 aa3.58□□□□□ -1.84
CLK1-208ENST00000464454 MAGEB1P43366 347 aa3.58□□□□□ -1.84
CLK1-208ENST00000464454 OR3A2P47893 321 aa3.58□□□□□ -1.84
CLK1-208ENST00000464454 PAX9P55771 341 aa3.58□□□□□ -1.84
CLK1-208ENST00000464454 NME5P56597 212 aa3.58□□□□□ -1.84
CLK1-208ENST00000464454 KIAA1024LP59773 190 aa3.58□□□□□ -1.84
CLK1-208ENST00000464454 RPP38P78345 283 aaKnown RBP3.58□□□□□ -1.84
CLK1-208ENST00000464454 SRSF9Q13242 221 aaKnown RBP eCLIP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms