RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 EFCAB8A8MWE9 144 aa17.78■□□□□ 0.44
SF3A1-205ENST00000463818 CDC7O00311 574 aa17.78■□□□□ 0.44
SF3A1-205ENST00000463818 NDUFS4O43181 175 aa17.78■□□□□ 0.44
SF3A1-205ENST00000463818 LRRTM2O43300 516 aa17.78■□□□□ 0.44
SF3A1-205ENST00000463818 DNAJB6O75190 326 aa17.78■□□□□ 0.44
SF3A1-205ENST00000463818 COL8A1P27658 744 aa17.78■□□□□ 0.44
SF3A1-205ENST00000463818 ZNF33BQ06732 778 aa17.78■□□□□ 0.44
SF3A1-205ENST00000463818 FASTKD3Q14CZ7 662 aaKnown RBP17.78■□□□□ 0.44
SF3A1-205ENST00000463818 BTBD16Q32M84 506 aa17.78■□□□□ 0.44
SF3A1-205ENST00000463818 ZNF324BQ6AW86 544 aaPredicted RBP17.78■□□□□ 0.44
SF3A1-205ENST00000463818 PLAG1Q6DJT9 500 aa17.78■□□□□ 0.44
SF3A1-205ENST00000463818 SBSNQ6UWP8 590 aa17.78■□□□□ 0.44
SF3A1-205ENST00000463818 STRA8Q7Z7C7 330 aa17.78■□□□□ 0.44
SF3A1-205ENST00000463818 THOC6Q86W42 341 aaKnown RBP17.78■□□□□ 0.44
SF3A1-205ENST00000463818 ZC3HC1Q86WB0 502 aaKnown RBP17.78■□□□□ 0.44
SF3A1-205ENST00000463818 NKAPQ8N5F7 415 aaKnown RBP17.78■□□□□ 0.44
SF3A1-205ENST00000463818 OR5T3Q8NGG3 340 aa17.78■□□□□ 0.44
SF3A1-205ENST00000463818 NEIL2Q969S2 332 aa17.78■□□□□ 0.44
SF3A1-205ENST00000463818 KRT12Q99456 494 aa17.78■□□□□ 0.44
SF3A1-205ENST00000463818 RNF32Q9H0A6 362 aa17.78■□□□□ 0.44
SF3A1-205ENST00000463818 SNX24Q9Y343 169 aa17.78■□□□□ 0.44
SF3A1-205ENST00000463818 FAM95CA0A1B0GW59 222 aa17.77■□□□□ 0.44
SF3A1-205ENST00000463818 GALR3O60755 368 aaPredicted RBP17.77■□□□□ 0.44
SF3A1-205ENST00000463818 ZNF37AP17032 561 aaPredicted RBP17.77■□□□□ 0.44
SF3A1-205ENST00000463818 ALOX12P18054 663 aa17.77■□□□□ 0.44
SF3A1-205ENST00000463818 IL10P22301 178 aa17.77■□□□□ 0.44
SF3A1-205ENST00000463818 SCTRP47872 440 aa17.77■□□□□ 0.44
SF3A1-205ENST00000463818 AGTR2P50052 363 aa17.77■□□□□ 0.44
SF3A1-205ENST00000463818 TAS2R39P59534 338 aa17.77■□□□□ 0.44
SF3A1-205ENST00000463818 RHAGQ02094 409 aa17.77■□□□□ 0.44
SF3A1-205ENST00000463818 ACTN3Q08043 901 aaPredicted RBP17.77■□□□□ 0.44
SF3A1-205ENST00000463818 NSDHLQ15738 373 aa17.77■□□□□ 0.44
SF3A1-205ENST00000463818 DEFB134Q4QY38 66 aa17.77■□□□□ 0.44
SF3A1-205ENST00000463818 SUN3Q8TAQ9 357 aa17.77■□□□□ 0.44
SF3A1-205ENST00000463818 TSNARE1Q96NA8 513 aa17.77■□□□□ 0.44
SF3A1-205ENST00000463818 OR1F2PQ96R84 312 aa17.77■□□□□ 0.44
SF3A1-205ENST00000463818 RBCK1Q9BYM8 510 aa17.77■□□□□ 0.44
SF3A1-205ENST00000463818 SPNS1Q9H2V7 528 aa17.77■□□□□ 0.44
SF3A1-205ENST00000463818 LANCL2Q9NS86 450 aa17.77■□□□□ 0.44
SF3A1-205ENST00000463818 RNF14Q9UBS8 474 aa17.77■□□□□ 0.44
SF3A1-205ENST00000463818 TEKT2Q9UIF3 430 aa17.77■□□□□ 0.44
SF3A1-205ENST00000463818 ZFP69BQ9UJL9 534 aa17.77■□□□□ 0.44
SF3A1-205ENST00000463818 DYRK1BQ9Y463 629 aa17.77■□□□□ 0.44
SF3A1-205ENST00000463818 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.77■□□□□ 0.44
SF3A1-205ENST00000463818 NOTCH2Q04721 2471 aa17.76■□□□□ 0.43
SF3A1-205ENST00000463818 OR5H15A6NDH6 313 aa17.76■□□□□ 0.43
SF3A1-205ENST00000463818 E7ESA3 106 aa17.76■□□□□ 0.43
SF3A1-205ENST00000463818 CHST10O43529 356 aa17.76■□□□□ 0.43
SF3A1-205ENST00000463818 CDC123O75794 336 aaPredicted RBP17.76■□□□□ 0.43
SF3A1-205ENST00000463818 B3GALT4O96024 378 aa17.76■□□□□ 0.43
SF3A1-205ENST00000463818 MYBL2P10244 700 aa17.76■□□□□ 0.43
SF3A1-205ENST00000463818 RPL21P46778 160 aaKnown RBP17.76■□□□□ 0.43
SF3A1-205ENST00000463818 MRPS25P82663 173 aaKnown RBP17.76■□□□□ 0.43
SF3A1-205ENST00000463818 RGS1Q08116 209 aa17.76■□□□□ 0.43
SF3A1-205ENST00000463818 ZNF460Q14592 562 aa17.76■□□□□ 0.43
SF3A1-205ENST00000463818 ABRAXAS2Q15018 415 aa17.76■□□□□ 0.43
SF3A1-205ENST00000463818 PPP1R3AQ16821 1122 aa17.76■□□□□ 0.43
SF3A1-205ENST00000463818 SFT2D3Q587I9 215 aa17.76■□□□□ 0.43
SF3A1-205ENST00000463818 H3F3CQ6NXT2 135 aa17.76■□□□□ 0.43
SF3A1-205ENST00000463818 NXPE4Q6UWF7 544 aa17.76■□□□□ 0.43
SF3A1-205ENST00000463818 M1APQ8TC57 530 aa17.76■□□□□ 0.43
SF3A1-205ENST00000463818 NT5CQ8TCD5 201 aa17.76■□□□□ 0.43
SF3A1-205ENST00000463818 ANKRD7Q92527 254 aa17.76■□□□□ 0.43
SF3A1-205ENST00000463818 ZNF354BQ96LW1 612 aa17.76■□□□□ 0.43
SF3A1-205ENST00000463818 PELI2Q9HAT8 420 aa17.76■□□□□ 0.43
SF3A1-205ENST00000463818 KCNK13Q9HB14 408 aa17.76■□□□□ 0.43
SF3A1-205ENST00000463818 SLC22A14Q9Y267 594 aa17.76■□□□□ 0.43
SF3A1-205ENST00000463818 DOPEY1Q5JWR5 2465 aa17.75■□□□□ 0.43
SF3A1-205ENST00000463818 NPEPPSL1A6NEC2 478 aa17.75■□□□□ 0.43
SF3A1-205ENST00000463818 PRAMEF2O60811 474 aa17.75■□□□□ 0.43
SF3A1-205ENST00000463818 ZNF888P0CJ79 500 aaPredicted RBP17.75■□□□□ 0.43
SF3A1-205ENST00000463818 AHRP35869 848 aa17.75■□□□□ 0.43
SF3A1-205ENST00000463818 OLR1P78380 273 aa17.75■□□□□ 0.43
SF3A1-205ENST00000463818 CBLBQ13191 982 aa17.75■□□□□ 0.43
SF3A1-205ENST00000463818 RBBP5Q15291 538 aaKnown RBP17.75■□□□□ 0.43
SF3A1-205ENST00000463818 INAQ16352 499 aa17.75■□□□□ 0.43
SF3A1-205ENST00000463818 EXT1Q16394 746 aa17.75■□□□□ 0.43
SF3A1-205ENST00000463818 ACER2Q5QJU3 275 aa17.75■□□□□ 0.43
SF3A1-205ENST00000463818 FCRLBQ6BAA4 426 aa17.75■□□□□ 0.43
SF3A1-205ENST00000463818 PAPD4Q6PIY7 484 aaKnown RBP17.75■□□□□ 0.43
SF3A1-205ENST00000463818 ZBED8Q8IZ13 594 aa17.75■□□□□ 0.43
SF3A1-205ENST00000463818 ANKRD53Q8N9V6 530 aa17.75■□□□□ 0.43
SF3A1-205ENST00000463818 UTP15Q8TED0 518 aaKnown RBP17.75■□□□□ 0.43
SF3A1-205ENST00000463818 ANKRD49Q8WVL7 239 aa17.75■□□□□ 0.43
SF3A1-205ENST00000463818 NR4A3Q92570 626 aa17.75■□□□□ 0.43
SF3A1-205ENST00000463818 TSLPQ969D9 159 aa17.75■□□□□ 0.43
SF3A1-205ENST00000463818 TBC1D20Q96BZ9 403 aa17.75■□□□□ 0.43
SF3A1-205ENST00000463818 EGFL8Q99944 293 aa17.75■□□□□ 0.43
SF3A1-205ENST00000463818 AIF1LQ9BQI0 150 aa17.75■□□□□ 0.43
SF3A1-205ENST00000463818 KCNE2Q9Y6J6 123 aa17.75■□□□□ 0.43
SF3A1-205ENST00000463818 SCN3AQ9NY46 2000 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 CTAGE15A4D2H0 777 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 MAGEB17A8MXT2 336 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 PIAS1O75925 651 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 RASAL1O95294 804 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 FHP07954 510 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 STSP08842 583 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 HNF4AP41235 474 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 TDGF1P3P51864 188 aa17.74■□□□□ 0.43
SF3A1-205ENST00000463818 KCNK10P57789 538 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms