RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 CMPK2Q5EBM0 449 aa13.56□□□□□ -0.24
SMC1A-204ENST00000463684 REXO1L1PQ8IX06 675 aa13.56□□□□□ -0.24
SMC1A-204ENST00000463684 CYP4X1Q8N118 509 aa13.56□□□□□ -0.24
SMC1A-204ENST00000463684 FBXO15Q8NCQ5 510 aaPredicted RBP13.56□□□□□ -0.24
SMC1A-204ENST00000463684 OR5M3Q8NGP4 307 aa13.56□□□□□ -0.24
SMC1A-204ENST00000463684 OR10Q1Q8NGQ4 319 aa13.56□□□□□ -0.24
SMC1A-204ENST00000463684 LPGAT1Q92604 370 aa13.56□□□□□ -0.24
SMC1A-204ENST00000463684 SEC16BQ96JE7 1060 aa13.56□□□□□ -0.24
SMC1A-204ENST00000463684 TCF12Q99081 682 aa13.56□□□□□ -0.24
SMC1A-204ENST00000463684 FAM129AQ9BZQ8 928 aa13.56□□□□□ -0.24
SMC1A-204ENST00000463684 LANCL2Q9NS86 450 aa13.56□□□□□ -0.24
SMC1A-204ENST00000463684 TREX1Q9NSU2 369 aa13.56□□□□□ -0.24
SMC1A-204ENST00000463684 GALPQ9UBC7 116 aa13.56□□□□□ -0.24
SMC1A-204ENST00000463684 ST6GALNAC2Q9UJ37 374 aa13.56□□□□□ -0.24
SMC1A-204ENST00000463684 AMFRQ9UKV5 643 aa13.56□□□□□ -0.24
SMC1A-204ENST00000463684 CRYL1Q9Y2S2 319 aa13.56□□□□□ -0.24
SMC1A-204ENST00000463684 NAALAD2Q9Y3Q0 740 aa13.56□□□□□ -0.24
SMC1A-204ENST00000463684 AP3B1O00203 1094 aa13.55□□□□□ -0.24
SMC1A-204ENST00000463684 ZBTB14O43829 449 aa13.55□□□□□ -0.24
SMC1A-204ENST00000463684 VAPBO95292 243 aa13.55□□□□□ -0.24
SMC1A-204ENST00000463684 FHP07954 510 aa13.55□□□□□ -0.24
SMC1A-204ENST00000463684 JAK1P23458 1154 aa13.55□□□□□ -0.24
SMC1A-204ENST00000463684 DNASE1P24855 282 aa13.55□□□□□ -0.24
SMC1A-204ENST00000463684 NMBRP28336 390 aa13.55□□□□□ -0.24
SMC1A-204ENST00000463684 ADARP55265 1226 aaKnown RBP13.55□□□□□ -0.24
SMC1A-204ENST00000463684 NUP107P57740 925 aa13.55□□□□□ -0.24
SMC1A-204ENST00000463684 CRADDP78560 199 aa13.55□□□□□ -0.24
SMC1A-204ENST00000463684 MEF2AQ02078 507 aaPredicted RBP13.55□□□□□ -0.24
SMC1A-204ENST00000463684 FOXD4Q12950 439 aaPredicted RBP13.55□□□□□ -0.24
SMC1A-204ENST00000463684 TBX2Q13207 712 aaPredicted RBP13.55□□□□□ -0.24
SMC1A-204ENST00000463684 KCNJ11Q14654 390 aa13.55□□□□□ -0.24
SMC1A-204ENST00000463684 TTLL9Q3SXZ7 439 aa13.55□□□□□ -0.24
SMC1A-204ENST00000463684 PEX26Q7Z412 305 aa13.55□□□□□ -0.24
SMC1A-204ENST00000463684 ASPGQ86U10 573 aa13.55□□□□□ -0.24
SMC1A-204ENST00000463684 PDSS2Q86YH6 399 aa13.55□□□□□ -0.24
SMC1A-204ENST00000463684 RPRMLQ8N4K4 120 aa13.55□□□□□ -0.24
SMC1A-204ENST00000463684 KCT2Q8NC54 265 aa13.55□□□□□ -0.24
SMC1A-204ENST00000463684 SLC13A3Q8WWT9 602 aa13.55□□□□□ -0.24
SMC1A-204ENST00000463684 ATG4AQ8WYN0 398 aa13.55□□□□□ -0.24
SMC1A-204ENST00000463684 TBC1D20Q96BZ9 403 aa13.55□□□□□ -0.24
SMC1A-204ENST00000463684 TM4SF19Q96DZ7 209 aa13.55□□□□□ -0.24
SMC1A-204ENST00000463684 DEFB126Q9BYW3 111 aa13.55□□□□□ -0.24
SMC1A-204ENST00000463684 SLC6A16Q9GZN6 736 aa13.55□□□□□ -0.24
SMC1A-204ENST00000463684 IL22Q9GZX6 179 aa13.55□□□□□ -0.24
SMC1A-204ENST00000463684 BFARQ9NZS9 450 aa13.55□□□□□ -0.24
SMC1A-204ENST00000463684 ZNF148Q9UQR1 794 aa13.55□□□□□ -0.24
SMC1A-204ENST00000463684 DRG1Q9Y295 367 aaKnown RBP13.55□□□□□ -0.24
SMC1A-204ENST00000463684 SLC22A7Q9Y694 548 aa13.55□□□□□ -0.24
SMC1A-204ENST00000463684 NAV3Q8IVL0 2385 aa13.55□□□□□ -0.24
SMC1A-204ENST00000463684 SCN2AQ99250 2005 aa13.54□□□□□ -0.24
SMC1A-204ENST00000463684 TCRBV7S2A1N4TA0A589 114 aa13.54□□□□□ -0.24
SMC1A-204ENST00000463684 FEZF1A0PJY2 475 aa13.54□□□□□ -0.24
SMC1A-204ENST00000463684 ZNF860A6NHJ4 632 aa13.54□□□□□ -0.24
SMC1A-204ENST00000463684 MIF4GDA9UHW6 222 aaKnown RBP13.54□□□□□ -0.24
SMC1A-204ENST00000463684 CTAG2O75638 210 aa13.54□□□□□ -0.24
SMC1A-204ENST00000463684 IPO7O95373 1038 aaKnown RBP13.54□□□□□ -0.24
SMC1A-204ENST00000463684 SLC35G6P0C7Q6 338 aa13.54□□□□□ -0.24
SMC1A-204ENST00000463684 GRK3P35626 688 aa13.54□□□□□ -0.24
SMC1A-204ENST00000463684 NPY2RP49146 381 aa13.54□□□□□ -0.24
SMC1A-204ENST00000463684 SKP1P63208 163 aa13.54□□□□□ -0.24
SMC1A-204ENST00000463684 HERC3Q15034 1050 aa13.54□□□□□ -0.24
SMC1A-204ENST00000463684 TYSND1Q2T9J0 566 aa13.54□□□□□ -0.24
SMC1A-204ENST00000463684 CAPN13Q6MZZ7 669 aaPredicted RBP13.54□□□□□ -0.24
SMC1A-204ENST00000463684 SLC26A11Q86WA9 606 aa13.54□□□□□ -0.24
SMC1A-204ENST00000463684 LRRC56Q8IYG6 542 aaPredicted RBP13.54□□□□□ -0.24
SMC1A-204ENST00000463684 TMEM156Q8N614 296 aa13.54□□□□□ -0.24
SMC1A-204ENST00000463684 ZFP62Q8NB50 900 aaPredicted RBP13.54□□□□□ -0.24
SMC1A-204ENST00000463684 OR52N2Q8NGI0 321 aa13.54□□□□□ -0.24
SMC1A-204ENST00000463684 ASB11Q8WXH4 323 aa13.54□□□□□ -0.24
SMC1A-204ENST00000463684 RMND5BQ96G75 393 aaPredicted RBP13.54□□□□□ -0.24
SMC1A-204ENST00000463684 CCDC138Q96M89 665 aa13.54□□□□□ -0.24
SMC1A-204ENST00000463684 PTCHD1Q96NR3 888 aa13.54□□□□□ -0.24
SMC1A-204ENST00000463684 PCBD2Q9H0N5 130 aa13.54□□□□□ -0.24
SMC1A-204ENST00000463684 DEFB127Q9H1M4 99 aa13.54□□□□□ -0.24
SMC1A-204ENST00000463684 CCDC177Q9NQR7 707 aaPredicted RBP13.54□□□□□ -0.24
SMC1A-204ENST00000463684 PLSCR2Q9NRY7 297 aa13.54□□□□□ -0.24
SMC1A-204ENST00000463684 PAK5Q9P286 719 aa13.54□□□□□ -0.24
SMC1A-204ENST00000463684 GTF3C1Q12789 2109 aa13.54□□□□□ -0.24
SMC1A-204ENST00000463684 SPG11Q96JI7 2443 aa13.53□□□□□ -0.24
SMC1A-204ENST00000463684 ANKHD1Q8IWZ3 2542 aaKnown RBP13.53□□□□□ -0.24
SMC1A-204ENST00000463684 GRID2IPA4D2P6 1211 aa13.53□□□□□ -0.24
SMC1A-204ENST00000463684 BTNL10A8MVZ5 291 aa13.53□□□□□ -0.24
SMC1A-204ENST00000463684 GOLGA8KD6RF30 607 aa13.53□□□□□ -0.24
SMC1A-204ENST00000463684 NPIPA2E9PIF3 369 aa13.53□□□□□ -0.24
SMC1A-204ENST00000463684 NPIPA3F8WFD2 350 aa13.53□□□□□ -0.24
SMC1A-204ENST00000463684 GOLGA8TH3BQL2 631 aa13.53□□□□□ -0.24
SMC1A-204ENST00000463684 LIASO43766 372 aa13.53□□□□□ -0.24
SMC1A-204ENST00000463684 B4GALT2O60909 372 aa13.53□□□□□ -0.24
SMC1A-204ENST00000463684 DGKQP52824 942 aa13.53□□□□□ -0.24
SMC1A-204ENST00000463684 GPR85P60893 370 aa13.53□□□□□ -0.24
SMC1A-204ENST00000463684 GXYLT1Q4G148 440 aa13.53□□□□□ -0.24
SMC1A-204ENST00000463684 EMC4Q5J8M3 183 aa13.53□□□□□ -0.24
SMC1A-204ENST00000463684 CYP4Z2PQ8N1L4 340 aa13.53□□□□□ -0.24
SMC1A-204ENST00000463684 CCDC89Q8N998 374 aa13.53□□□□□ -0.24
SMC1A-204ENST00000463684 LRRC57Q8N9N7 239 aa13.53□□□□□ -0.24
SMC1A-204ENST00000463684 TC2NQ8N9U0 490 aa13.53□□□□□ -0.24
SMC1A-204ENST00000463684 OR5T3Q8NGG3 340 aa13.53□□□□□ -0.24
SMC1A-204ENST00000463684 GOT1L1Q8NHS2 421 aaPredicted RBP13.53□□□□□ -0.24
SMC1A-204ENST00000463684 FRMD8P1Q9BZ68 369 aaPredicted RBP13.53□□□□□ -0.24
SMC1A-204ENST00000463684 LIME1Q9H400 295 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms