RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 AGAP14A8MT82 685 aa12.33□□□□□ -0.44
C9orf3-211ENST00000463372 MAGEB17A8MXT2 336 aa12.33□□□□□ -0.44
C9orf3-211ENST00000463372 PES1O00541 588 aaKnown RBP12.33□□□□□ -0.44
C9orf3-211ENST00000463372 PHF2O75151 1096 aa12.33□□□□□ -0.44
C9orf3-211ENST00000463372 TCF4P15884 667 aa12.33□□□□□ -0.44
C9orf3-211ENST00000463372 ITGALP20701 1170 aa12.33□□□□□ -0.44
C9orf3-211ENST00000463372 CNR1P21554 472 aa12.33□□□□□ -0.44
C9orf3-211ENST00000463372 VLDLRP98155 873 aa12.33□□□□□ -0.44
C9orf3-211ENST00000463372 DNAJC21Q5F1R6 531 aaKnown RBP12.33□□□□□ -0.44
C9orf3-211ENST00000463372 FAM120AOSQ5T036 256 aa12.33□□□□□ -0.44
C9orf3-211ENST00000463372 NSUN5P2Q63ZY6 315 aa12.33□□□□□ -0.44
C9orf3-211ENST00000463372 PCGF5Q86SE9 256 aa12.33□□□□□ -0.44
C9orf3-211ENST00000463372 GPALPP1Q8IXQ4 340 aa12.33□□□□□ -0.44
C9orf3-211ENST00000463372 TSLPQ969D9 159 aa12.33□□□□□ -0.44
C9orf3-211ENST00000463372 ZNF830Q96NB3 372 aaPredicted RBP12.33□□□□□ -0.44
C9orf3-211ENST00000463372 FAM96AQ9H5X1 160 aa12.33□□□□□ -0.44
C9orf3-211ENST00000463372 SH2D2AQ9NP31 389 aa12.33□□□□□ -0.44
C9orf3-211ENST00000463372 FBXW2Q9UKT8 454 aa12.33□□□□□ -0.44
C9orf3-211ENST00000463372 LAMP3Q9UQV4 416 aa12.33□□□□□ -0.44
C9orf3-211ENST00000463372 A0A0U1RQJ8 604 aa12.32□□□□□ -0.44
C9orf3-211ENST00000463372 OR2A25A4D2G3 310 aa12.32□□□□□ -0.44
C9orf3-211ENST00000463372 CDC123O75794 336 aaPredicted RBP12.32□□□□□ -0.44
C9orf3-211ENST00000463372 TMIGD3P0DMS9 266 aaPredicted RBP12.32□□□□□ -0.44
C9orf3-211ENST00000463372 ZNF16P17020 682 aaPredicted RBP12.32□□□□□ -0.44
C9orf3-211ENST00000463372 IGFBP5P24593 272 aa12.32□□□□□ -0.44
C9orf3-211ENST00000463372 CPOXP36551 454 aa12.32□□□□□ -0.44
C9orf3-211ENST00000463372 RHAGQ02094 409 aa12.32□□□□□ -0.44
C9orf3-211ENST00000463372 PLOD1Q02809 727 aaPredicted RBP12.32□□□□□ -0.44
C9orf3-211ENST00000463372 IL20RBQ6UXL0 311 aa12.32□□□□□ -0.44
C9orf3-211ENST00000463372 FAM47EQ6ZV65 393 aa12.32□□□□□ -0.44
C9orf3-211ENST00000463372 DCUN1D3Q8IWE4 304 aa12.32□□□□□ -0.44
C9orf3-211ENST00000463372 ARHGEF39Q8N4T4 335 aa12.32□□□□□ -0.44
C9orf3-211ENST00000463372 CLDN19Q8N6F1 224 aa12.32□□□□□ -0.44
C9orf3-211ENST00000463372 OR4K2Q8NGD2 314 aa12.32□□□□□ -0.44
C9orf3-211ENST00000463372 ASB15Q8WXK1 588 aa12.32□□□□□ -0.44
C9orf3-211ENST00000463372 GTPBP3Q969Y2 492 aaKnown RBP12.32□□□□□ -0.44
C9orf3-211ENST00000463372 RHNO1Q9BSD3 238 aa12.32□□□□□ -0.44
C9orf3-211ENST00000463372 DPH7Q9BTV6 452 aa12.32□□□□□ -0.44
C9orf3-211ENST00000463372 CHODLQ9H9P2 273 aa12.32□□□□□ -0.44
C9orf3-211ENST00000463372 ZDHHC3Q9NYG2 299 aa12.32□□□□□ -0.44
C9orf3-211ENST00000463372 KCNS2Q9ULS6 477 aa12.32□□□□□ -0.44
C9orf3-211ENST00000463372 YARS2Q9Y2Z4 477 aaKnown RBP12.32□□□□□ -0.44
C9orf3-211ENST00000463372 ARL5AQ9Y689 179 aa12.32□□□□□ -0.44
C9orf3-211ENST00000463372 TRBV11-1A0A0K0K1C0 115 aa12.31□□□□□ -0.44
C9orf3-211ENST00000463372 LOC285095A0A1B0GVY8 99 aa12.31□□□□□ -0.44
C9orf3-211ENST00000463372 SNPHO15079 494 aa12.31□□□□□ -0.44
C9orf3-211ENST00000463372 NSA2O95478 260 aaKnown RBP12.31□□□□□ -0.44
C9orf3-211ENST00000463372 DIO3P55073 304 aa12.31□□□□□ -0.44
C9orf3-211ENST00000463372 PPIDQ08752 370 aaKnown RBP12.31□□□□□ -0.44
C9orf3-211ENST00000463372 VASNQ6EMK4 673 aa12.31□□□□□ -0.44
C9orf3-211ENST00000463372 DNM1P46Q6ZS02 220 aa12.31□□□□□ -0.44
C9orf3-211ENST00000463372 SNX20Q7Z614 316 aa12.31□□□□□ -0.44
C9orf3-211ENST00000463372 FMR1NBQ8N0W7 255 aaPredicted RBP12.31□□□□□ -0.44
C9orf3-211ENST00000463372 RAB42Q8N4Z0 105 aa12.31□□□□□ -0.44
C9orf3-211ENST00000463372 ZNF611Q8N823 705 aa12.31□□□□□ -0.44
C9orf3-211ENST00000463372 CFAP61Q8NHU2 1237 aa12.31□□□□□ -0.44
C9orf3-211ENST00000463372 GCDHQ92947 438 aaPredicted RBP12.31□□□□□ -0.44
C9orf3-211ENST00000463372 TRIB1Q96RU8 372 aa12.31□□□□□ -0.44
C9orf3-211ENST00000463372 IGLV3-16A0A075B6K0 115 aa12.3□□□□□ -0.44
C9orf3-211ENST00000463372 C15orf38-AP3S2A0A0A6YYH1 394 aa12.3□□□□□ -0.44
C9orf3-211ENST00000463372 A0A0A6YYK5 440 aaPredicted RBP12.3□□□□□ -0.44
C9orf3-211ENST00000463372 MBD3L3A6NE82 208 aaPredicted RBP12.3□□□□□ -0.44
C9orf3-211ENST00000463372 SAGE2PA6NJ88 616 aa12.3□□□□□ -0.44
C9orf3-211ENST00000463372 AP2A2O94973 939 aa12.3□□□□□ -0.44
C9orf3-211ENST00000463372 FTH1P02794 183 aa12.3□□□□□ -0.44
C9orf3-211ENST00000463372 CD48P09326 243 aa12.3□□□□□ -0.44
C9orf3-211ENST00000463372 CMPK1P30085 196 aa12.3□□□□□ -0.44
C9orf3-211ENST00000463372 CCNFP41002 786 aa12.3□□□□□ -0.44
C9orf3-211ENST00000463372 CLCN2P51788 898 aa12.3□□□□□ -0.44
C9orf3-211ENST00000463372 WNT3AP56704 352 aa12.3□□□□□ -0.44
C9orf3-211ENST00000463372 GBE1Q04446 702 aa12.3□□□□□ -0.44
C9orf3-211ENST00000463372 TREML4Q6UXN2 200 aa12.3□□□□□ -0.44
C9orf3-211ENST00000463372 ZNF704Q6ZNC4 412 aaPredicted RBP12.3□□□□□ -0.44
C9orf3-211ENST00000463372 PM20D2Q8IYS1 436 aa12.3□□□□□ -0.44
C9orf3-211ENST00000463372 MBD3L2Q8NHZ7 208 aaPredicted RBP12.3□□□□□ -0.44
C9orf3-211ENST00000463372 NEIL3Q8TAT5 605 aa12.3□□□□□ -0.44
C9orf3-211ENST00000463372 SYN2Q92777 582 aaPredicted RBP12.3□□□□□ -0.44
C9orf3-211ENST00000463372 SFXN3Q9BWM7 321 aa12.3□□□□□ -0.44
C9orf3-211ENST00000463372 RBCK1Q9BYM8 510 aa12.3□□□□□ -0.44
C9orf3-211ENST00000463372 GLOD4Q9HC38 313 aa12.3□□□□□ -0.44
C9orf3-211ENST00000463372 FAM153AQ9UHL3 310 aa12.3□□□□□ -0.44
C9orf3-211ENST00000463372 SLC5A10A0PJK1 596 aa12.29□□□□□ -0.44
C9orf3-211ENST00000463372 CD8B2A6NJW9 211 aa12.29□□□□□ -0.44
C9orf3-211ENST00000463372 BIN1O00499 593 aa12.29□□□□□ -0.44
C9orf3-211ENST00000463372 HS3ST1O14792 307 aa12.29□□□□□ -0.44
C9orf3-211ENST00000463372 KIAA0513O60268 411 aa12.29□□□□□ -0.44
C9orf3-211ENST00000463372 EPOP01588 193 aa12.29□□□□□ -0.44
C9orf3-211ENST00000463372 PKMP14618 531 aaKnown RBP12.29□□□□□ -0.44
C9orf3-211ENST00000463372 DNASE1L1P49184 302 aa12.29□□□□□ -0.44
C9orf3-211ENST00000463372 XIAPP98170 497 aa12.29□□□□□ -0.44
C9orf3-211ENST00000463372 MEF2AQ02078 507 aaPredicted RBP12.29□□□□□ -0.44
C9orf3-211ENST00000463372 GRB7Q14451 532 aa12.29□□□□□ -0.44
C9orf3-211ENST00000463372 SLC1A5Q15758 541 aa12.29□□□□□ -0.44
C9orf3-211ENST00000463372 TTC23LQ6PF05 361 aa12.29□□□□□ -0.44
C9orf3-211ENST00000463372 OR2A1Q8NGT9 310 aa12.29□□□□□ -0.44
C9orf3-211ENST00000463372 ZFAND2BQ8WV99 257 aa12.29□□□□□ -0.44
C9orf3-211ENST00000463372 ZC3HAV1LQ96H79 300 aaKnown RBP12.29□□□□□ -0.44
C9orf3-211ENST00000463372 AGPAT1Q99943 283 aa12.29□□□□□ -0.44
C9orf3-211ENST00000463372 PHACTR1Q9C0D0 580 aa12.29□□□□□ -0.44
C9orf3-211ENST00000463372 SLC6A15Q9H2J7 730 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms