RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 CCDC138Q96M89 665 aa18.63■□□□□ 0.57
VARS-221ENST00000463184 LPAR4Q99677 370 aa18.63■□□□□ 0.57
VARS-221ENST00000463184 GPR21Q99679 349 aa18.63■□□□□ 0.57
VARS-221ENST00000463184 NPAS2Q99743 824 aa18.63■□□□□ 0.57
VARS-221ENST00000463184 MACROD1Q9BQ69 325 aa18.63■□□□□ 0.57
VARS-221ENST00000463184 GPAMQ9HCL2 828 aa18.63■□□□□ 0.57
VARS-221ENST00000463184 FBXO6Q9NRD1 293 aaPredicted RBP18.63■□□□□ 0.57
VARS-221ENST00000463184 ANKRD10Q9NXR5 420 aa18.63■□□□□ 0.57
VARS-221ENST00000463184 ASIC3Q9UHC3 531 aa18.63■□□□□ 0.57
VARS-221ENST00000463184 MEMO1Q9Y316 297 aa18.63■□□□□ 0.57
VARS-221ENST00000463184 SDR42E2A6NKP2 422 aa18.62■□□□□ 0.57
VARS-221ENST00000463184 NPIPA5E9PKD4 350 aa18.62■□□□□ 0.57
VARS-221ENST00000463184 SSTR2P30874 369 aa18.62■□□□□ 0.57
VARS-221ENST00000463184 TERF1P54274 439 aa18.62■□□□□ 0.57
VARS-221ENST00000463184 TAS2R50P59544 299 aa18.62■□□□□ 0.57
VARS-221ENST00000463184 TBPL1P62380 186 aa18.62■□□□□ 0.57
VARS-221ENST00000463184 C2orf54Q08AI8 447 aa18.62■□□□□ 0.57
VARS-221ENST00000463184 NSDHLQ15738 373 aa18.62■□□□□ 0.57
VARS-221ENST00000463184 SFT2D3Q587I9 215 aa18.62■□□□□ 0.57
VARS-221ENST00000463184 PAPD4Q6PIY7 484 aaKnown RBP18.62■□□□□ 0.57
VARS-221ENST00000463184 MAATS1Q7Z4T9 603 aa18.62■□□□□ 0.57
VARS-221ENST00000463184 ASPGQ86U10 573 aa18.62■□□□□ 0.57
VARS-221ENST00000463184 CAND1Q86VP6 1230 aaKnown RBP18.62■□□□□ 0.57
VARS-221ENST00000463184 LMNTD2Q8IXW0 634 aa18.62■□□□□ 0.57
VARS-221ENST00000463184 ZNF295-AS1Q8N0V1 137 aa18.62■□□□□ 0.57
VARS-221ENST00000463184 LGI4Q8N135 537 aa18.62■□□□□ 0.57
VARS-221ENST00000463184 CD200R1Q8TD46 325 aa18.62■□□□□ 0.57
VARS-221ENST00000463184 SLC13A3Q8WWT9 602 aa18.62■□□□□ 0.57
VARS-221ENST00000463184 ZNF669Q96BR6 464 aaPredicted RBP18.62■□□□□ 0.57
VARS-221ENST00000463184 FRMD6Q96NE9 622 aa18.62■□□□□ 0.57
VARS-221ENST00000463184 OR1F2PQ96R84 312 aa18.62■□□□□ 0.57
VARS-221ENST00000463184 HES7Q9BYE0 225 aa18.62■□□□□ 0.57
VARS-221ENST00000463184 NPIPA1Q9UND3 350 aa18.62■□□□□ 0.57
VARS-221ENST00000463184 SLC22A7Q9Y694 548 aa18.62■□□□□ 0.57
VARS-221ENST00000463184 DCHS2Q6V1P9 2916 aa18.62■□□□□ 0.57
VARS-221ENST00000463184 FAM187AA6NFU0 413 aa18.61■□□□□ 0.57
VARS-221ENST00000463184 GABRR3A8MPY1 467 aa18.61■□□□□ 0.57
VARS-221ENST00000463184 ASNA1O43681 348 aa18.61■□□□□ 0.57
VARS-221ENST00000463184 MLNP12872 115 aa18.61■□□□□ 0.57
VARS-221ENST00000463184 GRK3P35626 688 aa18.61■□□□□ 0.57
VARS-221ENST00000463184 RHAGQ02094 409 aa18.61■□□□□ 0.57
VARS-221ENST00000463184 ABRAXAS2Q15018 415 aa18.61■□□□□ 0.57
VARS-221ENST00000463184 SLC25A25Q6KCM7 469 aa18.61■□□□□ 0.57
VARS-221ENST00000463184 CAPN13Q6MZZ7 669 aaPredicted RBP18.61■□□□□ 0.57
VARS-221ENST00000463184 LRRC8EQ6NSJ5 796 aa18.61■□□□□ 0.57
VARS-221ENST00000463184 PIWIL4Q7Z3Z4 852 aaKnown RBP18.61■□□□□ 0.57
VARS-221ENST00000463184 SLC26A11Q86WA9 606 aa18.61■□□□□ 0.57
VARS-221ENST00000463184 C17orf64Q86WR6 236 aa18.61■□□□□ 0.57
VARS-221ENST00000463184 PDSS2Q86YH6 399 aa18.61■□□□□ 0.57
VARS-221ENST00000463184 PPIL6Q8IXY8 311 aa18.61■□□□□ 0.57
VARS-221ENST00000463184 CPNE9Q8IYJ1 553 aa18.61■□□□□ 0.57
VARS-221ENST00000463184 KCT2Q8NC54 265 aa18.61■□□□□ 0.57
VARS-221ENST00000463184 MCUQ8NE86 351 aa18.61■□□□□ 0.57
VARS-221ENST00000463184 MNS1Q8NEH6 495 aa18.61■□□□□ 0.57
VARS-221ENST00000463184 ZCCHC10Q8TBK6 192 aa18.61■□□□□ 0.57
VARS-221ENST00000463184 CALML6Q8TD86 181 aa18.61■□□□□ 0.57
VARS-221ENST00000463184 ADGRG4Q8IZF6 3080 aa18.61■□□□□ 0.57
VARS-221ENST00000463184 SCN3AQ9NY46 2000 aa18.61■□□□□ 0.57
VARS-221ENST00000463184 ZCWPW2A0A1B0GU75 182 aa18.6■□□□□ 0.57
VARS-221ENST00000463184 FEZF1A0PJY2 475 aa18.6■□□□□ 0.57
VARS-221ENST00000463184 MAGEB17A8MXT2 336 aa18.6■□□□□ 0.57
VARS-221ENST00000463184 DNALI1O14645 258 aaPredicted RBP18.6■□□□□ 0.57
VARS-221ENST00000463184 LCMT2O60294 686 aaKnown RBP18.6■□□□□ 0.57
VARS-221ENST00000463184 MAN1A2O60476 641 aa18.6■□□□□ 0.57
VARS-221ENST00000463184 RDH16O75452 317 aa18.6■□□□□ 0.57
VARS-221ENST00000463184 SP1P08047 785 aa18.6■□□□□ 0.57
VARS-221ENST00000463184 F7P08709 466 aaPredicted RBP18.6■□□□□ 0.57
VARS-221ENST00000463184 SLC35G6P0C7Q6 338 aa18.6■□□□□ 0.57
VARS-221ENST00000463184 CCND1P24385 295 aa18.6■□□□□ 0.57
VARS-221ENST00000463184 OC90Q02509 493 aaPredicted RBP18.6■□□□□ 0.57
VARS-221ENST00000463184 USP10Q14694 798 aaKnown RBP18.6■□□□□ 0.57
VARS-221ENST00000463184 HERC3Q15034 1050 aa18.6■□□□□ 0.57
VARS-221ENST00000463184 ANKRD22Q5VYY1 191 aa18.6■□□□□ 0.57
VARS-221ENST00000463184 GALNTL5Q7Z4T8 443 aa18.6■□□□□ 0.57
VARS-221ENST00000463184 SPNS2Q8IVW8 549 aa18.6■□□□□ 0.57
VARS-221ENST00000463184 SIAH3Q8IW03 269 aa18.6■□□□□ 0.57
VARS-221ENST00000463184 GHDCQ8N2G8 530 aa18.6■□□□□ 0.57
VARS-221ENST00000463184 NAT8LQ8N9F0 302 aa18.6■□□□□ 0.57
VARS-221ENST00000463184 PEX11GQ96HA9 241 aa18.6■□□□□ 0.57
VARS-221ENST00000463184 TSPAN10Q9H1Z9 355 aaPredicted RBP18.6■□□□□ 0.57
VARS-221ENST00000463184 LANCL2Q9NS86 450 aa18.6■□□□□ 0.57
VARS-221ENST00000463184 LRFN1Q9P244 771 aa18.6■□□□□ 0.57
VARS-221ENST00000463184 NAALAD2Q9Y3Q0 740 aa18.6■□□□□ 0.57
VARS-221ENST00000463184 POLQO75417 2590 aa18.6■□□□□ 0.57
VARS-221ENST00000463184 F8P00451 2351 aa18.6■□□□□ 0.57
VARS-221ENST00000463184 AKAP9Q99996 3911 aa18.59■□□□□ 0.57
VARS-221ENST00000463184 C19orf84I3L1E1 186 aa18.59■□□□□ 0.57
VARS-221ENST00000463184 ZNF500O60304 480 aaPredicted RBP18.59■□□□□ 0.57
VARS-221ENST00000463184 CDC123O75794 336 aaPredicted RBP18.59■□□□□ 0.57
VARS-221ENST00000463184 NEURL1O76050 574 aa18.59■□□□□ 0.57
VARS-221ENST00000463184 C8GP07360 202 aa18.59■□□□□ 0.57
VARS-221ENST00000463184 ABOP16442 354 aa18.59■□□□□ 0.57
VARS-221ENST00000463184 CAPN3P20807 821 aa18.59■□□□□ 0.57
VARS-221ENST00000463184 IVDP26440 423 aa18.59■□□□□ 0.57
VARS-221ENST00000463184 SLC1A2P43004 574 aa18.59■□□□□ 0.57
VARS-221ENST00000463184 ST13P50502 369 aaKnown RBP18.59■□□□□ 0.57
VARS-221ENST00000463184 OR4D2P58180 307 aa18.59■□□□□ 0.57
VARS-221ENST00000463184 SLC26A5P58743 744 aa18.59■□□□□ 0.57
VARS-221ENST00000463184 CDSNQ15517 529 aa18.59■□□□□ 0.57
VARS-221ENST00000463184 RNASEH2BQ5TBB1 312 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms