RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 SEPHS1P49903 392 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 ARFIP2P53365 341 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 SNRPNP63162 240 aaKnown RBP13.69□□□□□ -0.22
COL6A1-202ENST00000463060 INSM1Q01101 510 aaPredicted RBP13.69□□□□□ -0.22
COL6A1-202ENST00000463060 CYP4F3Q08477 520 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 SF3A3Q12874 501 aaKnown RBP eCLIP13.69□□□□□ -0.22
COL6A1-202ENST00000463060 DDX39BQ13838 428 aaKnown RBP13.69□□□□□ -0.22
COL6A1-202ENST00000463060 SPIDRQ14159 915 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 SMU1Q2TAY7 513 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 PRTGQ2VWP7 1150 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 LSM12Q3MHD2 195 aaKnown RBP13.69□□□□□ -0.22
COL6A1-202ENST00000463060 C6orf136Q5SQH8 315 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 SNAP47Q5SQN1 464 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 MANEAQ5SRI9 462 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 OGFOD2Q6N063 350 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 CHSY3Q70JA7 882 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 B3GNT8Q7Z7M8 397 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 ANKS4BQ8N8V4 417 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 CEP70Q8NHQ1 597 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 BCAS4Q8TDM0 211 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 CHTF18Q8WVB6 975 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 METTL2AQ96IZ6 378 aaKnown RBP13.69□□□□□ -0.22
COL6A1-202ENST00000463060 FCRL1Q96LA6 429 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 PPP1R36Q96LQ0 422 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 F2RL3Q96RI0 385 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 SERPINI1Q99574 410 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 MACROD1Q9BQ69 325 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 OR51B5Q9H339 312 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 KLHL31Q9H511 634 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 SIDT1Q9NXL6 827 aaKnown RBP13.69□□□□□ -0.22
COL6A1-202ENST00000463060 GIMAP2Q9UG22 337 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 PLCL2Q9UPR0 1127 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 GOLGA8QA0A0J9YX86 632 aa13.68□□□□□ -0.22
COL6A1-202ENST00000463060 FITM1A5D6W6 292 aa13.68□□□□□ -0.22
COL6A1-202ENST00000463060 GOLGA8OA6NCC3 632 aa13.68□□□□□ -0.22
COL6A1-202ENST00000463060 GOLGA8NF8WBI6 632 aa13.68□□□□□ -0.22
COL6A1-202ENST00000463060 SLC30A4O14863 429 aa13.68□□□□□ -0.22
COL6A1-202ENST00000463060 PEX11AO75192 247 aa13.68□□□□□ -0.22
COL6A1-202ENST00000463060 KLHL18O94889 574 aa13.68□□□□□ -0.22
COL6A1-202ENST00000463060 CCKBRP32239 447 aa13.68□□□□□ -0.22
COL6A1-202ENST00000463060 MLLT3P42568 568 aaPredicted RBP13.68□□□□□ -0.22
COL6A1-202ENST00000463060 GCGRP47871 477 aa13.68□□□□□ -0.22
COL6A1-202ENST00000463060 CYP4F2P78329 520 aa13.68□□□□□ -0.22
COL6A1-202ENST00000463060 KCNAB1Q14722 419 aa13.68□□□□□ -0.22
COL6A1-202ENST00000463060 RFTN2Q52LD8 501 aaPredicted RBP13.68□□□□□ -0.22
COL6A1-202ENST00000463060 TMEM35AQ53FP2 167 aa13.68□□□□□ -0.22
COL6A1-202ENST00000463060 KHDRBS2Q5VWX1 349 aaKnown RBP13.68□□□□□ -0.22
COL6A1-202ENST00000463060 METTL21CQ5VZV1 264 aa13.68□□□□□ -0.22
COL6A1-202ENST00000463060 GALNT18Q6P9A2 607 aa13.68□□□□□ -0.22
COL6A1-202ENST00000463060 ASPGQ86U10 573 aa13.68□□□□□ -0.22
COL6A1-202ENST00000463060 ZFAND4Q86XD8 727 aa13.68□□□□□ -0.22
COL6A1-202ENST00000463060 CAMKVQ8NCB2 501 aa13.68□□□□□ -0.22
COL6A1-202ENST00000463060 CCT6BQ92526 530 aa13.68□□□□□ -0.22
COL6A1-202ENST00000463060 MS4A6EQ96DS6 147 aa13.68□□□□□ -0.22
COL6A1-202ENST00000463060 ZNF717Q9BY31 904 aaPredicted RBP13.68□□□□□ -0.22
COL6A1-202ENST00000463060 LHX9Q9NQ69 397 aa13.68□□□□□ -0.22
COL6A1-202ENST00000463060 TCF7L2Q9NQB0 619 aa13.68□□□□□ -0.22
COL6A1-202ENST00000463060 RIC8BQ9NVN3 520 aa13.68□□□□□ -0.22
COL6A1-202ENST00000463060 C1orf109Q9NX04 203 aa13.68□□□□□ -0.22
COL6A1-202ENST00000463060 SLC12A4Q9UP95 1085 aa13.68□□□□□ -0.22
COL6A1-202ENST00000463060 DMXL1Q9Y485 3027 aa13.68□□□□□ -0.22
COL6A1-202ENST00000463060 PTPRZ1P23471 2315 aaPredicted RBP13.67□□□□□ -0.22
COL6A1-202ENST00000463060 C4orf51C9J302 202 aa13.67□□□□□ -0.22
COL6A1-202ENST00000463060 SEMA3DO95025 777 aa13.67□□□□□ -0.22
COL6A1-202ENST00000463060 ALDOCP09972 364 aaKnown RBP13.67□□□□□ -0.22
COL6A1-202ENST00000463060 CDK4P11802 303 aa13.67□□□□□ -0.22
COL6A1-202ENST00000463060 LBPP18428 481 aa13.67□□□□□ -0.22
COL6A1-202ENST00000463060 BSGP35613 385 aa13.67□□□□□ -0.22
COL6A1-202ENST00000463060 ARFIP1P53367 373 aa13.67□□□□□ -0.22
COL6A1-202ENST00000463060 VSX2P58304 361 aaPredicted RBP13.67□□□□□ -0.22
COL6A1-202ENST00000463060 PHEXP78562 749 aa13.67□□□□□ -0.22
COL6A1-202ENST00000463060 EMX2Q04743 252 aa13.67□□□□□ -0.22
COL6A1-202ENST00000463060 C16orf72Q14CZ0 275 aa13.67□□□□□ -0.22
COL6A1-202ENST00000463060 HKDC1Q2TB90 917 aa13.67□□□□□ -0.22
COL6A1-202ENST00000463060 AP5B1Q2VPB7 878 aa13.67□□□□□ -0.22
COL6A1-202ENST00000463060 DEFB110Q30KQ9 67 aa13.67□□□□□ -0.22
COL6A1-202ENST00000463060 WASHC2DQ5SRD0 308 aa13.67□□□□□ -0.22
COL6A1-202ENST00000463060 GKAP1Q5VSY0 366 aaPredicted RBP13.67□□□□□ -0.22
COL6A1-202ENST00000463060 RBM44Q6ZP01 1051 aaKnown RBP13.67□□□□□ -0.22
COL6A1-202ENST00000463060 METTL4Q8N3J2 472 aa13.67□□□□□ -0.22
COL6A1-202ENST00000463060 BMPERQ8N8U9 685 aa13.67□□□□□ -0.22
COL6A1-202ENST00000463060 KCT2Q8NC54 265 aa13.67□□□□□ -0.22
COL6A1-202ENST00000463060 RCBTB1Q8NDN9 531 aa13.67□□□□□ -0.22
COL6A1-202ENST00000463060 TUBGCP3Q96CW5 907 aa13.67□□□□□ -0.22
COL6A1-202ENST00000463060 ZNF501Q96CX3 271 aaPredicted RBP13.67□□□□□ -0.22
COL6A1-202ENST00000463060 APIPQ96GX9 242 aa13.67□□□□□ -0.22
COL6A1-202ENST00000463060 PPP3R2Q96LZ3 170 aa13.67□□□□□ -0.22
COL6A1-202ENST00000463060 ZNF385DQ9H6B1 395 aa13.67□□□□□ -0.22
COL6A1-202ENST00000463060 LRTM1Q9HBL6 345 aa13.67□□□□□ -0.22
COL6A1-202ENST00000463060 PRDM7Q9NQW5 492 aa13.67□□□□□ -0.22
COL6A1-202ENST00000463060 NMRK1Q9NWW6 199 aa13.67□□□□□ -0.22
COL6A1-202ENST00000463060 SOHLH2Q9NX45 425 aa13.67□□□□□ -0.22
COL6A1-202ENST00000463060 ASIC5Q9NY37 505 aa13.67□□□□□ -0.22
COL6A1-202ENST00000463060 ARL2BPQ9Y2Y0 163 aa13.67□□□□□ -0.22
COL6A1-202ENST00000463060 PLPP1O14494 284 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 NDUFAB1O14561 156 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 ZSCAN9O15535 394 aaPredicted RBP13.66□□□□□ -0.22
COL6A1-202ENST00000463060 NDUFS4O43181 175 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 MAP3K7O43318 606 aa13.66□□□□□ -0.22
COL6A1-202ENST00000463060 STATHP02808 62 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms