RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	SYF2	O95926	243 aa	Known RBP	10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	MYBL2	P10244	700 aa		10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	NME2	P22392	152 aa		10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	EEF1D	P29692	281 aa	Known RBP	10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	SMS	P52788	366 aa		10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	CCZ1B	P86790	482 aa		10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	CCZ1	P86791	482 aa	Predicted RBP	10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	ALDH6A1	Q02252	535 aa	Known RBP	10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	ABRAXAS2	Q15018	415 aa		10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	TTLL9	Q3SXZ7	439 aa		10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	TTC27	Q6P3X3	843 aa		10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	UBE2R2	Q712K3	238 aa	Predicted RBP	10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	CTAGE6	Q86UF2	777 aa		10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	MARVELD2	Q8N4S9	558 aa		10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	OR4K1	Q8NGD4	311 aa		10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	ZCCHC10	Q8TBK6	192 aa		10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	AGAP11	Q8TF27	550 aa		10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	OR1F2P	Q96R84	312 aa		10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	OLFM1	Q99784	485 aa		10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	KCNF1	Q9H3M0	494 aa		10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	CCDC177	Q9NQR7	707 aa	Predicted RBP	10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	ABCF3	Q9NUQ8	709 aa		10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	PDE10A	Q9Y233	779 aa		10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	VPS9D1	Q9Y2B5	631 aa		10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	NAALAD2	Q9Y3Q0	740 aa		10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	NEU2	Q9Y3R4	380 aa		10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	SLC22A7	Q9Y694	548 aa		10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	GTF3C1	Q12789	2109 aa		10.48	□□□□□ -0.73
PTPN7-204	ENST00000462815	IGKV3D-11	A0A0A0MRZ8	115 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	ZNF860	A6NHJ4	632 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815		E9PLN8	166 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	CDK2AP1	O14519	115 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	PFDN6	O15212	129 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	ZBTB14	O43829	449 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	GALR3	O60755	368 aa	Predicted RBP	10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	CDC123	O75794	336 aa	Predicted RBP	10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	TSPAN12	O95859	305 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	B3GALT4	O96024	378 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	FGG	P02679	453 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	ESRRA	P11474	423 aa	Predicted RBP	10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	CD46	P15529	392 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	NPPB	P16860	134 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	TPP2	P29144	1249 aa	Predicted RBP	10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	TRHR	P34981	398 aa	Predicted RBP	10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	DEK	P35659	375 aa	Known RBP	10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	CASP6	P55212	293 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	MPP1	Q00013	466 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	TFF3	Q07654	80 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	DHX34	Q14147	1143 aa	Known RBP	10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	TRIP13	Q15645	432 aa	Predicted RBP	10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	PHKG1	Q16816	387 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	THEMIS2	Q5TEJ8	643 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	MFSD4B	Q5TF39	518 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	SLC25A25	Q6KCM7	469 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	ASPG	Q86U10	573 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	TXLNB	Q8N3L3	684 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	CPSF7	Q8N684	471 aa	Known RBP	10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	SLC5A8	Q8N695	610 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	TMEM178A	Q8NBL3	297 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	MFSD9	Q8NBP5	474 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	CAMKV	Q8NCB2	501 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	ZNF740	Q8NDX6	193 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	NFAM1	Q8NET5	270 aa	Predicted RBP	10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	ABHD11	Q8NFV4	315 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	ZNF669	Q96BR6	464 aa	Predicted RBP	10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	PEX11G	Q96HA9	241 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	SERPINB12	Q96P63	405 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	OR4K3	Q96R72	315 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	VKORC1	Q9BQB6	163 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	AARSD1	Q9BTE6	412 aa	Known RBP	10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	SPNS1	Q9H2V7	528 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	ANKH	Q9HCJ1	492 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	LRFN1	Q9P244	771 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	GUCA1B	Q9UMX6	200 aa		10.47	□□□□□ -0.73
PTPN7-204	ENST00000462815	SCN3A	Q9NY46	2000 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	C4orf51	C9J302	202 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	SLC25A12	O75746	678 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	HAUS5	O94927	633 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	FH	P07954	510 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	CDH1	P12830	882 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	MLN	P12872	115 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	PAM	P19021	973 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	IL10	P22301	178 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	GABRB3	P28472	473 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	PTGER1	P34995	402 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	NR0B1	P51843	470 aa	Known RBP	10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	HYAL2	Q12891	473 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	NSDHL	Q15738	373 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	CAPN13	Q6MZZ7	669 aa	Predicted RBP	10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	AGTRAP	Q6RW13	159 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	LCTL	Q6UWM7	567 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	C3P1	Q6ZMU1	363 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	CDH24	Q86UP0	819 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	GHDC	Q8N2G8	530 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	MCU	Q8NE86	351 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	MCOLN3	Q8TDD5	553 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	EEF1AKMT1	Q8WVE0	214 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	SLC13A3	Q8WWT9	602 aa		10.46	□□□□□ -0.73
PTPN7-204	ENST00000462815	SIGLEC10	Q96LC7	697 aa		10.46	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms