RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 SLC28A1O00337 649 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 FOXE1O00358 373 aaPredicted RBP12.86□□□□□ -0.35
PBRM1-219ENST00000462207 TM4SF5O14894 197 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 LSM1O15116 133 aaKnown RBP12.86□□□□□ -0.35
PBRM1-219ENST00000462207 CLEC3AO75596 197 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 ARFIP2P53365 341 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 PHEXP78562 749 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 RELAQ04206 551 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 ZFP36L1Q07352 338 aaKnown RBP12.86□□□□□ -0.35
PBRM1-219ENST00000462207 ILKQ13418 452 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 CLPPQ16740 277 aaPredicted RBP12.86□□□□□ -0.35
PBRM1-219ENST00000462207 TOR1AIP1Q5JTV8 583 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 SWT1Q5T5J6 900 aaKnown RBP12.86□□□□□ -0.35
PBRM1-219ENST00000462207 TMEM198Q66K66 360 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 NXNQ6DKJ4 435 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 RBM44Q6ZP01 1051 aaKnown RBP12.86□□□□□ -0.35
PBRM1-219ENST00000462207 CSNK1A1LQ8N752 337 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 KCT2Q8NC54 265 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 BCAS4Q8TDM0 211 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 SLC13A3Q8WWT9 602 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 RERGQ96A58 199 aaPredicted RBP12.86□□□□□ -0.35
PBRM1-219ENST00000462207 RNF31Q96EP0 1072 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 APIPQ96GX9 242 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 MARK4Q96L34 752 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 SORBS1Q9BX66 1292 aaKnown RBP12.86□□□□□ -0.35
PBRM1-219ENST00000462207 E9PBE3 544 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 RTCAO00442 366 aaKnown RBP12.86□□□□□ -0.35
PBRM1-219ENST00000462207 NDUFAB1O14561 156 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 TOX3O15405 576 aaPredicted RBP12.86□□□□□ -0.35
PBRM1-219ENST00000462207 RGS14O43566 566 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 KLHL41O60662 606 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 B3GALT4O96024 378 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 FTH1P19P0C7X4 201 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 SIM1P81133 766 aaPredicted RBP12.86□□□□□ -0.35
PBRM1-219ENST00000462207 LSM12Q3MHD2 195 aaKnown RBP12.86□□□□□ -0.35
PBRM1-219ENST00000462207 ZC3H12BQ5HYM0 836 aaKnown RBP12.86□□□□□ -0.35
PBRM1-219ENST00000462207 SPDYAQ5MJ70 313 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 RIPOR1Q6ZS17 1223 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 ALYREFQ86V81 257 aaKnown RBP12.86□□□□□ -0.35
PBRM1-219ENST00000462207 KMT5CQ86Y97 462 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 GBP7Q8N8V2 638 aaPredicted RBP12.86□□□□□ -0.35
PBRM1-219ENST00000462207 TRPV3Q8NET8 790 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 TTLQ8NG68 377 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 ZCCHC10Q8TBK6 192 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 TM4SF19Q96DZ7 209 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 THAP11Q96EK4 314 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 SIKE1Q9BRV8 207 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 C1orf50Q9BV19 199 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 BRF2Q9HAW0 419 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 TCF7L2Q9NQB0 619 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 G3BP2Q9UN86 482 aaKnown RBP12.86□□□□□ -0.35
PBRM1-219ENST00000462207 PLCL2Q9UPR0 1127 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 MRPS2Q9Y399 296 aaKnown RBP12.86□□□□□ -0.35
PBRM1-219ENST00000462207 PCDHGA1Q9Y5H4 931 aa12.86□□□□□ -0.35
PBRM1-219ENST00000462207 SERTM1A2A2V5 107 aa12.85□□□□□ -0.35
PBRM1-219ENST00000462207 LRIT2A6NDA9 550 aa12.85□□□□□ -0.35
PBRM1-219ENST00000462207 TMEM150CB9EJG8 249 aa12.85□□□□□ -0.35
PBRM1-219ENST00000462207 PRR35P0CG20 571 aa12.85□□□□□ -0.35
PBRM1-219ENST00000462207 HSD3B1P14060 373 aa12.85□□□□□ -0.35
PBRM1-219ENST00000462207 CSRP1P21291 193 aaKnown RBP12.85□□□□□ -0.35
PBRM1-219ENST00000462207 HSD3B2P26439 372 aa12.85□□□□□ -0.35
PBRM1-219ENST00000462207 SERPINB1P30740 379 aa12.85□□□□□ -0.35
PBRM1-219ENST00000462207 RPL38P63173 70 aaKnown RBP12.85□□□□□ -0.35
PBRM1-219ENST00000462207 TBL3Q12788 808 aaKnown RBP12.85□□□□□ -0.35
PBRM1-219ENST00000462207 RFTN2Q52LD8 501 aaPredicted RBP12.85□□□□□ -0.35
PBRM1-219ENST00000462207 WASHC2DQ5SRD0 308 aa12.85□□□□□ -0.35
PBRM1-219ENST00000462207 C10orf62Q5T681 223 aaPredicted RBP12.85□□□□□ -0.35
PBRM1-219ENST00000462207 KHDRBS2Q5VWX1 349 aaKnown RBP12.85□□□□□ -0.35
PBRM1-219ENST00000462207 CDCP2Q5VXM1 449 aa12.85□□□□□ -0.35
PBRM1-219ENST00000462207 ACAD11Q709F0 780 aa12.85□□□□□ -0.35
PBRM1-219ENST00000462207 LARP4Q71RC2 724 aaKnown RBP eCLIP12.85□□□□□ -0.35
PBRM1-219ENST00000462207 UBE3DQ7Z6J8 389 aa12.85□□□□□ -0.35
PBRM1-219ENST00000462207 DTWD1Q8N5C7 304 aa12.85□□□□□ -0.35
PBRM1-219ENST00000462207 C1orf52Q8N6N3 182 aaKnown RBP12.85□□□□□ -0.35
PBRM1-219ENST00000462207 WDR48Q8TAF3 677 aa12.85□□□□□ -0.35
PBRM1-219ENST00000462207 NT5CQ8TCD5 201 aa12.85□□□□□ -0.35
PBRM1-219ENST00000462207 CMTM7Q96FZ5 175 aa12.85□□□□□ -0.35
PBRM1-219ENST00000462207 SLC45A3Q96JT2 553 aa12.85□□□□□ -0.35
PBRM1-219ENST00000462207 RILPQ96NA2 401 aa12.85□□□□□ -0.35
PBRM1-219ENST00000462207 MYCBPQ99417 103 aaPredicted RBP12.85□□□□□ -0.35
PBRM1-219ENST00000462207 SLC6A16Q9GZN6 736 aa12.85□□□□□ -0.35
PBRM1-219ENST00000462207 CHRNA10Q9GZZ6 450 aa12.85□□□□□ -0.35
PBRM1-219ENST00000462207 SPRTNQ9H040 489 aaPredicted RBP12.85□□□□□ -0.35
PBRM1-219ENST00000462207 LRTM1Q9HBL6 345 aa12.85□□□□□ -0.35
PBRM1-219ENST00000462207 RIC8BQ9NVN3 520 aa12.85□□□□□ -0.35
PBRM1-219ENST00000462207 VPS29Q9UBQ0 182 aa12.85□□□□□ -0.35
PBRM1-219ENST00000462207 ADGRE2Q9UHX3 823 aa12.85□□□□□ -0.35
PBRM1-219ENST00000462207 RUVBL1Q9Y265 456 aaKnown RBP12.85□□□□□ -0.35
PBRM1-219ENST00000462207 SPEGQ15772 3267 aa12.85□□□□□ -0.35
PBRM1-219ENST00000462207 PLPP1O14494 284 aa12.84□□□□□ -0.35
PBRM1-219ENST00000462207 SLC30A4O14863 429 aa12.84□□□□□ -0.35
PBRM1-219ENST00000462207 RSL1D1O76021 490 aaKnown RBP12.84□□□□□ -0.35
PBRM1-219ENST00000462207 MED26O95402 600 aa12.84□□□□□ -0.35
PBRM1-219ENST00000462207 SERPINA6P08185 405 aa12.84□□□□□ -0.35
PBRM1-219ENST00000462207 ALDOCP09972 364 aaKnown RBP12.84□□□□□ -0.35
PBRM1-219ENST00000462207 SLC35G6P0C7Q6 338 aa12.84□□□□□ -0.35
PBRM1-219ENST00000462207 GSTM2P28161 218 aa12.84□□□□□ -0.35
PBRM1-219ENST00000462207 NOVA1P51513 510 aaKnown RBP12.84□□□□□ -0.35
PBRM1-219ENST00000462207 E2F1Q01094 437 aa12.84□□□□□ -0.35
PBRM1-219ENST00000462207 ZNF33BQ06732 778 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms