RNA–Protein interactions for RNA: ENST00000461063.6

SOX2-OT-202, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 566 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-202ENST00000461063 BEST3Q8N1M1 668 aa8.28□□□□□ -1.08
SOX2-OT-202ENST00000461063 AFAP1L2Q8N4X5 818 aa8.28□□□□□ -1.08
SOX2-OT-202ENST00000461063 ABHD11Q8NFV4 315 aa8.28□□□□□ -1.08
SOX2-OT-202ENST00000461063 OR4K1Q8NGD4 311 aa8.28□□□□□ -1.08
SOX2-OT-202ENST00000461063 M1APQ8TC57 530 aa8.28□□□□□ -1.08
SOX2-OT-202ENST00000461063 GRK7Q8WTQ7 553 aa8.28□□□□□ -1.08
SOX2-OT-202ENST00000461063 PYCR2Q96C36 320 aa8.28□□□□□ -1.08
SOX2-OT-202ENST00000461063 MOCOSQ96EN8 888 aa8.28□□□□□ -1.08
SOX2-OT-202ENST00000461063 PEX11GQ96HA9 241 aa8.28□□□□□ -1.08
SOX2-OT-202ENST00000461063 ZNF354BQ96LW1 612 aa8.28□□□□□ -1.08
SOX2-OT-202ENST00000461063 OSBPL9Q96SU4 736 aa8.28□□□□□ -1.08
SOX2-OT-202ENST00000461063 NPAS2Q99743 824 aa8.28□□□□□ -1.08
SOX2-OT-202ENST00000461063 HAUS8Q9BT25 410 aa8.28□□□□□ -1.08
SOX2-OT-202ENST00000461063 SARGQ9BW04 601 aa8.28□□□□□ -1.08
SOX2-OT-202ENST00000461063 RBCK1Q9BYM8 510 aa8.28□□□□□ -1.08
SOX2-OT-202ENST00000461063 LANCL2Q9NS86 450 aa8.28□□□□□ -1.08
SOX2-OT-202ENST00000461063 SLC17A6Q9P2U8 582 aa8.28□□□□□ -1.08
SOX2-OT-202ENST00000461063 SEC14L3Q9UDX4 400 aa8.28□□□□□ -1.08
SOX2-OT-202ENST00000461063 MDC1Q14676 2089 aaKnown RBP8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 TRGV8A0A0C4DH27 118 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 GOLGA6L10A0A0M3HER8 536 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 ENO4A6NNW6 628 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 MAGEB17A8MXT2 336 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 PRSS44E7EML9 344 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 NDUFS4O43181 175 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 OR1F1O43749 312 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 NRDCO43847 1150 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 MAN1A2O60476 641 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 DNAJB6O75190 326 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 CDC123O75794 336 aaPredicted RBP8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 HIST1H2AGP0C0S8 130 aaPredicted RBP8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 HIST1H2ADP20671 130 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 IL10P22301 178 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 TNFRSF8P28908 595 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 CD96P40200 585 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 CA7P43166 264 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 ST13P50502 369 aaKnown RBP8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 IL2P60568 153 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 MEF2AQ02078 507 aaPredicted RBP8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 ART3Q13508 389 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 ABRAXAS2Q15018 415 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 HERC3Q15034 1050 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 PPP1R7Q15435 360 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 NSDHLQ15738 373 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 EXT1Q16394 746 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 MEP1AQ16819 746 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 SFT2D3Q587I9 215 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 DUPD1Q68J44 220 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 PAPD4Q6PIY7 484 aaKnown RBP8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 GALNT7Q86SF2 657 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 SLC35F6Q8N357 371 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 ZNF740Q8NDX6 193 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 MDS2Q8NDY4 140 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 PLPP5Q8NEB5 264 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 OR5T3Q8NGG3 340 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 OR56A3Q8NH54 315 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 GABPB2Q8TAK5 448 aaPredicted RBP8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 ITLN2Q8WWU7 325 aaPredicted RBP8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 TSLPQ969D9 159 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 CERS2Q96G23 380 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 SNF8Q96H20 258 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 CCDC120Q96HB5 630 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 HIST1H2AHQ96KK5 128 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 SIGLEC12Q96PQ1 595 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 OR4K3Q96R72 315 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 OR1F2PQ96R84 312 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 HIST1H2AJQ99878 128 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 UTP23Q9BRU9 249 aaKnown RBP8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 NAT9Q9BTE0 207 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 H2AFJQ9BTM1 129 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 HES7Q9BYE0 225 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 UNKQ9C0B0 810 aaKnown RBP8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 KCNK13Q9HB14 408 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 MMP25Q9NPA2 562 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 ANKRD10Q9NXR5 420 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 ARL15Q9NXU5 204 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 ASIC3Q9UHC3 531 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 PCDHGB6Q9Y5F9 930 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 DCHS2Q6V1P9 2916 aa8.27□□□□□ -1.09
SOX2-OT-202ENST00000461063 CSMD2Q7Z408 3487 aa8.26□□□□□ -1.09
SOX2-OT-202ENST00000461063 TRBC2A0A5B9 178 aa8.26□□□□□ -1.09
SOX2-OT-202ENST00000461063 CTAGE15A4D2H0 777 aa8.26□□□□□ -1.09
SOX2-OT-202ENST00000461063 CCL21O00585 134 aa8.26□□□□□ -1.09
SOX2-OT-202ENST00000461063 CES2O00748 559 aa8.26□□□□□ -1.09
SOX2-OT-202ENST00000461063 CHST10O43529 356 aa8.26□□□□□ -1.09
SOX2-OT-202ENST00000461063 GALR3O60755 368 aaPredicted RBP8.26□□□□□ -1.09
SOX2-OT-202ENST00000461063 SLC19A2O60779 497 aa8.26□□□□□ -1.09
SOX2-OT-202ENST00000461063 B3GALT4O96024 378 aa8.26□□□□□ -1.09
SOX2-OT-202ENST00000461063 FHP07954 510 aa8.26□□□□□ -1.09
SOX2-OT-202ENST00000461063 ALOX12P18054 663 aa8.26□□□□□ -1.09
SOX2-OT-202ENST00000461063 IVDP26440 423 aa8.26□□□□□ -1.09
SOX2-OT-202ENST00000461063 GRNP28799 593 aaKnown RBP8.26□□□□□ -1.09
SOX2-OT-202ENST00000461063 AP1S2P56377 157 aa8.26□□□□□ -1.09
SOX2-OT-202ENST00000461063 OR4D2P58180 307 aa8.26□□□□□ -1.09
SOX2-OT-202ENST00000461063 RBPJQ06330 500 aa8.26□□□□□ -1.09
SOX2-OT-202ENST00000461063 ACTN3Q08043 901 aaPredicted RBP8.26□□□□□ -1.09
SOX2-OT-202ENST00000461063 PWP1Q13610 501 aa8.26□□□□□ -1.09
SOX2-OT-202ENST00000461063 CSHL1Q14406 222 aa8.26□□□□□ -1.09
SOX2-OT-202ENST00000461063 USP10Q14694 798 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms