RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 CCDC115Q96NT0 180 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 OSER1Q9NX31 292 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 COPZ2Q9P299 210 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 HCN2Q9UL51 889 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 RIMKLBQ9ULI2 386 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 TRIM64A6NGJ6 449 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 TRIM64BA6NI03 449 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 MTPNP58546 118 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 TAS2R39P59534 338 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 CSTF1Q05048 431 aaKnown RBP6□□□□□ -1.45
VPS13D-202ENST00000460333 GALEQ14376 348 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 PON2Q15165 354 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 ESCO2Q56NI9 601 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 SIRPB2Q5JXA9 342 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 RANBP10Q6VN20 620 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 ZNF534Q76KX8 674 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 ZC3HC1Q86WB0 502 aaKnown RBP6□□□□□ -1.45
VPS13D-202ENST00000460333 LINC00471Q8N535 108 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 OR8K5Q8NH50 307 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 ANGPTL6Q8NI99 470 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 ASPNQ9BXN1 380 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 SAV1Q9H4B6 383 aaPredicted RBP6□□□□□ -1.45
VPS13D-202ENST00000460333 CWH43Q9H720 699 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 RNF121Q9H920 327 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 ARNT2Q9HBZ2 717 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 ERVK-18Q9QC07 812 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 GMEB2Q9UKD1 530 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 ALG5Q9Y673 324 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 CCL16O15467 120 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 PRKYO43930 277 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 PCDH8O95206 1070 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 NFATC1O95644 943 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 ADH1CP00326 375 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 MT-ND2P03891 347 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 HLA-DPB1P04440 258 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 NAT1P18440 290 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 UQCRC1P31930 480 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 CDK10Q15131 360 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 CPTPQ5TA50 214 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 SLX4IPQ5VYV7 408 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 GPR153Q6NV75 609 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 PHOSPHO2Q8TCD6 241 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 ASB15Q8WXK1 588 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 AUTS2Q8WXX7 1259 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 ACOT12Q8WYK0 555 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 KAT2AQ92830 837 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 CRISPLD2Q9H0B8 497 aa6□□□□□ -1.45
VPS13D-202ENST00000460333 ZNF490Q9ULM2 529 aaPredicted RBP6□□□□□ -1.45
VPS13D-202ENST00000460333 TDRD15B5MCY1 1934 aaKnown RBP5.99□□□□□ -1.45
VPS13D-202ENST00000460333 SOBPA7XYQ1 873 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 FFAR3O14843 346 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 GPR42O15529 346 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 ATG13O75143 517 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 CDRT1O95170 752 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 CLIC3O95833 236 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 HNRNPA1P09651 372 aaKnown RBP eCLIP5.99□□□□□ -1.45
VPS13D-202ENST00000460333 VARSP26640 1264 aaKnown RBP5.99□□□□□ -1.45
VPS13D-202ENST00000460333 SLC1A2P43004 574 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 TSPAN5P62079 268 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 ABHD18Q0P651 414 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 PTGR1Q14914 329 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 OXA1LQ15070 435 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 TXNDC8Q6A555 127 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 TRMT11Q7Z4G4 463 aaKnown RBP5.99□□□□□ -1.45
VPS13D-202ENST00000460333 UBE2J2Q8N2K1 259 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 C2CD4AQ8NCU7 369 aaPredicted RBP5.99□□□□□ -1.45
VPS13D-202ENST00000460333 ZFP90Q8TF47 636 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 TMEM80Q96HE8 168 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 FCRL3Q96P31 734 aaPredicted RBP5.99□□□□□ -1.45
VPS13D-202ENST00000460333 SMAD5Q99717 465 aaKnown RBP5.99□□□□□ -1.45
VPS13D-202ENST00000460333 PSD2Q9BQI7 771 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 KLF16Q9BXK1 252 aaPredicted RBP5.99□□□□□ -1.45
VPS13D-202ENST00000460333 UCK2Q9BZX2 261 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 PPIL3Q9H2H8 161 aaKnown RBP5.99□□□□□ -1.45
VPS13D-202ENST00000460333 TLR9Q9NR96 1032 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 ZCWPW2A0A1B0GU75 182 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 NPEPPSL1A6NEC2 478 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 GRXCR2A6NFK2 248 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 MAGEB17A8MXT2 336 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 hCG_2039718K7EN88 272 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 B4GALT3O60512 393 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 IGLV3-27P01718 113 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 APODP05090 189 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 SERPIND1P05546 499 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 DNASE1P24855 282 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 CSTF2P33240 577 aaKnown RBP eCLIP5.99□□□□□ -1.45
VPS13D-202ENST00000460333 CHRNA4P43681 627 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 GDI2P50395 445 aaKnown RBP5.99□□□□□ -1.45
VPS13D-202ENST00000460333 AP2S1P53680 142 aaPredicted RBP5.99□□□□□ -1.45
VPS13D-202ENST00000460333 CXCR4P61073 352 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 NFE2L1Q14494 772 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 ATAD3CQ5T2N8 411 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 AFMIDQ63HM1 303 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 OLFML2AQ68BL7 652 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 ARSKQ6UWY0 536 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 CDHR3Q6ZTQ4 885 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 MTSS1LQ765P7 747 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 KLHL36Q8N4N3 616 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 OR13F1Q8NGS4 319 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 FBXO27Q8NI29 283 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms