RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 ECHDC3Q96DC8 303 aa13.62□□□□□ -0.23
SCFD1-203ENST00000458591 FCRL1Q96LA6 429 aa13.62□□□□□ -0.23
SCFD1-203ENST00000458591 PITX2Q99697 317 aa13.62□□□□□ -0.23
SCFD1-203ENST00000458591 ITPAQ9BY32 194 aa13.62□□□□□ -0.23
SCFD1-203ENST00000458591 ANKHQ9HCJ1 492 aa13.62□□□□□ -0.23
SCFD1-203ENST00000458591 ZNF226Q9NYT6 803 aa13.62□□□□□ -0.23
SCFD1-203ENST00000458591 ERVW-1Q9UQF0 538 aa13.62□□□□□ -0.23
SCFD1-203ENST00000458591 LYVE1Q9Y5Y7 322 aa13.62□□□□□ -0.23
SCFD1-203ENST00000458591 SCN5AQ14524 2016 aa13.62□□□□□ -0.23
SCFD1-203ENST00000458591 PLXNB3Q9ULL4 1909 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 A0A1W2PRU2 124 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 FADS2P1A8MWK0 482 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 FAM227AF5H4B4 570 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 AOC2O75106 756 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 MYO1DO94832 1006 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 PTHP01270 115 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 HSMCR30P0CW71 290 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 SERPINB1P30740 379 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 HNMTP50135 292 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 ATN1P54259 1190 aaPredicted RBP13.61□□□□□ -0.23
SCFD1-203ENST00000458591 RPS13P62277 151 aaKnown RBP13.61□□□□□ -0.23
SCFD1-203ENST00000458591 SNRPD1P62314 119 aaKnown RBP13.61□□□□□ -0.23
SCFD1-203ENST00000458591 TIGD6Q17RP2 521 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 EXOC3L2Q2M3D2 409 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 AGTRAPQ6RW13 159 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 MMP21Q8N119 569 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 PGBD3Q8N328 593 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 CLIP4Q8N3C7 705 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 OR4A15Q8NGL6 344 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 HRASLS5Q96KN8 279 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 CENPOQ9BU64 300 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 ROGDIQ9GZN7 287 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 SPATA6Q9NWH7 488 aaPredicted RBP13.61□□□□□ -0.23
SCFD1-203ENST00000458591 POU2F3Q9UKI9 436 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 MYOFQ9NZM1 2061 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 GNG14A0A1W2PPG7 69 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 TSPAN6O43657 245 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 TLL1O43897 1013 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 MRPS14O60783 128 aaKnown RBP13.61□□□□□ -0.23
SCFD1-203ENST00000458591 SLC16A8O95907 504 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 EIF2DP41214 584 aaKnown RBP13.61□□□□□ -0.23
SCFD1-203ENST00000458591 PPP3CCP48454 512 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 CSNK1DP48730 415 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 NKX2-5P52952 324 aaPredicted RBP13.61□□□□□ -0.23
SCFD1-203ENST00000458591 EPHB3P54753 998 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 TPTEP56180 551 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 GANABQ14697 944 aaKnown RBP13.61□□□□□ -0.23
SCFD1-203ENST00000458591 BCL2A1Q16548 175 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 C1QTNF12Q5T7M4 302 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 UBE2UQ5VVX9 321 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 TMEM25Q86YD3 366 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 LYSMD2Q8IV50 215 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 HUS1BQ8NHY5 278 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 FIBINQ8TAL6 211 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 GTPBP3Q969Y2 492 aaKnown RBP13.61□□□□□ -0.23
SCFD1-203ENST00000458591 C11orf24Q96F05 449 aaPredicted RBP13.61□□□□□ -0.23
SCFD1-203ENST00000458591 Q96MT0 163 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 NRTNQ99748 197 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 CORO1BQ9BR76 489 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 MRPL17Q9NRX2 175 aaKnown RBP13.61□□□□□ -0.23
SCFD1-203ENST00000458591 ANKMY1Q9P2S6 941 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 PSORS1C1Q9UIG5 152 aa13.61□□□□□ -0.23
SCFD1-203ENST00000458591 E9PQ18 207 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 PCDH17O14917 1159 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 C6orf47O95873 294 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 SOD2P04179 222 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 GSTT2P0CG29 244 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 GSTT2BP0CG30 244 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 MVDP53602 400 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 HBA1P69905 142 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 SP3Q02447 781 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 SELENBP1Q13228 472 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 PPIGQ13427 754 aaKnown RBP eCLIP13.6□□□□□ -0.237e-8■■□□□ 12.4
SCFD1-203ENST00000458591 STEAP3Q658P3 488 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 ERICH5Q6P6B1 374 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 TCAIMQ8N3R3 496 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 ZNF366Q8N895 744 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 OR10G2Q8NGC3 310 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 NFKBIDQ8NI38 313 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 MCCC1Q96RQ3 725 aaPredicted RBP13.6□□□□□ -0.23
SCFD1-203ENST00000458591 DOHHQ9BU89 302 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 RIOK2Q9BVS4 552 aaKnown RBP13.6□□□□□ -0.23
SCFD1-203ENST00000458591 FAM120CQ9NX05 1096 aaKnown RBP13.6□□□□□ -0.23
SCFD1-203ENST00000458591 STOX2Q9P2F5 926 aaPredicted RBP13.6□□□□□ -0.23
SCFD1-203ENST00000458591 RUVBL1Q9Y265 456 aaKnown RBP13.6□□□□□ -0.23
SCFD1-203ENST00000458591 MAP4K5Q9Y4K4 846 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 METTL15A6NJ78 407 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 KCNK2O95069 426 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 OLFM2O95897 454 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 INHAP05111 366 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 MPC1LP0DKB6 136 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 RCVRNP35243 200 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 PCYT1AP49585 367 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 PPP5CP53041 499 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 SPIBQ01892 262 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 SPATC1Q76KD6 591 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 LSRQ86X29 649 aaPredicted RBP13.6□□□□□ -0.23
SCFD1-203ENST00000458591 NPAS3Q8IXF0 933 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 FAM217AQ8IXS0 508 aa13.6□□□□□ -0.23
SCFD1-203ENST00000458591 SYTL1Q8IYJ3 562 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms