RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 RAB8AP61006 207 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 FAM53BQ14153 422 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 PDK4Q16654 411 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 FAM153CQ494X1 144 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 DEFB134Q4QY38 66 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 XKR6Q5GH73 641 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 TOR1AIP1Q5JTV8 583 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 IRAK1BP1Q5VVH5 260 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 KLC3Q6P597 504 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 ATG14Q6ZNE5 492 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 RELL1Q8IUW5 271 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 ZC3H7AQ8IWR0 971 aaKnown RBP17.71■□□□□ 0.43
USP39-209ENST00000458268 CENPLQ8N0S6 344 aaPredicted RBP17.71■□□□□ 0.43
USP39-209ENST00000458268 SHISA5Q8N114 240 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 GALNT16Q8N428 558 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 ANKRD53Q8N9V6 530 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 OR4K1Q8NGD4 311 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 OR51Q1Q8NH59 317 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 SLC44A1Q8WWI5 657 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 TM4SF19Q96DZ7 209 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 ATP13A2Q9NQ11 1180 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 C14orf105Q9NVL8 296 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 LUZP4Q9P127 313 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 ZFP69BQ9UJL9 534 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 ANGPTL3Q9Y5C1 460 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 ZNF462Q96JM2 2506 aa17.71■□□□□ 0.43
USP39-209ENST00000458268 A0A0G2JN53 185 aa17.7■□□□□ 0.42
USP39-209ENST00000458268 TRIM49D1C9J1S8 452 aa17.7■□□□□ 0.42
USP39-209ENST00000458268 KERAO60938 352 aa17.7■□□□□ 0.42
USP39-209ENST00000458268 CDC123O75794 336 aaPredicted RBP17.7■□□□□ 0.42
USP39-209ENST00000458268 KRT38O76015 456 aa17.7■□□□□ 0.42
USP39-209ENST00000458268 IPO13O94829 963 aaKnown RBP17.7■□□□□ 0.42
USP39-209ENST00000458268 ALDOAP04075 364 aaKnown RBP17.7■□□□□ 0.42
USP39-209ENST00000458268 KLRB1Q12918 225 aa17.7■□□□□ 0.42
USP39-209ENST00000458268 KIRREL2Q6UWL6 708 aa17.7■□□□□ 0.42
USP39-209ENST00000458268 SLCO4C1Q6ZQN7 724 aa17.7■□□□□ 0.42
USP39-209ENST00000458268 ISCA2Q86U28 154 aa17.7■□□□□ 0.42
USP39-209ENST00000458268 PDSS2Q86YH6 399 aa17.7■□□□□ 0.42
USP39-209ENST00000458268 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.7■□□□□ 0.42
USP39-209ENST00000458268 KRT78Q8N1N4 520 aa17.7■□□□□ 0.42
USP39-209ENST00000458268 ARHGEF39Q8N4T4 335 aa17.7■□□□□ 0.42
USP39-209ENST00000458268 PDPRQ8NCN5 879 aa17.7■□□□□ 0.42
USP39-209ENST00000458268 OR5T3Q8NGG3 340 aa17.7■□□□□ 0.42
USP39-209ENST00000458268 PEX11GQ96HA9 241 aa17.7■□□□□ 0.42
USP39-209ENST00000458268 VPS50Q96JG6 964 aa17.7■□□□□ 0.42
USP39-209ENST00000458268 RHBGQ9H310 441 aa17.7■□□□□ 0.42
USP39-209ENST00000458268 ZNF160Q9HCG1 818 aa17.7■□□□□ 0.42
USP39-209ENST00000458268 ASB1Q9Y576 335 aa17.7■□□□□ 0.42
USP39-209ENST00000458268 OR2W5A6NFC9 320 aa17.69■□□□□ 0.42
USP39-209ENST00000458268 H0YIG0 161 aa17.69■□□□□ 0.42
USP39-209ENST00000458268 J3QKU1 62 aa17.69■□□□□ 0.42
USP39-209ENST00000458268 ARL1P40616 181 aaPredicted RBP17.69■□□□□ 0.42
USP39-209ENST00000458268 SERPINB9P50453 376 aa17.69■□□□□ 0.42
USP39-209ENST00000458268 HERC3Q15034 1050 aa17.69■□□□□ 0.42
USP39-209ENST00000458268 ABHD13Q7L211 337 aa17.69■□□□□ 0.42
USP39-209ENST00000458268 MYLK4Q86YV6 388 aaPredicted RBP17.69■□□□□ 0.42
USP39-209ENST00000458268 OR11G2Q8NGC1 345 aa17.69■□□□□ 0.42
USP39-209ENST00000458268 ATOH8Q96SQ7 321 aa17.69■□□□□ 0.42
USP39-209ENST00000458268 CD244Q9BZW8 370 aa17.69■□□□□ 0.42
USP39-209ENST00000458268 KLHL31Q9H511 634 aa17.69■□□□□ 0.42
USP39-209ENST00000458268 ZNF358Q9NW07 568 aa17.69■□□□□ 0.42
USP39-209ENST00000458268 OPTCQ9UBM4 332 aa17.69■□□□□ 0.42
USP39-209ENST00000458268 PTBP2Q9UKA9 531 aaKnown RBP17.69■□□□□ 0.42
USP39-209ENST00000458268 ZNF451Q9Y4E5 1061 aa17.69■□□□□ 0.42
USP39-209ENST00000458268 PCDHGA9Q9Y5G4 932 aaKnown RBP17.69■□□□□ 0.42
USP39-209ENST00000458268 CFAP46Q8IYW2 2715 aa17.69■□□□□ 0.42
USP39-209ENST00000458268 IGLV3-12A0A075B6K2 115 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 NSG1A0A0A6YYJ2 146 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 ANKDD1BA6NHY2 528 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 SYCE1LA8MT33 242 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 SUV39H1O43463 412 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 SH3BGRLO75368 114 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 KLHL2O95198 593 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 ALOX12P18054 663 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 AHRP35869 848 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 IRF8Q02556 426 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 TLE1Q04724 770 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 AIMP2Q13155 320 aaKnown RBP17.68■□□□□ 0.42
USP39-209ENST00000458268 CHIT1Q13231 466 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 PWP1Q13610 501 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 DOC2AQ14183 400 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 PFKFB4Q16877 469 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 NADK2Q4G0N4 442 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 ATG9BQ674R7 924 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 TMIGD1Q6UXZ0 262 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 LRRC70Q7Z2Q7 622 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 PLD6Q8N2A8 252 aaKnown RBP17.68■□□□□ 0.42
USP39-209ENST00000458268 TRPV3Q8NET8 790 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 NT5CQ8TCD5 201 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 DCAKDQ8WVC6 231 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 METTL21AQ8WXB1 218 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 DOCK10Q96BY6 2186 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 THOC3Q96J01 351 aaKnown RBP17.68■□□□□ 0.42
USP39-209ENST00000458268 MAGEB10Q96LZ2 347 aaPredicted RBP17.68■□□□□ 0.42
USP39-209ENST00000458268 CAPS2Q9BXY5 557 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 EPN3Q9H201 632 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 MAP10Q9P2G4 905 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 ANAPC2Q9UJX6 822 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 BOD1L1Q8NFC6 3051 aa17.68■□□□□ 0.42
USP39-209ENST00000458268 FASNP49327 2511 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms