RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 RMND5BQ96G75 393 aaPredicted RBP12.38□□□□□ -0.43
SNHG17-208ENST00000456953 SEC16BQ96JE7 1060 aa12.38□□□□□ -0.43
SNHG17-208ENST00000456953 LIME1Q9H400 295 aa12.38□□□□□ -0.43
SNHG17-208ENST00000456953 MRPS30Q9NP92 439 aaKnown RBP12.38□□□□□ -0.43
SNHG17-208ENST00000456953 RAB6BQ9NRW1 208 aa12.38□□□□□ -0.43
SNHG17-208ENST00000456953 ZNF358Q9NW07 568 aa12.38□□□□□ -0.43
SNHG17-208ENST00000456953 FN1P02751 2386 aaKnown RBP12.38□□□□□ -0.43
SNHG17-208ENST00000456953 IGKV1-8A0A0C4DH67 115 aa12.37□□□□□ -0.43
SNHG17-208ENST00000456953 PROM1O43490 865 aa12.37□□□□□ -0.43
SNHG17-208ENST00000456953 RAD51CO43502 376 aa12.37□□□□□ -0.43
SNHG17-208ENST00000456953 PRMT3O60678 531 aa12.37□□□□□ -0.43
SNHG17-208ENST00000456953 METTL18O95568 372 aa12.37□□□□□ -0.43
SNHG17-208ENST00000456953 GOT2P00505 430 aaKnown RBP12.37□□□□□ -0.43
SNHG17-208ENST00000456953 FDFT1P37268 417 aa12.37□□□□□ -0.43
SNHG17-208ENST00000456953 CYB561P49447 251 aa12.37□□□□□ -0.43
SNHG17-208ENST00000456953 BASP1P80723 227 aaKnown RBP12.37□□□□□ -0.43
SNHG17-208ENST00000456953 PMPCAQ10713 525 aa12.37□□□□□ -0.43
SNHG17-208ENST00000456953 KCTD19Q17RG1 926 aaPredicted RBP12.37□□□□□ -0.43
SNHG17-208ENST00000456953 CCDC38Q502W7 563 aa12.37□□□□□ -0.43
SNHG17-208ENST00000456953 ZNF468Q5VIY5 522 aaPredicted RBP12.37□□□□□ -0.43
SNHG17-208ENST00000456953 ZNF425Q6IV72 752 aa12.37□□□□□ -0.43
SNHG17-208ENST00000456953 PAPD4Q6PIY7 484 aaKnown RBP12.37□□□□□ -0.43
SNHG17-208ENST00000456953 KRT222Q8N1A0 295 aa12.37□□□□□ -0.43
SNHG17-208ENST00000456953 MMGT1Q8N4V1 131 aa12.37□□□□□ -0.43
SNHG17-208ENST00000456953 NOA1Q8NC60 698 aaKnown RBP12.37□□□□□ -0.43
SNHG17-208ENST00000456953 OR9A4Q8NGU2 314 aa12.37□□□□□ -0.43
SNHG17-208ENST00000456953 OR4L1Q8NH43 312 aa12.37□□□□□ -0.43
SNHG17-208ENST00000456953 TMEM125Q96AQ2 219 aa12.37□□□□□ -0.43
SNHG17-208ENST00000456953 MBD6Q96DN6 1003 aa12.37□□□□□ -0.43
SNHG17-208ENST00000456953 FOPNLQ96NB1 174 aa12.37□□□□□ -0.43
SNHG17-208ENST00000456953 CLEC4MQ9H2X3 399 aaPredicted RBP12.37□□□□□ -0.43
SNHG17-208ENST00000456953 TRIM45Q9H8W5 580 aaPredicted RBP12.37□□□□□ -0.43
SNHG17-208ENST00000456953 RRAGDQ9NQL2 400 aaPredicted RBP12.37□□□□□ -0.43
SNHG17-208ENST00000456953 PIH1D1Q9NWS0 290 aaKnown RBP12.37□□□□□ -0.43
SNHG17-208ENST00000456953 UTP11Q9Y3A2 253 aaKnown RBP12.37□□□□□ -0.43
SNHG17-208ENST00000456953 L3MBTL1Q9Y468 752 aa12.37□□□□□ -0.43
SNHG17-208ENST00000456953 NFS1Q9Y697 457 aa12.37□□□□□ -0.43
SNHG17-208ENST00000456953 HEATR5BQ9P2D3 2071 aa12.37□□□□□ -0.43
SNHG17-208ENST00000456953 NDC80O14777 642 aa12.36□□□□□ -0.43
SNHG17-208ENST00000456953 KPNA5O15131 536 aa12.36□□□□□ -0.43
SNHG17-208ENST00000456953 P2RX6O15547 441 aa12.36□□□□□ -0.43
SNHG17-208ENST00000456953 PSMD3O43242 534 aa12.36□□□□□ -0.43
SNHG17-208ENST00000456953 CDC40O60508 579 aaKnown RBP eCLIP12.36□□□□□ -0.436e-12■■■□□ 17.8
SNHG17-208ENST00000456953 SLU7O95391 586 aaKnown RBP12.36□□□□□ -0.43
SNHG17-208ENST00000456953 NSA2O95478 260 aaKnown RBP12.36□□□□□ -0.43
SNHG17-208ENST00000456953 ERGP11308 486 aa12.36□□□□□ -0.43
SNHG17-208ENST00000456953 TFEBP19484 476 aa12.36□□□□□ -0.43
SNHG17-208ENST00000456953 RPA3P35244 121 aaPredicted RBP12.36□□□□□ -0.43
SNHG17-208ENST00000456953 XCR1P46094 333 aa12.36□□□□□ -0.43
SNHG17-208ENST00000456953 DGKQP52824 942 aa12.36□□□□□ -0.43
SNHG17-208ENST00000456953 TERF1P54274 439 aa12.36□□□□□ -0.43
SNHG17-208ENST00000456953 CMPK2Q5EBM0 449 aa12.36□□□□□ -0.43
SNHG17-208ENST00000456953 AARS2Q5JTZ9 985 aaKnown RBP12.36□□□□□ -0.43
SNHG17-208ENST00000456953 ARHGAP11AQ6P4F7 1023 aa12.36□□□□□ -0.43
SNHG17-208ENST00000456953 OTOAQ7RTW8 1153 aa12.36□□□□□ -0.43
SNHG17-208ENST00000456953 CAMKMTQ7Z624 323 aa12.36□□□□□ -0.43
SNHG17-208ENST00000456953 PCGF5Q86SE9 256 aa12.36□□□□□ -0.43
SNHG17-208ENST00000456953 RPS19BP1Q86WX3 136 aaKnown RBP12.36□□□□□ -0.43
SNHG17-208ENST00000456953 OR51Q1Q8NH59 317 aa12.36□□□□□ -0.43
SNHG17-208ENST00000456953 MCOLN3Q8TDD5 553 aa12.36□□□□□ -0.43
SNHG17-208ENST00000456953 SMPDL3AQ92484 453 aa12.36□□□□□ -0.43
SNHG17-208ENST00000456953 PANX3Q96QZ0 392 aa12.36□□□□□ -0.43
SNHG17-208ENST00000456953 LPAR4Q99677 370 aa12.36□□□□□ -0.43
SNHG17-208ENST00000456953 LRRC1Q9BTT6 524 aa12.36□□□□□ -0.43
SNHG17-208ENST00000456953 TRIM31Q9BZY9 425 aa12.36□□□□□ -0.43
SNHG17-208ENST00000456953 RAB17Q9H0T7 212 aa12.36□□□□□ -0.43
SNHG17-208ENST00000456953 CDCP1Q9H5V8 836 aa12.36□□□□□ -0.43
SNHG17-208ENST00000456953 ETNK1Q9HBU6 452 aa12.36□□□□□ -0.43
SNHG17-208ENST00000456953 PLSCR2Q9NRY7 297 aa12.36□□□□□ -0.43
SNHG17-208ENST00000456953 RUVBL2Q9Y230 463 aaKnown RBP12.36□□□□□ -0.43
SNHG17-208ENST00000456953 PLEKHA6Q9Y2H5 1048 aa12.36□□□□□ -0.43
SNHG17-208ENST00000456953 KLF13Q9Y2Y9 288 aaPredicted RBP12.36□□□□□ -0.43
SNHG17-208ENST00000456953 PHF3Q92576 2039 aaKnown RBP12.35□□□□□ -0.43
SNHG17-208ENST00000456953 FBN1P35555 2871 aaKnown RBP12.35□□□□□ -0.43
SNHG17-208ENST00000456953 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.35□□□□□ -0.43
SNHG17-208ENST00000456953 OR2W5A6NFC9 320 aa12.35□□□□□ -0.43
SNHG17-208ENST00000456953 EFCAB8A8MWE9 144 aa12.35□□□□□ -0.43
SNHG17-208ENST00000456953 KLRC4-KLRK1H3BQV0 150 aa12.35□□□□□ -0.43
SNHG17-208ENST00000456953 PRMT5O14744 637 aaPredicted RBP12.35□□□□□ -0.43
SNHG17-208ENST00000456953 CCNDBP1O95273 360 aa12.35□□□□□ -0.43
SNHG17-208ENST00000456953 APRTP07741 180 aa12.35□□□□□ -0.43
SNHG17-208ENST00000456953 TPP2P29144 1249 aaPredicted RBP12.35□□□□□ -0.43
SNHG17-208ENST00000456953 TRHRP34981 398 aaPredicted RBP12.35□□□□□ -0.43
SNHG17-208ENST00000456953 MEOX1P50221 254 aa12.35□□□□□ -0.43
SNHG17-208ENST00000456953 NUP107P57740 925 aa12.35□□□□□ -0.43
SNHG17-208ENST00000456953 SLC7A5Q01650 507 aa12.35□□□□□ -0.43
SNHG17-208ENST00000456953 PRDX1Q06830 199 aaKnown RBP12.35□□□□□ -0.43
SNHG17-208ENST00000456953 ACTN3Q08043 901 aaPredicted RBP12.35□□□□□ -0.43
SNHG17-208ENST00000456953 SEMA3AQ14563 771 aa12.35□□□□□ -0.43
SNHG17-208ENST00000456953 USP10Q14694 798 aaKnown RBP12.35□□□□□ -0.43
SNHG17-208ENST00000456953 ABRAXAS2Q15018 415 aa12.35□□□□□ -0.43
SNHG17-208ENST00000456953 NSDHLQ15738 373 aa12.35□□□□□ -0.43
SNHG17-208ENST00000456953 GLE1Q53GS7 698 aaKnown RBP12.35□□□□□ -0.43
SNHG17-208ENST00000456953 FASTKD1Q53R41 847 aaKnown RBP12.35□□□□□ -0.43
SNHG17-208ENST00000456953 SFT2D3Q587I9 215 aa12.35□□□□□ -0.43
SNHG17-208ENST00000456953 TEX35Q5T0J7 233 aa12.35□□□□□ -0.43
SNHG17-208ENST00000456953 PTRHD1Q6GMV3 140 aaKnown RBP12.35□□□□□ -0.43
SNHG17-208ENST00000456953 Q71RC1 249 aaPredicted RBP12.35□□□□□ -0.43
SNHG17-208ENST00000456953 ZNF534Q76KX8 674 aa12.35□□□□□ -0.43
SNHG17-208ENST00000456953 ZNF227Q86WZ6 799 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms