RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 CATSPEREQ5SY80 951 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 ZNF697Q5TEC3 545 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 ZNF765Q7L2R6 523 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 TMPRSS11BQ86T26 416 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 LRRC56Q8IYG6 542 aaPredicted RBP17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 GPR156Q8NFN8 814 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 BPIFB6Q8NFQ5 453 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 CHPT1Q8WUD6 406 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 TRUB1Q8WWH5 349 aaKnown RBP17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 MUL1Q969V5 352 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 NXPE3Q969Y0 559 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 REPS1Q96D71 796 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 RSPRY1Q96DX4 576 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 RAD9AQ99638 391 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 GPN2Q9H9Y4 310 aaPredicted RBP17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 CORO2BQ9UQ03 480 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 LRRK1Q38SD2 2015 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 CDH23Q9H251 3354 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 MGAT4DA6NG13 374 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 MYO1GB0I1T2 1018 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 K7ESM1 405 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 FOXE1O00358 373 aaPredicted RBP17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 RNASET2O00584 256 aaKnown RBP17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 DPM1O60762 260 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 ZNF8P17098 575 aaPredicted RBP17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 ITIH1P19827 911 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 MESP2Q0VG99 397 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 KEAP1Q14145 624 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 RGNQ15493 299 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 PDE12Q6L8Q7 609 aaKnown RBP17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 LAS2Q8IYD9 372 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 CELF5Q8N6W0 485 aaKnown RBP17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 ZNF707Q96C28 371 aaPredicted RBP17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 CXorf40BQ96DE9 158 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 C7orf34Q96L11 122 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 OR2AG1Q9H205 316 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 PCDHGA4Q9Y5G9 962 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 CORINQ9Y5Q5 1042 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 AP1M2Q9Y6Q5 423 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 HSPE1-MOB4S4R3N1 261 aa17.68■□□□□ 0.42
SEMA3B-209ENST00000456560 TMEM229AB2RXF0 380 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 PCDH7O60245 1069 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 SERPINB7O75635 380 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 PAPLNO95428 1278 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 PCMT1P22061 227 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 ITGB7P26010 798 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 MAGEA10P43363 369 aaPredicted RBP17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 ITGA1P56199 1179 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 CAMK1Q14012 370 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 ZNF385BQ569K4 471 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 SYTL1Q8IYJ3 562 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 SETD9Q8NE22 299 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 TMIEQ8NEW7 156 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 CNIH3Q8TBE1 160 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 RAB2BQ8WUD1 216 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 FKBP10Q96AY3 582 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 NODALQ96S42 347 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 CSF3RQ99062 836 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 EFCAB11Q9BUY7 163 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 ASPSCR1Q9BZE9 553 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 PDP1Q9P0J1 537 aaPredicted RBP17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 VPS4AQ9UN37 437 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 PCM1Q15154 2024 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 PRRT4C9JH25 899 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 ZNF197O14709 1029 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 JRKO75564 520 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 SULT1C4O75897 302 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 C1GALT1C1LP0DN25 315 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 IL5RAQ01344 420 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 LRRC74AQ0VAA2 488 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 SIM2Q14190 667 aaPredicted RBP17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 SLBPQ14493 270 aaKnown RBP eCLIP17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 RGS21Q2M5E4 152 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 C10orf62Q5T681 223 aaPredicted RBP17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 C9orf64Q5T6V5 341 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 ARMCX6Q7L4S7 300 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 ETFBKMTQ8IXQ9 262 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 OR9A1PQ8NGU1 263 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 GOT1L1Q8NHS2 421 aaPredicted RBP17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 BHLHE41Q9C0J9 482 aaPredicted RBP17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 RIBC2Q9H4K1 309 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 INIPQ9NRY2 104 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 BAG5Q9UL15 447 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 PSME2Q9UL46 239 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 DYRK1BQ9Y463 629 aa17.67■□□□□ 0.42
SEMA3B-209ENST00000456560 CEP290O15078 2479 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 GNG14A0A1W2PPG7 69 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 GCM2O75603 506 aaPredicted RBP17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 DNAJB5O75953 348 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 CLPXO76031 633 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 FKBP9O95302 570 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 PCGF2P35227 344 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 MVDP53602 400 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 KCNJ10P78508 379 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 ITGADQ13349 1161 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 PPIGQ13427 754 aaKnown RBP eCLIP17.66■□□□□ 0.423e-11■■□□□ 12.8
SEMA3B-209ENST00000456560 EGFLAMQ63HQ2 1017 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 NIPAL1Q6NVV3 410 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 HORMAD1Q86X24 394 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 NAGSQ8N159 534 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms