RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 MACROD1Q9BQ69 325 aa16.89■□□□□ 0.29
MSH6-207ENST00000456246 CAPS2Q9BXY5 557 aa16.89■□□□□ 0.29
MSH6-207ENST00000456246 CNOT10Q9H9A5 744 aaKnown RBP16.89■□□□□ 0.29
MSH6-207ENST00000456246 HCN3Q9P1Z3 774 aa16.89■□□□□ 0.29
MSH6-207ENST00000456246 SLC22A14Q9Y267 594 aa16.89■□□□□ 0.29
MSH6-207ENST00000456246 NAALAD2Q9Y3Q0 740 aa16.89■□□□□ 0.29
MSH6-207ENST00000456246 COPG1Q9Y678 874 aaKnown RBP16.89■□□□□ 0.29
MSH6-207ENST00000456246 SPTAN1Q13813 2472 aaKnown RBP16.88■□□□□ 0.29
MSH6-207ENST00000456246 DYTNA2CJ06 578 aa16.88■□□□□ 0.29
MSH6-207ENST00000456246 TCP11X1B4DZS4 312 aa16.88■□□□□ 0.29
MSH6-207ENST00000456246 WFS1O76024 890 aa16.88■□□□□ 0.29
MSH6-207ENST00000456246 ALOX12P18054 663 aa16.88■□□□□ 0.29
MSH6-207ENST00000456246 GNAZP19086 355 aa16.88■□□□□ 0.29
MSH6-207ENST00000456246 GSTM2P28161 218 aa16.88■□□□□ 0.29
MSH6-207ENST00000456246 SPRP35270 261 aaPredicted RBP16.88■□□□□ 0.29
MSH6-207ENST00000456246 SOX11P35716 441 aa16.88■□□□□ 0.29
MSH6-207ENST00000456246 GLRBP48167 497 aa16.88■□□□□ 0.29
MSH6-207ENST00000456246 MEF2AQ02078 507 aaPredicted RBP16.88■□□□□ 0.29
MSH6-207ENST00000456246 NAB1Q13506 487 aa16.88■□□□□ 0.29
MSH6-207ENST00000456246 PCOLCEQ15113 449 aa16.88■□□□□ 0.29
MSH6-207ENST00000456246 FAAH2Q6GMR7 532 aa16.88■□□□□ 0.29
MSH6-207ENST00000456246 C17orf53Q8N3J3 647 aaPredicted RBP16.88■□□□□ 0.29
MSH6-207ENST00000456246 CISD2Q8N5K1 135 aaKnown RBP16.88■□□□□ 0.29
MSH6-207ENST00000456246 TTLQ8NG68 377 aa16.88■□□□□ 0.29
MSH6-207ENST00000456246 FBXO25Q8TCJ0 367 aa16.88■□□□□ 0.29
MSH6-207ENST00000456246 SEC16BQ96JE7 1060 aa16.88■□□□□ 0.29
MSH6-207ENST00000456246 TSNARE1Q96NA8 513 aa16.88■□□□□ 0.29
MSH6-207ENST00000456246 CYTH2Q99418 400 aa16.88■□□□□ 0.29
MSH6-207ENST00000456246 BARD1Q99728 777 aaKnown RBP16.88■□□□□ 0.29
MSH6-207ENST00000456246 MESP1Q9BRJ9 268 aa16.88■□□□□ 0.29
MSH6-207ENST00000456246 PITHD1Q9GZP4 211 aaPredicted RBP16.88■□□□□ 0.29
MSH6-207ENST00000456246 ASF1BQ9NVP2 202 aa16.88■□□□□ 0.29
MSH6-207ENST00000456246 TEKT2Q9UIF3 430 aa16.88■□□□□ 0.29
MSH6-207ENST00000456246 MTO1Q9Y2Z2 717 aaKnown RBP16.88■□□□□ 0.29
MSH6-207ENST00000456246 SPTBN1Q01082 2364 aaKnown RBP16.87■□□□□ 0.29
MSH6-207ENST00000456246 CXorf49A8MYA2 514 aaPredicted RBP16.87■□□□□ 0.29
MSH6-207ENST00000456246 GALR3O60755 368 aaPredicted RBP16.87■□□□□ 0.29
MSH6-207ENST00000456246 RDH16O75452 317 aa16.87■□□□□ 0.29
MSH6-207ENST00000456246 WISP3O95389 354 aaPredicted RBP16.87■□□□□ 0.29
MSH6-207ENST00000456246 SERPIND1P05546 499 aa16.87■□□□□ 0.29
MSH6-207ENST00000456246 JAK1P23458 1154 aa16.87■□□□□ 0.29
MSH6-207ENST00000456246 SNRPNP63162 240 aaKnown RBP16.87■□□□□ 0.29
MSH6-207ENST00000456246 ARG2P78540 354 aa16.87■□□□□ 0.29
MSH6-207ENST00000456246 TGFBIQ15582 683 aa16.87■□□□□ 0.29
MSH6-207ENST00000456246 ZKSCAN8Q15776 578 aaPredicted RBP16.87■□□□□ 0.29
MSH6-207ENST00000456246 GRTP1Q5TC63 336 aa16.87■□□□□ 0.29
MSH6-207ENST00000456246 LINC00696Q6ZRV3 163 aa16.87■□□□□ 0.29
MSH6-207ENST00000456246 CPEB2Q7Z5Q1 589 aaKnown RBP16.87■□□□□ 0.29
MSH6-207ENST00000456246 PDSS2Q86YH6 399 aa16.87■□□□□ 0.29
MSH6-207ENST00000456246 CTAGE3PQ8IX95 158 aa16.87■□□□□ 0.29
MSH6-207ENST00000456246 ZNF740Q8NDX6 193 aa16.87■□□□□ 0.29
MSH6-207ENST00000456246 BRIX1Q8TDN6 353 aaKnown RBP16.87■□□□□ 0.29
MSH6-207ENST00000456246 PSMF1Q92530 271 aa16.87■□□□□ 0.29
MSH6-207ENST00000456246 RHBDF1Q96CC6 855 aa16.87■□□□□ 0.29
MSH6-207ENST00000456246 CNDP1Q96KN2 507 aa16.87■□□□□ 0.29
MSH6-207ENST00000456246 IMMP1LQ96LU5 166 aa16.87■□□□□ 0.29
MSH6-207ENST00000456246 RNF32Q9H0A6 362 aa16.87■□□□□ 0.29
MSH6-207ENST00000456246 GPRC5BQ9NZH0 403 aa16.87■□□□□ 0.29
MSH6-207ENST00000456246 PTGFRNQ9P2B2 879 aa16.87■□□□□ 0.29
MSH6-207ENST00000456246 USP9YO00507 2555 aaPredicted RBP16.87■□□□□ 0.29
MSH6-207ENST00000456246 COL12A1Q99715 3063 aa16.86■□□□□ 0.29
MSH6-207ENST00000456246 H2AFYO75367 372 aaKnown RBP16.86■□□□□ 0.29
MSH6-207ENST00000456246 JRKO75564 520 aa16.86■□□□□ 0.29
MSH6-207ENST00000456246 WDR47O94967 919 aa16.86■□□□□ 0.29
MSH6-207ENST00000456246 AGFG2O95081 481 aa16.86■□□□□ 0.29
MSH6-207ENST00000456246 CCDC166P0CW27 439 aa16.86■□□□□ 0.29
MSH6-207ENST00000456246 MYBL2P10244 700 aa16.86■□□□□ 0.29
MSH6-207ENST00000456246 HPDP32754 393 aaPredicted RBP16.86■□□□□ 0.29
MSH6-207ENST00000456246 MAGEA4P43358 317 aa16.86■□□□□ 0.29
MSH6-207ENST00000456246 SLC6A12P48065 614 aa16.86■□□□□ 0.29
MSH6-207ENST00000456246 GPX6P59796 221 aa16.86■□□□□ 0.29
MSH6-207ENST00000456246 RAB10P61026 200 aa16.86■□□□□ 0.29
MSH6-207ENST00000456246 SRSF1Q07955 248 aaKnown RBP eCLIP16.86■□□□□ 0.29
MSH6-207ENST00000456246 INAQ16352 499 aa16.86■□□□□ 0.29
MSH6-207ENST00000456246 EXT1Q16394 746 aa16.86■□□□□ 0.29
MSH6-207ENST00000456246 PLAG1Q6DJT9 500 aa16.86■□□□□ 0.29
MSH6-207ENST00000456246 C8orf74Q6P047 294 aa16.86■□□□□ 0.29
MSH6-207ENST00000456246 RPUSD3Q6P087 351 aaKnown RBP16.86■□□□□ 0.29
MSH6-207ENST00000456246 CCDC25Q86WR0 208 aa16.86■□□□□ 0.29
MSH6-207ENST00000456246 GPSM1Q86YR5 675 aa16.86■□□□□ 0.29
MSH6-207ENST00000456246 PLPP5Q8NEB5 264 aa16.86■□□□□ 0.29
MSH6-207ENST00000456246 SLC6A16Q9GZN6 736 aa16.86■□□□□ 0.29
MSH6-207ENST00000456246 CSAG2Q9Y5P2 127 aa16.86■□□□□ 0.29
MSH6-207ENST00000456246 SCN3AQ9NY46 2000 aa16.86■□□□□ 0.29
MSH6-207ENST00000456246 HIVEP3Q5T1R4 2406 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 TRAV17A0A0B4J275 112 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 MAGEB17A8MXT2 336 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 PIAS1O75925 651 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 C1QAP02745 245 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 SERPINA6P08185 405 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 C1GALT1C1LP0DN25 315 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 GGT5P36269 586 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 EFNA3P52797 238 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 STXBP1P61764 594 aaKnown RBP16.85■□□□□ 0.29
MSH6-207ENST00000456246 CDC16Q13042 620 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 ELOAQ14241 798 aaKnown RBP16.85■□□□□ 0.29
MSH6-207ENST00000456246 RBBP5Q15291 538 aaKnown RBP16.85■□□□□ 0.29
MSH6-207ENST00000456246 KBTBD12Q3ZCT8 623 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 DEFB134Q4QY38 66 aa16.85■□□□□ 0.29
MSH6-207ENST00000456246 SULT1C3Q6IMI6 304 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms