RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 SIX3O95343 332 aaPredicted RBP13.95□□□□□ -0.18
VPS16-205ENST00000453689 ONECUT2O95948 504 aa13.95□□□□□ -0.18
VPS16-205ENST00000453689 RPS17P08708 135 aaKnown RBP13.95□□□□□ -0.18
VPS16-205ENST00000453689 FAM87AP0C7U9 286 aa13.95□□□□□ -0.18
VPS16-205ENST00000453689 PIK3CGP48736 1102 aa13.95□□□□□ -0.18
VPS16-205ENST00000453689 EMP3P54852 163 aa13.95□□□□□ -0.18
VPS16-205ENST00000453689 RPS15AP62244 130 aaKnown RBP13.95□□□□□ -0.18
VPS16-205ENST00000453689 HERVK_113P63132 956 aa13.95□□□□□ -0.18
VPS16-205ENST00000453689 PDK4Q16654 411 aa13.95□□□□□ -0.18
VPS16-205ENST00000453689 MUM1Q2TAK8 710 aa13.95□□□□□ -0.18
VPS16-205ENST00000453689 CATSPEREQ5SY80 951 aa13.95□□□□□ -0.18
VPS16-205ENST00000453689 MRPL14Q6P1L8 145 aaKnown RBP13.95□□□□□ -0.18
VPS16-205ENST00000453689 SNX31Q8N9S9 440 aa13.95□□□□□ -0.18
VPS16-205ENST00000453689 ABHD11Q8NFV4 315 aa13.95□□□□□ -0.18
VPS16-205ENST00000453689 OR4K1Q8NGD4 311 aa13.95□□□□□ -0.18
VPS16-205ENST00000453689 ADAMTS17Q8TE56 1095 aa13.95□□□□□ -0.18
VPS16-205ENST00000453689 SLC5A11Q8WWX8 675 aa13.95□□□□□ -0.18
VPS16-205ENST00000453689 NEIL2Q969S2 332 aa13.95□□□□□ -0.18
VPS16-205ENST00000453689 FKBP10Q96AY3 582 aa13.95□□□□□ -0.18
VPS16-205ENST00000453689 TMEM237Q96Q45 408 aa13.95□□□□□ -0.18
VPS16-205ENST00000453689 C1QTNF3Q9BXJ4 246 aa13.95□□□□□ -0.18
VPS16-205ENST00000453689 ERVK-6Q9BXR3 956 aa13.95□□□□□ -0.18
VPS16-205ENST00000453689 CAPS2Q9BXY5 557 aa13.95□□□□□ -0.18
VPS16-205ENST00000453689 SEMA4CQ9C0C4 833 aa13.95□□□□□ -0.18
VPS16-205ENST00000453689 MED4Q9NPJ6 270 aa13.95□□□□□ -0.18
VPS16-205ENST00000453689 PADI2Q9Y2J8 665 aa13.95□□□□□ -0.18
VPS16-205ENST00000453689 ANGPTL3Q9Y5C1 460 aa13.95□□□□□ -0.18
VPS16-205ENST00000453689 KCNMB2Q9Y691 235 aa13.95□□□□□ -0.18
VPS16-205ENST00000453689 KCNE1BA0A087WTH5 132 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 E2F3O00716 465 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 LCMT2O60294 686 aaKnown RBP13.94□□□□□ -0.18
VPS16-205ENST00000453689 STATHP02808 62 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 PRB1P04280 392 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 CD63P08962 238 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 PIM1P11309 404 aaPredicted RBP13.94□□□□□ -0.18
VPS16-205ENST00000453689 EPB42P16452 691 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 GNAZP19086 355 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 GRK3P35626 688 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 BCL6P41182 706 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 CCR10P46092 362 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 OR1D4P47884 311 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 CCR8P51685 355 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 POLE2P56282 527 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 DNAJB13P59910 316 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 MEF2AQ02078 507 aaPredicted RBP13.94□□□□□ -0.18
VPS16-205ENST00000453689 ASPHQ12797 758 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 MPP2Q14168 576 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 HSP90B2PQ58FF3 399 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 ZNF678Q5SXM1 525 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 LIPMQ5VYY2 423 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 OVCH1Q7RTY7 1134 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 GOLGA7Q7Z5G4 137 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 VN1R4Q7Z5H5 301 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 C10orf107Q8IVU9 208 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 TMEM151BQ8IW70 566 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 ARHGEF39Q8N4T4 335 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 TEX9Q8N6V9 391 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 ANKRD42Q8N9B4 389 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 ZNF483Q8TF39 744 aaPredicted RBP13.94□□□□□ -0.18
VPS16-205ENST00000453689 APOBEC4Q8WW27 367 aaKnown RBP13.94□□□□□ -0.18
VPS16-205ENST00000453689 THAP11Q96EK4 314 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 L3HYPDHQ96EM0 354 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 OXSMQ9NWU1 459 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 NKIRAS1Q9NYS0 192 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 PCTPQ9UKL6 214 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 MAN2B2Q9Y2E5 1009 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 PTRH2Q9Y3E5 179 aaKnown RBP13.94□□□□□ -0.18
VPS16-205ENST00000453689 MAU2Q9Y6X3 613 aa13.94□□□□□ -0.18
VPS16-205ENST00000453689 TXNDC9O14530 226 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 CLGNO14967 610 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 BPGMP07738 259 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 DHRS4L1P0CG22 281 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 EPORP19235 508 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 IMPDH1P20839 514 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 ALDH3A1P30838 453 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 HPDP32754 393 aaPredicted RBP13.93□□□□□ -0.18
VPS16-205ENST00000453689 FOLR3P41439 243 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 SERPINB4P48594 390 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 FOXL2P58012 376 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 NAA20P61599 178 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 SNRPNP63162 240 aaKnown RBP13.93□□□□□ -0.18
VPS16-205ENST00000453689 GTF2H2Q13888 395 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 GARNL3Q5VVW2 1013 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 GTF2H2CQ6P1K8 395 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 PRMT9Q6P2P2 845 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 NXPE4Q6UWF7 544 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 TMPRSS11BQ86T26 416 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 ZNF740Q8NDX6 193 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 OR2Y1Q8NGV0 311 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 SREK1Q8WXA9 508 aaKnown RBP13.93□□□□□ -0.18
VPS16-205ENST00000453689 THAP4Q8WY91 577 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 TM4SF19Q96DZ7 209 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 MECRQ9BV79 373 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 SARGQ9BW04 601 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 SPNS1Q9H2V7 528 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 PELI2Q9HAT8 420 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 ZNF304Q9HCX3 659 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 CTSFQ9UBX1 484 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 COL6A6A6NMZ7 2263 aa13.93□□□□□ -0.18
VPS16-205ENST00000453689 BSNQ9UPA5 3926 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms