RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 SORBS2O94875 1100 aaKnown RBP17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 BPGMP07738 259 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 MYL2P10916 166 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 ERGP11308 486 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 YBX1P67809 324 aaKnown RBP17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 OCA2Q04671 838 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 SP140Q13342 867 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 PCLAFQ15004 111 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 MUM1Q2TAK8 710 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 THEMIS2Q5TEJ8 643 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 SLC6A19Q695T7 634 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 RGS9BPQ6ZS82 235 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 COX15Q7KZN9 410 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 RNF44Q7L0R7 432 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 PIWIL4Q7Z3Z4 852 aaKnown RBP17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 ADCK2Q7Z695 626 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 TMEM151BQ8IW70 566 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 OR4N4Q8N0Y3 316 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 SPATA6LQ8N4H0 392 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 FAM26EQ8N5C1 309 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 RBMXL3Q8N7X1 1067 aaKnown RBP17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 RAB3IL1Q8TBN0 382 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 STAG3L4Q8TBR4 150 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 EEF1AKMT1Q8WVE0 214 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 SREK1Q8WXA9 508 aaKnown RBP17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 TM9SF4Q92544 642 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 PNPLA2Q96AD5 504 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 VPS50Q96JG6 964 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 MAGEB18Q96M61 343 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 SLC6A20Q9NP91 592 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 ENAMQ9NRM1 1142 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 ANKMY1Q9P2S6 941 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 CTSFQ9UBX1 484 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 TMCO1Q9UM00 188 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 MAP4K5Q9Y4K4 846 aa17.15■□□□□ 0.34
SQSTM1-204ENST00000453046 NPEPPSL1A6NEC2 478 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 MASP2O00187 686 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 H2AFYO75367 372 aaKnown RBP17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 IPO13O94829 963 aaKnown RBP17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 SLC16A8O95907 504 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 ONECUT2O95948 504 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 SBK3P0C264 359 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 CPA3P15088 417 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 TAC1P20366 129 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 ITGA3P26006 1051 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 PRKAA2P54646 552 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 GNGT1P63211 74 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 AIMP2Q13155 320 aaKnown RBP17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 OR4D1Q15615 310 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 INPP5JQ15735 1006 aaPredicted RBP17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 RBBP7Q16576 425 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 IRAK1BP1Q5VVH5 260 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 ICE2Q659A1 982 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 PRMT9Q6P2P2 845 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 FBXO42Q6P3S6 717 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 TMEM151AQ8N4L1 468 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 DTWD1Q8N5C7 304 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 GALNT11Q8NCW6 608 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 PPFIBP2Q8ND30 876 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 ASB11Q8WXH4 323 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 CCDC126Q96EE4 140 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 ATOH8Q96SQ7 321 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 SPSB2Q99619 263 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 PLCD4Q9BRC7 762 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 UNKQ9C0B0 810 aaKnown RBP17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 ZNF552Q9H707 407 aaPredicted RBP17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 STOX2Q9P2F5 926 aaPredicted RBP17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 FBXL4Q9UKA2 621 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 ANKRD12Q6UB98 2062 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 PCSK5Q92824 1860 aa17.14■□□□□ 0.33
SQSTM1-204ENST00000453046 PTPN13Q12923 2485 aa17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 G3V2L1 256 aa17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 H0YGG7 62 aa17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 C8GP07360 202 aa17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 GNLYP22749 145 aa17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 ATP5F1P24539 256 aaPredicted RBP17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 VARSP26640 1264 aaKnown RBP17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 LSP1P33241 339 aa17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 UQCRFS1P47985 274 aa17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 ARF3P61204 181 aaPredicted RBP17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 PRDX1Q06830 199 aaKnown RBP17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 ASPHQ12797 758 aa17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 TSNQ15631 228 aaKnown RBP17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 UBE2R2Q712K3 238 aaPredicted RBP17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 SPNS2Q8IVW8 549 aa17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 ZADH2Q8N4Q0 377 aa17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 FBXO15Q8NCQ5 510 aaPredicted RBP17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 ZNF480Q8WV37 535 aa17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 RERGQ96A58 199 aaPredicted RBP17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 MIEF2Q96C03 454 aa17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 CRB3Q9BUF7 120 aa17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 YIPF2Q9BWQ6 316 aa17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 SEMA3GQ9NS98 782 aa17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 NUDT4Q9NZJ9 180 aa17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 CPSF2Q9P2I0 782 aaKnown RBP17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 ZNF282Q9UDV7 671 aaPredicted RBP17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 RNF112Q9ULX5 631 aa17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 DOPEY2Q9Y3R5 2298 aa17.13■□□□□ 0.33
SQSTM1-204ENST00000453046 LRRK2Q5S007 2527 aa17.12■□□□□ 0.33
SQSTM1-204ENST00000453046 E7ENX8 843 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms