RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 CEP78Q5JTW2 689 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 FAM46CQ5VWP2 391 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 TMEM268Q5VZI3 342 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 CES5AQ6NT32 575 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 EFCAB12Q6NXP0 572 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 CCDC137Q6PK04 289 aaKnown RBP4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 FIGLAQ6QHK4 219 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 SIGLEC15Q6ZMC9 328 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 LARP4Q71RC2 724 aaKnown RBP eCLIP4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 GRASPQ7Z6J2 395 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 CCDC190Q86UF4 302 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 ZC3HC1Q86WB0 502 aaKnown RBP4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 MEX3DQ86XN8 651 aaKnown RBP4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 ADGRF4Q8IZF3 695 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 FAM58AQ8N1B3 248 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 ARHGAP24Q8N264 748 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 SLC25A41Q8N5S1 370 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 LRRC17Q8N6Y2 441 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 OR4K14Q8NGD5 310 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 OR5D13Q8NGL4 314 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 GPX8Q8TED1 209 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 GIPC3Q8TF64 312 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 CHPT1Q8WUD6 406 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 TMEM170AQ8WVE7 144 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 LPIN2Q92539 896 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 RAB1CQ92928 201 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 TNFRSF14Q92956 283 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 RSPRY1Q96DX4 576 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 SLC47A1Q96FL8 570 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 PGBD1Q96JS3 809 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 GPR78Q96P69 363 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 RASL10BQ96S79 203 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 PNKPQ96T60 521 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 MTERF1Q99551 399 aaKnown RBP4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 MXRA8Q9BRK3 442 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 UBAC1Q9BSL1 405 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 PCGF1Q9BSM1 259 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 SHCBP1LQ9BZQ2 653 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 ENKD1Q9H0I2 346 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 MEGF9Q9H1U4 602 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 SLC6A15Q9H2J7 730 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 CALHM2Q9HA72 323 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 Q9N2J8 555 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 MYNNQ9NPC7 610 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 ABHD10Q9NUJ1 306 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 SMPD4Q9NXE4 827 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 SLC2A8Q9NY64 477 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 PPP4R1LQ9P1A2 415 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 ERRFI1Q9UJM3 462 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 CDH9Q9ULB4 789 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 TBC1D24Q9ULP9 559 aa4.21□□□□□ -1.74
HMGB3P21-201ENST00000452483 A0A1W2PPQ1 181 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 A0A1W2PS29 197 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 ESYT2A0FGR8 921 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 TMEM120BA0PK00 339 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 METTL21EPA6NDL7 271 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 TRPC5OSA6NMA1 111 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 A8MXQ7 604 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 E7ENX8 843 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 WWP2O00308 870 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 EEF2KO00418 725 aaKnown RBP4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 NR5A2O00482 541 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 PDXKO00764 312 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 KLF11O14901 512 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 ARPC3O15145 178 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 MDM4O15151 490 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 TRIAP1O43715 76 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 CALUO43852 315 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 NME2P1O60361 137 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 B4GALT4O60513 344 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 STBD1O95210 358 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 LCA5LO95447 670 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 CHRNGP07510 517 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 PLEKP08567 350 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 ADRB1P08588 477 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 MCF2P10911 925 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 FCGR1AP12314 374 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 GCSHP23434 173 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 DDX6P26196 483 aaKnown RBP eCLIP4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 ELAVL4P26378 380 aaKnown RBP4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 DUSP1P28562 367 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 MAGEA9P43362 315 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 NAMPTP43490 491 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 LHX1P48742 406 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 SLC26A2P50443 739 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 PPT1P50897 306 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 NAPAP54920 295 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 RRADP55042 308 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 STX17P56962 302 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 VBP1P61758 197 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 RAB11AP62491 216 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 PPP2CBP62714 309 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 PPP2CAP67775 309 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 KDSRQ06136 332 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 SPOCK1Q08629 439 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 ENPP2Q13822 863 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 DMC1Q14565 340 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 TGFBIQ15582 683 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 RAB11BQ15907 218 aa4.2□□□□□ -1.74
HMGB3P21-201ENST00000452483 SNCBQ16143 134 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms