RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 TMEM30BQ3MIR4 351 aa3.46□□□□□ -1.86
VPS8-211ENST00000452140 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.46□□□□□ -1.86
VPS8-211ENST00000452140 TMEM270Q6UE05 265 aa3.46□□□□□ -1.86
VPS8-211ENST00000452140 DHRS11Q6UWP2 260 aa3.46□□□□□ -1.86
VPS8-211ENST00000452140 SIGLEC15Q6ZMC9 328 aa3.46□□□□□ -1.86
VPS8-211ENST00000452140 Q6ZRP5 223 aa3.46□□□□□ -1.86
VPS8-211ENST00000452140 ZNF713Q8N859 430 aaPredicted RBP3.46□□□□□ -1.86
VPS8-211ENST00000452140 OR6S1Q8NH40 331 aa3.46□□□□□ -1.86
VPS8-211ENST00000452140 OR2T6Q8NHC8 308 aa3.46□□□□□ -1.86
VPS8-211ENST00000452140 MRGPRDQ8TDS7 321 aa3.46□□□□□ -1.86
VPS8-211ENST00000452140 RFT1Q96AA3 541 aa3.46□□□□□ -1.86
VPS8-211ENST00000452140 AP2M1Q96CW1 435 aa3.46□□□□□ -1.86
VPS8-211ENST00000452140 FAM218AQ96MZ4 157 aa3.46□□□□□ -1.86
VPS8-211ENST00000452140 DUX3Q96PT4 197 aa3.46□□□□□ -1.86
VPS8-211ENST00000452140 PANX3Q96QZ0 392 aa3.46□□□□□ -1.86
VPS8-211ENST00000452140 CLEC7AQ9BXN2 247 aa3.46□□□□□ -1.86
VPS8-211ENST00000452140 DGCR6LQ9BY27 220 aa3.46□□□□□ -1.86
VPS8-211ENST00000452140 ZNF350Q9GZX5 532 aa3.46□□□□□ -1.86
VPS8-211ENST00000452140 UBQLN3Q9H347 655 aa3.46□□□□□ -1.86
VPS8-211ENST00000452140 C10orf88Q9H8K7 445 aa3.46□□□□□ -1.86
VPS8-211ENST00000452140 RPF1Q9H9Y2 349 aaKnown RBP3.46□□□□□ -1.86
VPS8-211ENST00000452140 PANK4Q9NVE7 773 aa3.46□□□□□ -1.86
VPS8-211ENST00000452140 HACD3Q9P035 362 aa3.46□□□□□ -1.86
VPS8-211ENST00000452140 KLHL8Q9P2G9 620 aaPredicted RBP3.46□□□□□ -1.86
VPS8-211ENST00000452140 IL36AQ9UHA7 158 aa3.46□□□□□ -1.86
VPS8-211ENST00000452140 PA2G4Q9UQ80 394 aaKnown RBP3.46□□□□□ -1.86
VPS8-211ENST00000452140 TCF20Q9UGU0 1960 aaKnown RBP3.45□□□□□ -1.86
VPS8-211ENST00000452140 A0A0B4J203 849 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 ANKDD1BA6NHY2 528 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 SDR42E2A6NKP2 422 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 CYTIPO60759 359 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 SAP30O75446 220 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 GOSR1O95249 250 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 DUS4LO95620 317 aaKnown RBP3.45□□□□□ -1.86
VPS8-211ENST00000452140 IGLV1-44P01699 117 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 MT-ND2P03891 347 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 VTNP04004 478 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 SBK2P0C263 348 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 C8orf89P0DMQ9 161 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 COPB2P35606 906 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 FKBP1BP68106 108 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 TRA2AQ13595 282 aaKnown RBP eCLIP3.45□□□□□ -1.86
VPS8-211ENST00000452140 DUSP5Q16690 384 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 KBTBD12Q3ZCT8 623 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 KRTAP5-11Q6L8G4 156 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 COX8CQ7Z4L0 72 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 LSMEM2Q8N112 164 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 PRSS35Q8N3Z0 413 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 FAM89BQ8N5H3 189 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 ADAD2Q8NCV1 583 aaKnown RBP3.45□□□□□ -1.86
VPS8-211ENST00000452140 CKAP2Q8WWK9 683 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 ART5Q96L15 291 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 RBM4Q9BWF3 364 aaKnown RBP3.45□□□□□ -1.86
VPS8-211ENST00000452140 TDRD1Q9BXT4 1180 aaKnown RBP3.45□□□□□ -1.86
VPS8-211ENST00000452140 KRTAP2-2Q9BYT5 123 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 PITPNM3Q9BZ71 974 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 ACPTQ9BZG2 426 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 NACAP1Q9BZK3 213 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 SLC5A7Q9GZV3 580 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 SPHK2Q9NRA0 654 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 POLKQ9UBT6 870 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 TMED7Q9Y3B3 224 aa3.45□□□□□ -1.86
VPS8-211ENST00000452140 NOTCH4Q99466 2003 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 A0A087WZ39 114 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 A0A1W2PRV1 198 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 LRRD1A4D1F6 860 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 C15orf61A6NNL5 157 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 MAGEB2O15479 319 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 ATP9AO75110 1047 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 KRT33AO76009 404 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 CALCAP01258 141 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 UROSP10746 265 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 IER3P46695 156 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 SNU13P55769 128 aaKnown RBP3.44□□□□□ -1.86
VPS8-211ENST00000452140 CETN1Q12798 172 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 EFTUD2Q15029 972 aaKnown RBP eCLIP3.44□□□□□ -1.86
VPS8-211ENST00000452140 LRRC37A5PQ49AS3 106 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 SLC39A12Q504Y0 691 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 FGD3Q5JSP0 725 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 OTUD3Q5T2D3 398 aaPredicted RBP3.44□□□□□ -1.86
VPS8-211ENST00000452140 GFI1BQ5VTD9 330 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 PRAMEF8Q5VWM4 474 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 FIP1L1Q6UN15 594 aaKnown RBP3.44□□□□□ -1.86
VPS8-211ENST00000452140 CATSPERDQ86XM0 798 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 MAPK15Q8TD08 544 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 ZNRF4Q8WWF5 429 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 SNRNP40Q96DI7 357 aaKnown RBP3.44□□□□□ -1.86
VPS8-211ENST00000452140 CDKN2AIPNLQ96HQ2 116 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 RASL10BQ96S79 203 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 PRMT1Q99873 361 aaKnown RBP3.44□□□□□ -1.86
VPS8-211ENST00000452140 IDI2Q9BXS1 227 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 BARHL1Q9BZE3 327 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 RNPEPL1Q9HAU8 725 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 IL1RAPL2Q9NP60 686 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 MRPL17Q9NRX2 175 aaKnown RBP3.44□□□□□ -1.86
VPS8-211ENST00000452140 LEF1Q9UJU2 399 aaPredicted RBP3.44□□□□□ -1.86
VPS8-211ENST00000452140 FBXL4Q9UKA2 621 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 ELF5Q9UKW6 265 aaPredicted RBP3.44□□□□□ -1.86
VPS8-211ENST00000452140 PLCL2Q9UPR0 1127 aa3.44□□□□□ -1.86
VPS8-211ENST00000452140 CCDC162PA2VCL2 907 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms