RNA–Protein interactions for RNA: ENST00000451653.5

SEC22C-211, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best)

Gene SEC22C, Length 5,955 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-211ENST00000451653 NRIP1P48552 1158 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 RPL6Q02878 288 aaKnown RBP8.04□□□□□ -1.12
SEC22C-211ENST00000451653 LCP2Q13094 533 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 DPYSL2Q16555 572 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 VARS2Q5ST30 1063 aaKnown RBP8.04□□□□□ -1.12
SEC22C-211ENST00000451653 CARD17Q5XLA6 110 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 GDPD4Q6W3E5 623 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 SLC26A9Q7LBE3 791 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 ZNF572Q7Z3I7 529 aaPredicted RBP8.04□□□□□ -1.12
SEC22C-211ENST00000451653 TCEANCQ8N8B7 351 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 HNRNPABQ99729 332 aaKnown RBP8.04□□□□□ -1.12
SEC22C-211ENST00000451653 FXYD6Q9H0Q3 95 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 UCKL1Q9NWZ5 548 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 LAMP5Q9UJQ1 280 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 CA12O43570 354 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 CNOT4O95628 575 aaKnown RBP8.04□□□□□ -1.12
SEC22C-211ENST00000451653 SLC16A8O95907 504 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 STATHP02808 62 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 SYPP08247 313 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 HTR1AP08908 422 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 COL6A2P12110 1019 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 IL1R2P27930 398 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 GGT2P36268 569 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 CSKP41240 450 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 PTGER3P43115 390 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 PSPHP78330 225 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 CREB5Q02930 508 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 BLMHQ13867 455 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 SLBPQ14493 270 aaKnown RBP eCLIP8.04□□□□□ -1.12
SEC22C-211ENST00000451653 GNMTQ14749 295 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 SYT16Q17RD7 645 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 TIGD5Q53EQ6 642 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 CLEC6AQ6EIG7 209 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 SLC16A9Q7RTY1 509 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 DPY19L4Q7Z388 723 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 C6orf120Q7Z4R8 191 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 P2RY8Q86VZ1 359 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 SVOPLQ8N434 492 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 FTMTQ8N4E7 242 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 TEPSINQ96N21 525 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 CNTN3Q9P232 1028 aa8.04□□□□□ -1.12
SEC22C-211ENST00000451653 LAMB4A4D0S4 1761 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 ISPDA4D126 451 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 PIP5K1BO14986 540 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 TGDSO95455 350 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 RAB36O95755 333 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 RPLP0P05388 317 aaKnown RBP8.03□□□□□ -1.12
SEC22C-211ENST00000451653 PCSK2P16519 638 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 CYP3A5P20815 502 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 MATN1P21941 496 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 FUT4P22083 530 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 CCND3P30281 292 aaPredicted RBP8.03□□□□□ -1.12
SEC22C-211ENST00000451653 RBMXP38159 391 aaKnown RBP8.03□□□□□ -1.12
SEC22C-211ENST00000451653 RAB28P51157 221 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 PON3Q15166 354 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 TAF1AQ15573 450 aaPredicted RBP8.03□□□□□ -1.12
SEC22C-211ENST00000451653 VMACQ2NL98 169 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 CTU1Q7Z7A3 348 aaKnown RBP8.03□□□□□ -1.12
SEC22C-211ENST00000451653 UBQLNLQ8IYU4 475 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 METTL27Q8N6F8 245 aaPredicted RBP8.03□□□□□ -1.12
SEC22C-211ENST00000451653 OR9K2Q8NGE7 335 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 OR10A6Q8NH74 314 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 IRF7Q92985 503 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 SH3YL1Q96HL8 342 aaPredicted RBP8.03□□□□□ -1.12
SEC22C-211ENST00000451653 NEDD4LQ96PU5 975 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 EIF2B4Q9UI10 523 aaKnown RBP8.03□□□□□ -1.12
SEC22C-211ENST00000451653 UTS2RQ9UKP6 389 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 ASB3Q9Y575 518 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 KCNU1A8MYU2 1149 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 J3QLW9 94 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 CXCR6O00574 342 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 TGFB1P01137 390 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 GNB3P16520 340 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 ZNF19P17023 458 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 BMP8BP34820 402 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 MSX2P35548 267 aaPredicted RBP8.03□□□□□ -1.12
SEC22C-211ENST00000451653 SLC15A1P46059 708 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 NDST2P52849 883 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 OR2B6P58173 313 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 FXYD6P3P58550 94 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 MPP1Q00013 466 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 SF3B4Q15427 424 aaKnown RBP eCLIP8.03□□□□□ -1.122e-6■■■■■ 27.9
SEC22C-211ENST00000451653 MBLAC2Q68D91 279 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 KIAA0895LQ68EN5 471 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 TTLL10Q6ZVT0 673 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 BMP8AQ7Z5Y6 402 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 ZDHHC21Q8IVQ6 265 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 TIGD4Q8IY51 512 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 TOMM5Q8N4H5 51 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 MSL3Q8N5Y2 521 aaKnown RBP8.03□□□□□ -1.12
SEC22C-211ENST00000451653 LSM14AQ8ND56 463 aaKnown RBP8.03□□□□□ -1.12
SEC22C-211ENST00000451653 CYB5D2Q8WUJ1 264 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 TREX2Q9BQ50 279 aaPredicted RBP8.03□□□□□ -1.12
SEC22C-211ENST00000451653 GBA3Q9H227 469 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 TOR3AQ9H497 397 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 ZNF701Q9NV72 531 aaPredicted RBP8.03□□□□□ -1.12
SEC22C-211ENST00000451653 TNFRSF10DQ9UBN6 386 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 REV1Q9UBZ9 1251 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 FZD10Q9ULW2 581 aa8.03□□□□□ -1.12
SEC22C-211ENST00000451653 SH2B3Q9UQQ2 575 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms