RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 KLHL41O60662 606 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 WFS1O76024 890 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 BMP10O95393 424 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 S100BP04271 92 aaPredicted RBP9.15□□□□□ -0.94
USP54-207ENST00000451492 PRR35P0CG20 571 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 ITGAMP11215 1152 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 CD1DP15813 335 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 STMN1P16949 149 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 STX2P32856 288 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 GP5P40197 560 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 MAGEA4P43358 317 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 HSPA7P48741 367 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 ARG2P78540 354 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 GUCY2DQ02846 1103 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 CAV1Q03135 178 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 RGS1Q08116 209 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 CDC16Q13042 620 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 UBAP2LQ14157 1087 aaKnown RBP9.15□□□□□ -0.94
USP54-207ENST00000451492 PCOLCEQ15113 449 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 TGFBIQ15582 683 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 OR4D1Q15615 310 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 TOR1AIP1Q5JTV8 583 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 UBAP2Q5T6F2 1119 aaKnown RBP9.15□□□□□ -0.94
USP54-207ENST00000451492 ATG9BQ674R7 924 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 B3GNTL1Q67FW5 361 aaPredicted RBP9.15□□□□□ -0.94
USP54-207ENST00000451492 NDUFAF7Q7L592 441 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.15□□□□□ -0.94
USP54-207ENST00000451492 SNX31Q8N9S9 440 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 ANKRD53Q8N9V6 530 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 PRR7Q8TB68 274 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 DNAJB14Q8TBM8 379 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 TSLPQ969D9 159 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 NACC2Q96BF6 587 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 TM4SF19Q96DZ7 209 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 THAP11Q96EK4 314 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 PDLIM5Q96HC4 596 aaKnown RBP9.15□□□□□ -0.94
USP54-207ENST00000451492 GPR22Q99680 433 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 AIF1LQ9BQI0 150 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 TMEM79Q9BSE2 394 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 MCMBPQ9BTE3 642 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 SLC29A3Q9BZD2 475 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 TGIF2Q9GZN2 237 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 PELI2Q9HAT8 420 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 POPDC3Q9HBV1 291 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 LRRC4CQ9HCJ2 640 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 RIC8BQ9NVN3 520 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 PLA2G3Q9NZ20 509 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 CD274Q9NZQ7 290 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 RNF112Q9ULX5 631 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 FLNCQ14315 2725 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 KCNE1BA0A087WTH5 132 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 TCP11X1B4DZS4 312 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 SUPT3HB4E1H0 165 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 C4orf51C9J302 202 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 CCNT2O60583 730 aaKnown RBP9.14□□□□□ -0.95
USP54-207ENST00000451492 DNAJB6O75190 326 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 SUPT3HO75486 399 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 AGFG2O95081 481 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 ALOX12P18054 663 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 SPRP35270 261 aaPredicted RBP9.14□□□□□ -0.95
USP54-207ENST00000451492 SCTRP47872 440 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 SOX8P57073 446 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 RAB10P61026 200 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 CDKL1Q00532 357 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 RELAQ04206 551 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 ZNF33BQ06732 778 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 SRSF1Q07955 248 aaKnown RBP eCLIP9.14□□□□□ -0.95
USP54-207ENST00000451492 SLBPQ14493 270 aaKnown RBP eCLIP9.14□□□□□ -0.95
USP54-207ENST00000451492 HERC3Q15034 1050 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 EIF2S3LQ2VIR3 472 aaKnown RBP9.14□□□□□ -0.95
USP54-207ENST00000451492 BTBD16Q32M84 506 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 FCRLBQ6BAA4 426 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 NXPE4Q6UWF7 544 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 ISLR2Q6UXK2 745 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 Q6ZS92 163 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 CPEB2Q7Z5Q1 589 aaKnown RBP9.14□□□□□ -0.95
USP54-207ENST00000451492 GPSM1Q86YR5 675 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 FAM26EQ8N5C1 309 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 GALNT11Q8NCW6 608 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 CATSPER1Q8NEC5 780 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 ABHD11Q8NFV4 315 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 OR4K1Q8NGD4 311 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 PPP4R1Q8TF05 950 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 RHBDF1Q96CC6 855 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 DERL2Q9GZP9 239 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 KLHL31Q9H511 634 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 ALG9Q9H6U8 611 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 C19orf25Q9UFG5 118 aaPredicted RBP9.14□□□□□ -0.95
USP54-207ENST00000451492 ZFP69BQ9UJL9 534 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 NTNG1Q9Y2I2 539 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 COPG1Q9Y678 874 aaKnown RBP9.14□□□□□ -0.95
USP54-207ENST00000451492 KCNE2Q9Y6J6 123 aa9.14□□□□□ -0.95
USP54-207ENST00000451492 DYTNA2CJ06 578 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 BLACEA4D250 179 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 A8MUI8 341 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 UBXN8O00124 270 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 TAPBPO15533 448 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 CHST10O43529 356 aa9.13□□□□□ -0.95
USP54-207ENST00000451492 GALR3O60755 368 aaPredicted RBP9.13□□□□□ -0.95
USP54-207ENST00000451492 B4GALT2O60909 372 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms