RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 CAV1Q03135 178 aa14.43□□□□□ -0.1
CHD3-205ENST00000449744 USP10Q14694 798 aaKnown RBP14.43□□□□□ -0.1
CHD3-205ENST00000449744 RBBP5Q15291 538 aaKnown RBP14.43□□□□□ -0.1
CHD3-205ENST00000449744 TSNQ15631 228 aaKnown RBP14.43□□□□□ -0.1
CHD3-205ENST00000449744 SYT10Q6XYQ8 523 aa14.43□□□□□ -0.1
CHD3-205ENST00000449744 C3orf62Q6ZUJ4 267 aa14.43□□□□□ -0.1
CHD3-205ENST00000449744 ABHD13Q7L211 337 aa14.43□□□□□ -0.1
CHD3-205ENST00000449744 CPEB2Q7Z5Q1 589 aaKnown RBP14.43□□□□□ -0.1
CHD3-205ENST00000449744 PDSS2Q86YH6 399 aa14.43□□□□□ -0.1
CHD3-205ENST00000449744 C17orf53Q8N3J3 647 aaPredicted RBP14.43□□□□□ -0.1
CHD3-205ENST00000449744 ZNF740Q8NDX6 193 aa14.43□□□□□ -0.1
CHD3-205ENST00000449744 CATSPER1Q8NEC5 780 aa14.43□□□□□ -0.1
CHD3-205ENST00000449744 ANKRD49Q8WVL7 239 aa14.43□□□□□ -0.1
CHD3-205ENST00000449744 PSMF1Q92530 271 aa14.43□□□□□ -0.1
CHD3-205ENST00000449744 PEX11GQ96HA9 241 aa14.43□□□□□ -0.1
CHD3-205ENST00000449744 CPNE1Q99829 537 aa14.43□□□□□ -0.1
CHD3-205ENST00000449744 GRHL1Q9NZI5 618 aa14.43□□□□□ -0.1
CHD3-205ENST00000449744 ZFP69BQ9UJL9 534 aa14.43□□□□□ -0.1
CHD3-205ENST00000449744 MTO1Q9Y2Z2 717 aaKnown RBP14.43□□□□□ -0.1
CHD3-205ENST00000449744 LRRK2Q5S007 2527 aa14.43□□□□□ -0.1
CHD3-205ENST00000449744 IGHV3-20A0A0C4DH32 117 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 ANKUB1A6NFN9 424 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 SEC24DO94855 1032 aaPredicted RBP14.42□□□□□ -0.1
CHD3-205ENST00000449744 WDR47O94967 919 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 CBX6O95503 412 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 CELA2AP08217 269 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 GSTA2P09210 222 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 GP1BBP13224 206 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 ALOX12P18054 663 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 SOX11P35716 441 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 EFNA3P52797 238 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 PLTPP55058 493 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 REEP5Q00765 189 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 BTBD16Q32M84 506 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 DEFB134Q4QY38 66 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 ABHD17BQ5VST6 288 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 NXPE4Q6UWF7 544 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 LANCL3Q6ZV70 420 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 CCDC25Q86WR0 208 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 CTAGE3PQ8IX95 158 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 TRPV3Q8NET8 790 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 OR1N1Q8NGS0 311 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 NT5CQ8TCD5 201 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 SSC4DQ8WTU2 575 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 MOCOSQ96EN8 888 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 IMMP1LQ96LU5 166 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 OR1F2PQ96R84 312 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 RBCK1Q9BYM8 510 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.42□□□□□ -0.1
CHD3-205ENST00000449744 SPNS1Q9H2V7 528 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 CAB39LQ9H9S4 337 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 PLA2G3Q9NZ20 509 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 TEKT2Q9UIF3 430 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 NTNG1Q9Y2I2 539 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 RP1L1Q8IWN7 2480 aaPredicted RBP14.42□□□□□ -0.1
CHD3-205ENST00000449744 ESPL1Q14674 2120 aa14.42□□□□□ -0.1
CHD3-205ENST00000449744 SCN3AQ9NY46 2000 aa14.41□□□□□ -0.1
CHD3-205ENST00000449744 TRAV17A0A0B4J275 112 aa14.41□□□□□ -0.1
CHD3-205ENST00000449744 TCRBV9S1A1TA0A576 114 aa14.41□□□□□ -0.1
CHD3-205ENST00000449744 NCF1BA6NI72 391 aaPredicted RBP14.41□□□□□ -0.1
CHD3-205ENST00000449744 NCF1CA8MVU1 366 aaPredicted RBP14.41□□□□□ -0.1
CHD3-205ENST00000449744 CXorf49A8MYA2 514 aaPredicted RBP14.41□□□□□ -0.1
CHD3-205ENST00000449744 GALR3O60755 368 aaPredicted RBP14.41□□□□□ -0.1
CHD3-205ENST00000449744 SEMA7AO75326 666 aa14.41□□□□□ -0.1
CHD3-205ENST00000449744 H2AFYO75367 372 aaKnown RBP14.41□□□□□ -0.1
CHD3-205ENST00000449744 CDC123O75794 336 aaPredicted RBP14.41□□□□□ -0.1
CHD3-205ENST00000449744 ZNF888P0CJ79 500 aaPredicted RBP14.41□□□□□ -0.1
CHD3-205ENST00000449744 ITGAMP11215 1152 aa14.41□□□□□ -0.1
CHD3-205ENST00000449744 NCF1P14598 390 aaPredicted RBP14.41□□□□□ -0.1
CHD3-205ENST00000449744 STMN1P16949 149 aa14.41□□□□□ -0.1
CHD3-205ENST00000449744 JAK1P23458 1154 aa14.41□□□□□ -0.1
CHD3-205ENST00000449744 GP5P40197 560 aa14.41□□□□□ -0.1
CHD3-205ENST00000449744 ACTN3Q08043 901 aaPredicted RBP14.41□□□□□ -0.1
CHD3-205ENST00000449744 FAM180AQ6UWF9 173 aa14.41□□□□□ -0.1
CHD3-205ENST00000449744 CYS1Q717R9 158 aa14.41□□□□□ -0.1
CHD3-205ENST00000449744 ANKRD37Q7Z713 158 aa14.41□□□□□ -0.1
CHD3-205ENST00000449744 AFAP1L2Q8N4X5 818 aa14.41□□□□□ -0.1
CHD3-205ENST00000449744 OR5T3Q8NGG3 340 aa14.41□□□□□ -0.1
CHD3-205ENST00000449744 GRHL3Q8TE85 626 aa14.41□□□□□ -0.1
CHD3-205ENST00000449744 HAS2Q92819 552 aa14.41□□□□□ -0.1
CHD3-205ENST00000449744 RHBDF1Q96CC6 855 aa14.41□□□□□ -0.1
CHD3-205ENST00000449744 MAGEB10Q96LZ2 347 aaPredicted RBP14.41□□□□□ -0.1
CHD3-205ENST00000449744 PSMG3-AS1Q96PY0 264 aa14.41□□□□□ -0.1
CHD3-205ENST00000449744 RBBP8Q99708 897 aa14.41□□□□□ -0.1
CHD3-205ENST00000449744 MCMBPQ9BTE3 642 aa14.41□□□□□ -0.1
CHD3-205ENST00000449744 UNKQ9C0B0 810 aaKnown RBP14.41□□□□□ -0.1
CHD3-205ENST00000449744 DERL2Q9GZP9 239 aa14.41□□□□□ -0.1
CHD3-205ENST00000449744 OR2W5A6NFC9 320 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 FAM159BA6NKW6 160 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 A8MUI8 341 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 PHGDHO43175 533 aaKnown RBP14.4□□□□□ -0.1
CHD3-205ENST00000449744 CHST10O43529 356 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 CCDC166P0CW27 439 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 C1GALT1C1LP0DN25 315 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 GNAZP19086 355 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 SPRP35270 261 aaPredicted RBP14.4□□□□□ -0.1
CHD3-205ENST00000449744 HNF4AP41235 474 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 GDF5P43026 501 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 ATP6V0D1P61421 351 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 OLR1P78380 273 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms